RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 ANKRD26Q9UPS8 1709 aa22.86■■□□□ 1.25
CCNL1-226ENST00000631619 MINK1Q8N4C8 1332 aaPredicted RBP22.86■■□□□ 1.25
CCNL1-226ENST00000631619 CLTCQ00610 1675 aaKnown RBP22.85■■□□□ 1.25
CCNL1-226ENST00000631619 ATAD2Q6PL18 1390 aa22.85■■□□□ 1.25
CCNL1-226ENST00000631619 PRAM1Q96QH2 718 aa22.85■■□□□ 1.25
CCNL1-226ENST00000631619 NLRP1Q9C000 1473 aa22.85■■□□□ 1.25
CCNL1-226ENST00000631619 YTHDC2Q9H6S0 1430 aaKnown RBP22.85■■□□□ 1.25
CCNL1-226ENST00000631619 FYB1O15117 783 aa22.85■■□□□ 1.25
CCNL1-226ENST00000631619 SEC24BO95487 1268 aa22.85■■□□□ 1.25
CCNL1-226ENST00000631619 TSR2Q969E8 191 aaKnown RBP22.84■■□□□ 1.25
CCNL1-226ENST00000631619 U2SURPO15042 1029 aaKnown RBP22.83■■□□□ 1.25
CCNL1-226ENST00000631619 TMPOP42166 694 aaKnown RBP22.82■■□□□ 1.24
CCNL1-226ENST00000631619 TERF2IPQ9NYB0 399 aa22.82■■□□□ 1.24
CCNL1-226ENST00000631619 TRIM35Q9UPQ4 493 aa22.82■■□□□ 1.24
CCNL1-226ENST00000631619 MED14O60244 1454 aa22.82■■□□□ 1.24
CCNL1-226ENST00000631619 FBXO31Q5XUX0 539 aaPredicted RBP22.81■■□□□ 1.24
CCNL1-226ENST00000631619 POGKQ9P215 609 aa22.81■■□□□ 1.24
CCNL1-226ENST00000631619 MVPQ14764 893 aaKnown RBP22.81■■□□□ 1.24
CCNL1-226ENST00000631619 CT47B1P0C2W7 299 aaPredicted RBP22.8■■□□□ 1.24
CCNL1-226ENST00000631619 ZKSCAN2Q63HK3 967 aa22.8■■□□□ 1.24
CCNL1-226ENST00000631619 PDZRN3Q9UPQ7 1066 aa22.8■■□□□ 1.24
CCNL1-226ENST00000631619 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
CCNL1-226ENST00000631619 EXOSC9Q06265 439 aaKnown RBP22.79■■□□□ 1.24
CCNL1-226ENST00000631619 RWDD1Q9H446 243 aaPredicted RBP22.77■■□□□ 1.24
CCNL1-226ENST00000631619 DZIP1LQ8IYY4 767 aaKnown RBP22.77■■□□□ 1.24
CCNL1-226ENST00000631619 ARHGEF40Q8TER5 1519 aa22.77■■□□□ 1.24
CCNL1-226ENST00000631619 ZMYM3Q14202 1370 aa22.77■■□□□ 1.24
CCNL1-226ENST00000631619 CDK19Q9BWU1 502 aa22.76■■□□□ 1.23
CCNL1-226ENST00000631619 L1TD1Q5T7N2 865 aaKnown RBP22.75■■□□□ 1.23
CCNL1-226ENST00000631619 FTSJ3Q8IY81 847 aaKnown RBP22.75■■□□□ 1.23
CCNL1-226ENST00000631619 SMC4Q9NTJ3 1288 aa22.75■■□□□ 1.23
CCNL1-226ENST00000631619 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
CCNL1-226ENST00000631619 KIF20BQ96Q89 1820 aa22.75■■□□□ 1.23
CCNL1-226ENST00000631619 SSH1Q8WYL5 1049 aa22.74■■□□□ 1.23
CCNL1-226ENST00000631619 TRIM27P14373 513 aa22.74■■□□□ 1.23
CCNL1-226ENST00000631619 BECN1Q14457 450 aa22.73■■□□□ 1.23
CCNL1-226ENST00000631619 HDGFL2Q7Z4V5 671 aaPredicted RBP22.73■■□□□ 1.23
CCNL1-226ENST00000631619 CABP1Q9NZU7 370 aa22.73■■□□□ 1.23
CCNL1-226ENST00000631619 DIAPH1O60610 1272 aaKnown RBP22.73■■□□□ 1.23
CCNL1-226ENST00000631619 IL16Q14005 1332 aa22.73■■□□□ 1.23
CCNL1-226ENST00000631619 RIPK4P57078 832 aa22.72■■□□□ 1.23
CCNL1-226ENST00000631619 RRAGDQ9NQL2 400 aaPredicted RBP22.71■■□□□ 1.23
CCNL1-226ENST00000631619 FAM69CQ0P6D2 419 aa22.69■■□□□ 1.22
CCNL1-226ENST00000631619 ATF7IPQ6VMQ6 1270 aa22.69■■□□□ 1.22
CCNL1-226ENST00000631619 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
CCNL1-226ENST00000631619 CDC42BPGQ6DT37 1551 aa22.68■■□□□ 1.22
CCNL1-226ENST00000631619 LRRC7Q96NW7 1537 aa22.67■■□□□ 1.22
CCNL1-226ENST00000631619 NOB1Q9ULX3 412 aaKnown RBP22.67■■□□□ 1.22
CCNL1-226ENST00000631619 DDX19BQ9UMR2 479 aa22.67■■□□□ 1.22
CCNL1-226ENST00000631619 FBLN1P23142 703 aa22.66■■□□□ 1.22
CCNL1-226ENST00000631619 ITPRIPQ8IWB1 547 aa22.66■■□□□ 1.22
CCNL1-226ENST00000631619 TBC1D32Q96NH3 1257 aa22.66■■□□□ 1.22
CCNL1-226ENST00000631619 WAPLQ7Z5K2 1190 aa22.66■■□□□ 1.22
CCNL1-226ENST00000631619 DIP2BQ9P265 1576 aa22.65■■□□□ 1.22
CCNL1-226ENST00000631619 FCHSD2O94868 740 aa22.65■■□□□ 1.22
CCNL1-226ENST00000631619 HDAC1Q13547 482 aaPredicted RBP22.65■■□□□ 1.22
CCNL1-226ENST00000631619 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.65■■□□□ 1.22
CCNL1-226ENST00000631619 PNNQ9H307 717 aaKnown RBP22.65■■□□□ 1.22
CCNL1-226ENST00000631619 DLC1Q96QB1 1528 aa22.65■■□□□ 1.22
CCNL1-226ENST00000631619 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
CCNL1-226ENST00000631619 A2ML1A8K2U0 1454 aa22.64■■□□□ 1.22
CCNL1-226ENST00000631619 MAP2P11137 1827 aaKnown RBP22.64■■□□□ 1.22
CCNL1-226ENST00000631619 ANTXR1Q9H6X2 564 aa22.64■■□□□ 1.21
CCNL1-226ENST00000631619 POLKQ9UBT6 870 aa22.64■■□□□ 1.21
CCNL1-226ENST00000631619 SLKQ9H2G2 1235 aaPredicted RBP22.64■■□□□ 1.21
CCNL1-226ENST00000631619 UPF2Q9HAU5 1272 aaKnown RBP22.64■■□□□ 1.21
CCNL1-226ENST00000631619 TMEM57Q8N5G2 664 aa22.63■■□□□ 1.21
CCNL1-226ENST00000631619 ATP7BP35670 1465 aa22.63■■□□□ 1.21
CCNL1-226ENST00000631619 FAM135BQ49AJ0 1406 aa22.63■■□□□ 1.21
CCNL1-226ENST00000631619 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
CCNL1-226ENST00000631619 ZBTB40Q9NUA8 1239 aa22.6■■□□□ 1.21
CCNL1-226ENST00000631619 KIF16BQ96L93 1317 aa22.6■■□□□ 1.21
CCNL1-226ENST00000631619 RIMS2Q9UQ26 1411 aa22.6■■□□□ 1.21
CCNL1-226ENST00000631619 REREQ9P2R6 1566 aa22.6■■□□□ 1.21
CCNL1-226ENST00000631619 TSPOAP1O95153 1857 aa22.59■■□□□ 1.21
CCNL1-226ENST00000631619 AGLP35573 1532 aa22.59■■□□□ 1.21
CCNL1-226ENST00000631619 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
CCNL1-226ENST00000631619 SMC5Q8IY18 1101 aa22.59■■□□□ 1.21
CCNL1-226ENST00000631619 ALDH1L2Q3SY69 923 aa22.58■■□□□ 1.21
CCNL1-226ENST00000631619 GLIPR1L2Q4G1C9 344 aa22.58■■□□□ 1.21
CCNL1-226ENST00000631619 IPO8O15397 1037 aaKnown RBP22.57■■□□□ 1.2
CCNL1-226ENST00000631619 PHACTR3Q96KR7 559 aa22.57■■□□□ 1.2
CCNL1-226ENST00000631619 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
CCNL1-226ENST00000631619 TBC1D2Q9BYX2 928 aa22.56■■□□□ 1.2
CCNL1-226ENST00000631619 PPIP5K1Q6PFW1 1433 aa22.56■■□□□ 1.2
CCNL1-226ENST00000631619 FSD2A1L4K1 749 aa22.55■■□□□ 1.2
CCNL1-226ENST00000631619 HMOX1P09601 288 aa22.55■■□□□ 1.2
CCNL1-226ENST00000631619 EMILIN1Q9Y6C2 1016 aa22.55■■□□□ 1.2
CCNL1-226ENST00000631619 CPSF1Q10570 1443 aaKnown RBP22.55■■□□□ 1.2
CCNL1-226ENST00000631619 GOLGA6L3A6NEY3 463 aa22.55■■□□□ 1.2
CCNL1-226ENST00000631619 NRXN3Q9Y4C0 1643 aa22.55■■□□□ 1.2
CCNL1-226ENST00000631619 XRCC6P12956 609 aaKnown RBP eCLIP22.54■■□□□ 1.2
CCNL1-226ENST00000631619 NFE2L2Q16236 605 aa22.54■■□□□ 1.2
CCNL1-226ENST00000631619 CLCN1P35523 988 aa22.53■■□□□ 1.2
CCNL1-226ENST00000631619 THUMPD2Q9BTF0 503 aaKnown RBP22.53■■□□□ 1.2
CCNL1-226ENST00000631619 EDC4Q6P2E9 1401 aaKnown RBP22.53■■□□□ 1.2
CCNL1-226ENST00000631619 BRPF1P55201 1214 aaPredicted RBP22.53■■□□□ 1.2
CCNL1-226ENST00000631619 WASLO00401 505 aaPredicted RBP22.52■■□□□ 1.2
CCNL1-226ENST00000631619 NME9Q86XW9 330 aa22.52■■□□□ 1.2
CCNL1-226ENST00000631619 IL13P35225 146 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms