RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 NEK4P51957 841 aa10.87□□□□□ -0.67
CSMD1-218ENST00000635120 GOLGA6L10A6NI86 522 aa10.87□□□□□ -0.67
CSMD1-218ENST00000635120 CT47B1P0C2W7 299 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-218ENST00000635120 HMGN5P82970 282 aaKnown RBP10.87□□□□□ -0.67
CSMD1-218ENST00000635120 TMEM132AQ24JP5 1023 aa10.87□□□□□ -0.67
CSMD1-218ENST00000635120 ZNF396Q96N95 335 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-218ENST00000635120 PRPF40AO75400 957 aaKnown RBP10.87□□□□□ -0.67
CSMD1-218ENST00000635120 RABEP1Q15276 862 aa10.86□□□□□ -0.67
CSMD1-218ENST00000635120 BRD4O60885 1362 aaPredicted RBP10.86□□□□□ -0.67
CSMD1-218ENST00000635120 NUTM2GQ5VZR2 741 aa10.86□□□□□ -0.67
CSMD1-218ENST00000635120 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
CSMD1-218ENST00000635120 MYOM3Q5VTT5 1437 aa10.86□□□□□ -0.67
CSMD1-218ENST00000635120 FILIP1LQ4L180 1135 aa10.86□□□□□ -0.67
CSMD1-218ENST00000635120 C1orf115Q9H7X2 142 aa10.86□□□□□ -0.67
CSMD1-218ENST00000635120 STK38Q15208 465 aa10.86□□□□□ -0.67
CSMD1-218ENST00000635120 DNAJC2Q99543 621 aaKnown RBP10.86□□□□□ -0.67
CSMD1-218ENST00000635120 KIF21BO75037 1637 aa10.85□□□□□ -0.67
CSMD1-218ENST00000635120 HSP90AB3PQ58FF7 597 aa10.85□□□□□ -0.67
CSMD1-218ENST00000635120 CENPHQ9H3R5 247 aa10.85□□□□□ -0.67
CSMD1-218ENST00000635120 AKNAQ7Z591 1439 aa10.85□□□□□ -0.67
CSMD1-218ENST00000635120 TBC1D2BQ9UPU7 963 aa10.85□□□□□ -0.67
CSMD1-218ENST00000635120 ERLIN2O94905 339 aa10.85□□□□□ -0.67
CSMD1-218ENST00000635120 KRT18P05783 430 aaKnown RBP10.85□□□□□ -0.67
CSMD1-218ENST00000635120 MPNDQ8N594 471 aa10.85□□□□□ -0.67
CSMD1-218ENST00000635120 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 ZNHIT6Q9NWK9 470 aaKnown RBP10.84□□□□□ -0.67
CSMD1-218ENST00000635120 FGD6Q6ZV73 1430 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 KIAA0754O94854 1291 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 RRBP1Q9P2E9 1410 aaKnown RBP10.84□□□□□ -0.67
CSMD1-218ENST00000635120 SLC3A2P08195 630 aaKnown RBP10.84□□□□□ -0.67
CSMD1-218ENST00000635120 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 TNMDQ9H2S6 317 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 CABP2Q9NPB3 220 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 CCDC192P0DO97 292 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 ENOX2Q16206 610 aaKnown RBP10.84□□□□□ -0.67
CSMD1-218ENST00000635120 NLRP2Q9NX02 1062 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
CSMD1-218ENST00000635120 ZRSR2Q15696 482 aaKnown RBP10.84□□□□□ -0.67
CSMD1-218ENST00000635120 SYCP1Q15431 976 aa10.83□□□□□ -0.68
CSMD1-218ENST00000635120 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
CSMD1-218ENST00000635120 HIP1O00291 1037 aa10.83□□□□□ -0.68
CSMD1-218ENST00000635120 PPFIBP1Q86W92 1011 aa10.83□□□□□ -0.68
CSMD1-218ENST00000635120 SURF6O75683 361 aaKnown RBP10.83□□□□□ -0.68
CSMD1-218ENST00000635120 SERPINC1P01008 464 aa10.83□□□□□ -0.68
CSMD1-218ENST00000635120 CCAR1Q8IX12 1150 aaKnown RBP10.83□□□□□ -0.68
CSMD1-218ENST00000635120 ME1P48163 572 aa10.83□□□□□ -0.68
CSMD1-218ENST00000635120 PAF1Q8N7H5 531 aa10.83□□□□□ -0.68
CSMD1-218ENST00000635120 NEFHP12036 1026 aa10.83□□□□□ -0.68
CSMD1-218ENST00000635120 MCM2P49736 904 aa10.83□□□□□ -0.68
CSMD1-218ENST00000635120 STIM1Q13586 685 aa10.82□□□□□ -0.68
CSMD1-218ENST00000635120 ADAMTS8Q9UP79 889 aa10.82□□□□□ -0.68
CSMD1-218ENST00000635120 JMYQ8N9B5 988 aa10.82□□□□□ -0.68
CSMD1-218ENST00000635120 FAM193AP78312 1265 aa10.82□□□□□ -0.68
CSMD1-218ENST00000635120 SEPT7Q16181 437 aaKnown RBP10.82□□□□□ -0.68
CSMD1-218ENST00000635120 FYCO1Q9BQS8 1478 aa10.82□□□□□ -0.68
CSMD1-218ENST00000635120 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
CSMD1-218ENST00000635120 UQCRHLA0A096LP55 91 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 UQCRHP07919 91 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 STK3Q13188 491 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 KIF6Q6ZMV9 814 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 FAM177A1Q8N128 213 aaPredicted RBP10.81□□□□□ -0.68
CSMD1-218ENST00000635120 PTPRGP23470 1445 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 PIP4K2AP48426 406 aaPredicted RBP10.81□□□□□ -0.68
CSMD1-218ENST00000635120 GGNBP2Q9H3C7 697 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 DEF6Q9H4E7 631 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 GNAI3P08754 354 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 CCDC112Q8NEF3 446 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 CCDC30Q5VVM6 783 aa10.81□□□□□ -0.68
CSMD1-218ENST00000635120 SMG6Q86US8 1419 aaKnown RBP10.81□□□□□ -0.68
CSMD1-218ENST00000635120 ATP2B2Q01814 1243 aa10.8□□□□□ -0.68
CSMD1-218ENST00000635120 LUC7LQ9NQ29 371 aaKnown RBP10.8□□□□□ -0.68
CSMD1-218ENST00000635120 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
CSMD1-218ENST00000635120 DHX37Q8IY37 1157 aaKnown RBP10.8□□□□□ -0.68
CSMD1-218ENST00000635120 NOB1Q9ULX3 412 aaKnown RBP10.8□□□□□ -0.68
CSMD1-218ENST00000635120 TTC39AQ5SRH9 613 aa10.8□□□□□ -0.68
CSMD1-218ENST00000635120 FANCD2Q9BXW9 1451 aa10.8□□□□□ -0.68
CSMD1-218ENST00000635120 ERC1Q8IUD2 1116 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 GNAI2P04899 355 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 UBE2Q2Q8WVN8 375 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 STK11IPQ8N1F8 1099 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 CYP46A1Q9Y6A2 500 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 CCDC181Q5TID7 509 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 ATF3P18847 181 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 MTHFSP49914 203 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 ANKRD62A6NC57 917 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 PRDM10Q9NQV6 1147 aa10.79□□□□□ -0.68
CSMD1-218ENST00000635120 FAM177BA6PVY3 158 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 ZNF428Q96B54 188 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 GAPVD1Q14C86 1478 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 GOLGA6L7A0A1B0GV03 622 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 MAP4K4O95819 1239 aaPredicted RBP10.78□□□□□ -0.68
CSMD1-218ENST00000635120 TRIM22Q8IYM9 498 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 ZHX3Q9H4I2 956 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 WDR33Q9C0J8 1336 aaKnown RBP10.78□□□□□ -0.68
CSMD1-218ENST00000635120 TCP11L2Q8N4U5 519 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 TAX1BP1Q86VP1 789 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 LRRC9Q6ZRR7 1453 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 IQCEQ6IPM2 695 aa10.78□□□□□ -0.68
CSMD1-218ENST00000635120 ERICH4A6NGS2 130 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms