RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MLLT3P42568 568 aaPredicted RBP7.14□□□□□ -1.27
LINC00550-201ENST00000629293 ORAI2Q96SN7 254 aa7.14□□□□□ -1.27
LINC00550-201ENST00000629293 GCC2Q8IWJ2 1684 aa7.14□□□□□ -1.27
LINC00550-201ENST00000629293 SOX12O15370 315 aa7.14□□□□□ -1.27
LINC00550-201ENST00000629293 STK26Q9P289 416 aa7.14□□□□□ -1.27
LINC00550-201ENST00000629293 RBM26Q5T8P6 1007 aaKnown RBP7.13□□□□□ -1.27
LINC00550-201ENST00000629293 RGL3Q3MIN7 710 aa7.13□□□□□ -1.27
LINC00550-201ENST00000629293 NWD1Q149M9 1564 aa7.13□□□□□ -1.27
LINC00550-201ENST00000629293 TMEM131LA2VDJ0 1609 aa7.13□□□□□ -1.27
LINC00550-201ENST00000629293 ESCO1Q5FWF5 840 aa7.13□□□□□ -1.27
LINC00550-201ENST00000629293 EP400Q96L91 3159 aa7.12□□□□□ -1.27
LINC00550-201ENST00000629293 NLRP6P59044 892 aa7.12□□□□□ -1.27
LINC00550-201ENST00000629293 RBM6P78332 1123 aaKnown RBP7.12□□□□□ -1.27
LINC00550-201ENST00000629293 USP21Q9UK80 565 aa7.12□□□□□ -1.27
LINC00550-201ENST00000629293 COL16A1Q07092 1604 aaPredicted RBP7.12□□□□□ -1.27
LINC00550-201ENST00000629293 CHD2O14647 1828 aaKnown RBP7.12□□□□□ -1.27
LINC00550-201ENST00000629293 KDM5AP29375 1690 aaKnown RBP7.12□□□□□ -1.27
LINC00550-201ENST00000629293 PIK3R4Q99570 1358 aa7.12□□□□□ -1.27
LINC00550-201ENST00000629293 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.12□□□□□ -1.27
LINC00550-201ENST00000629293 FOXO3O43524 673 aa7.11□□□□□ -1.27
LINC00550-201ENST00000629293 KIF12Q96FN5 646 aa7.11□□□□□ -1.27
LINC00550-201ENST00000629293 LARP6Q9BRS8 491 aaKnown RBP7.11□□□□□ -1.27
LINC00550-201ENST00000629293 KDM4CQ9H3R0 1056 aa7.11□□□□□ -1.27
LINC00550-201ENST00000629293 CABP2Q9NPB3 220 aa7.11□□□□□ -1.27
LINC00550-201ENST00000629293 TRPM2O94759 1503 aa7.11□□□□□ -1.27
LINC00550-201ENST00000629293 NCOA3Q9Y6Q9 1424 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 E9PCH4 1651 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 MST1RQ04912 1400 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 A0A0G2JS52 829 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 MAP3K13O43283 966 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 MYT1Q01538 1121 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 ROCK1Q13464 1354 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 ASXL1Q8IXJ9 1541 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 AK7Q96M32 723 aa7.1□□□□□ -1.27
LINC00550-201ENST00000629293 PNPLA6Q8IY17 1366 aa7.09□□□□□ -1.27
LINC00550-201ENST00000629293 CACNB1Q02641 598 aaPredicted RBP7.09□□□□□ -1.27
LINC00550-201ENST00000629293 SAFB2Q14151 953 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC00550-201ENST00000629293 CCDC9Q9Y3X0 531 aaKnown RBP7.09□□□□□ -1.27
LINC00550-201ENST00000629293 TRIM66O15016 1216 aa7.09□□□□□ -1.27
LINC00550-201ENST00000629293 ZMYND15Q9H091 742 aa7.09□□□□□ -1.27
LINC00550-201ENST00000629293 ADGRL3Q9HAR2 1447 aa7.08□□□□□ -1.28
LINC00550-201ENST00000629293 TMEM132EQ6IEE7 984 aa7.08□□□□□ -1.28
LINC00550-201ENST00000629293 WAPLQ7Z5K2 1190 aa7.08□□□□□ -1.28
LINC00550-201ENST00000629293 ROBO2Q9HCK4 1378 aa7.08□□□□□ -1.28
LINC00550-201ENST00000629293 RGS12O14924 1447 aa7.08□□□□□ -1.28
LINC00550-201ENST00000629293 TRPC5Q9UL62 973 aaPredicted RBP7.08□□□□□ -1.28
LINC00550-201ENST00000629293 AHDC1Q5TGY3 1603 aaPredicted RBP7.08□□□□□ -1.28
LINC00550-201ENST00000629293 DDX27Q96GQ7 796 aaKnown RBP7.08□□□□□ -1.28
LINC00550-201ENST00000629293 SETD5Q9C0A6 1442 aa7.07□□□□□ -1.28
LINC00550-201ENST00000629293 UNC13BO14795 1591 aa7.07□□□□□ -1.28
LINC00550-201ENST00000629293 DCCP43146 1447 aa7.07□□□□□ -1.28
LINC00550-201ENST00000629293 C1orf167Q5SNV9 1468 aa7.07□□□□□ -1.28
LINC00550-201ENST00000629293 PLEKHG3A1L390 1219 aa7.07□□□□□ -1.28
LINC00550-201ENST00000629293 ZRANB1Q9UGI0 708 aa7.07□□□□□ -1.28
LINC00550-201ENST00000629293 DIP2AQ14689 1571 aa7.07□□□□□ -1.28
LINC00550-201ENST00000629293 IL27Q8NEV9 243 aa7.07□□□□□ -1.28
LINC00550-201ENST00000629293 IQGAP3Q86VI3 1631 aa7.06□□□□□ -1.28
LINC00550-201ENST00000629293 PDE4AP27815 886 aa7.06□□□□□ -1.28
LINC00550-201ENST00000629293 CABLES1Q8TDN4 633 aa7.06□□□□□ -1.28
LINC00550-201ENST00000629293 NPHP3Q7Z494 1330 aa7.06□□□□□ -1.28
LINC00550-201ENST00000629293 PDE4DQ08499 809 aa7.05□□□□□ -1.28
LINC00550-201ENST00000629293 EMILIN3Q9NT22 766 aa7.05□□□□□ -1.28
LINC00550-201ENST00000629293 ATAD2Q6PL18 1390 aa7.05□□□□□ -1.28
LINC00550-201ENST00000629293 ONECUT3O60422 494 aaPredicted RBP7.05□□□□□ -1.28
LINC00550-201ENST00000629293 MKRN3Q13064 507 aaKnown RBP7.05□□□□□ -1.28
LINC00550-201ENST00000629293 ADGRF5Q8IZF2 1346 aa7.05□□□□□ -1.28
LINC00550-201ENST00000629293 SOS2Q07890 1332 aaPredicted RBP7.05□□□□□ -1.28
LINC00550-201ENST00000629293 SHPRHQ149N8 1683 aa7.04□□□□□ -1.28
LINC00550-201ENST00000629293 SMYD5Q6GMV2 418 aa7.04□□□□□ -1.28
LINC00550-201ENST00000629293 DEFB132Q7Z7B7 95 aa7.04□□□□□ -1.28
LINC00550-201ENST00000629293 GPIHBP1Q8IV16 184 aa7.04□□□□□ -1.28
LINC00550-201ENST00000629293 PODXL2Q9NZ53 605 aa7.04□□□□□ -1.28
LINC00550-201ENST00000629293 SF3B2Q13435 895 aaKnown RBP7.03□□□□□ -1.28
LINC00550-201ENST00000629293 GJD4Q96KN9 370 aaPredicted RBP7.03□□□□□ -1.28
LINC00550-201ENST00000629293 FAM117AQ9C073 453 aa7.03□□□□□ -1.28
LINC00550-201ENST00000629293 NAIPQ13075 1403 aa7.03□□□□□ -1.28
LINC00550-201ENST00000629293 SETBP1Q9Y6X0 1596 aa7.03□□□□□ -1.28
LINC00550-201ENST00000629293 CLTCL1P53675 1640 aa7.03□□□□□ -1.28
LINC00550-201ENST00000629293 NRXN3Q9Y4C0 1643 aa7.03□□□□□ -1.28
LINC00550-201ENST00000629293 POTEHQ6S545 545 aa7.03□□□□□ -1.28
LINC00550-201ENST00000629293 FNBP4Q8N3X1 1017 aaPredicted RBP7.03□□□□□ -1.28
LINC00550-201ENST00000629293 FXR2P51116 673 aaKnown RBP eCLIP7.02□□□□□ -1.28
LINC00550-201ENST00000629293 SPHKAPQ2M3C7 1700 aa7.02□□□□□ -1.28
LINC00550-201ENST00000629293 PMFBP1Q8TBY8 1022 aa7.02□□□□□ -1.28
LINC00550-201ENST00000629293 XRN1Q8IZH2 1706 aaKnown RBP7.02□□□□□ -1.29
LINC00550-201ENST00000629293 NEXMIFQ5QGS0 1516 aa7.02□□□□□ -1.29
LINC00550-201ENST00000629293 KRT28Q7Z3Y7 464 aa7.02□□□□□ -1.29
LINC00550-201ENST00000629293 HIRIP3Q9BW71 556 aaPredicted RBP7.02□□□□□ -1.29
LINC00550-201ENST00000629293 CDK12Q9NYV4 1490 aaPredicted RBP7.02□□□□□ -1.29
LINC00550-201ENST00000629293 PLEKHH1Q9ULM0 1364 aa7.02□□□□□ -1.29
LINC00550-201ENST00000629293 POGKQ9P215 609 aa7.02□□□□□ -1.29
LINC00550-201ENST00000629293 PSME1Q06323 249 aa7.01□□□□□ -1.29
LINC00550-201ENST00000629293 FAM182BQ5T319 152 aa7.01□□□□□ -1.29
LINC00550-201ENST00000629293 CCDC144AA2RUR9 1427 aa7.01□□□□□ -1.29
LINC00550-201ENST00000629293 NALCNQ8IZF0 1738 aa7.01□□□□□ -1.29
LINC00550-201ENST00000629293 RPGRIP1LQ68CZ1 1315 aa7.01□□□□□ -1.29
LINC00550-201ENST00000629293 PSDA5PKW4 1024 aaPredicted RBP7.01□□□□□ -1.29
LINC00550-201ENST00000629293 UNC5CLQ8IV45 518 aa7.01□□□□□ -1.29
LINC00550-201ENST00000629293 PDIA6Q15084 440 aa7.01□□□□□ -1.29
LINC00550-201ENST00000629293 SEPT12Q8IYM1 358 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms