RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 FGD5Q6ZNL6 1462 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 ZNF777Q9ULD5 760 aaPredicted RBP4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 ERBB3P21860 1342 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 ZBED9Q6R2W3 1325 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 LIG1P18858 919 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 KCNA1Q09470 495 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 SPOCK3Q9BQ16 436 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 YY1AP1Q9H869 796 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 STK26Q9P289 416 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 CTDP1Q9Y5B0 961 aaPredicted RBP4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 REREQ9P2R6 1566 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 VPS8Q8N3P4 1428 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 ZNF853P0CG23 659 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 CHADLQ6NUI6 762 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 RETREG2Q8NC44 543 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 NUCKS1Q9H1E3 243 aaKnown RBP4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 GRIN2AQ12879 1464 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 FHAD1B1AJZ9 1412 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 IRF6O14896 467 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 MAP4K4O95819 1239 aaPredicted RBP4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 SCP2P22307 547 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 SETDB1Q15047 1291 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 LRCH2Q5VUJ6 765 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 CHMP3Q9Y3E7 222 aa4.76□□□□□ -1.65
R3HDM1-220ENST00000628915 RGL2O15211 777 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 ZKSCAN8Q15776 578 aaPredicted RBP4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 MNS1Q8NEH6 495 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 CCDC34Q96HJ3 373 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 CCDC94Q9BW85 323 aaPredicted RBP4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 FAM135AQ9P2D6 1515 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 CFAP74Q9C0B2 1584 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 CREB3O43889 395 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 PDE4AP27815 886 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 PAF1Q8N7H5 531 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 RNF217Q8TC41 542 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 VTI1AQ96AJ9 217 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 TSPAN18Q96SJ8 248 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 ARAP1Q96P48 1450 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 RAB11FIP3O75154 756 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 TERF1P54274 439 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 CREBZFQ9NS37 354 aa4.75□□□□□ -1.65
R3HDM1-220ENST00000628915 DIP2BQ9P265 1576 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 DMTNQ08495 405 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 HDGFL1Q5TGJ6 251 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 EP400NLQ6ZTU2 488 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 SP7Q8TDD2 431 aaPredicted RBP4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 SPATA32Q96LK8 384 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 C19orf67A6NJJ6 358 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 BIRC2Q13490 618 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 NBPF10Q6P3W6 841 aaKnown RBP4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 ZBTB9Q96C00 473 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 NBPF3Q9H094 633 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 IPO7O95373 1038 aaKnown RBP4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 CCDC175P0C221 793 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 MKRN3Q13064 507 aaKnown RBP4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 CSPP1Q1MSJ5 1256 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 BACH2Q9BYV9 841 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 UPF2Q9HAU5 1272 aaKnown RBP4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 RRAGDQ9NQL2 400 aaPredicted RBP4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 NUB1Q9Y5A7 615 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 ADCY10Q96PN6 1610 aa4.74□□□□□ -1.65
R3HDM1-220ENST00000628915 CCDC172P0C7W6 258 aa4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 FEZ2Q9UHY8 353 aaPredicted RBP4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 CLIP1P30622 1438 aa4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 CASQ1P31415 396 aa4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 FAM160A1Q05DH4 1040 aa4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 SMC4Q9NTJ3 1288 aa4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 MAGEC2Q9UBF1 373 aaPredicted RBP4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 KIF21BO75037 1637 aa4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 GABBR1Q9UBS5 961 aa4.73□□□□□ -1.65
R3HDM1-220ENST00000628915 RHBDL3P58872 404 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 SF3A1Q15459 793 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 DCAF11Q8TEB1 546 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 CLUAP1Q96AJ1 413 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 TPX2Q9ULW0 747 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 SMC3Q9UQE7 1217 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 KIF3AQ9Y496 699 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 CTR9Q6PD62 1173 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 TIGD1Q96MW7 591 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 TRAIPQ9BWF2 469 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 GOPCQ9HD26 462 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 SMG6Q86US8 1419 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 BSDC1Q9NW68 430 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 KLHL42Q9P2K6 505 aa4.72□□□□□ -1.65
R3HDM1-220ENST00000628915 CD44P16070 742 aaKnown RBP4.71□□□□□ -1.65
R3HDM1-220ENST00000628915 SH3BGRP55822 239 aaPredicted RBP4.71□□□□□ -1.65
R3HDM1-220ENST00000628915 ABCA8O94911 1581 aa4.71□□□□□ -1.65
R3HDM1-220ENST00000628915 RNF123Q5XPI4 1314 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 GAPVD1Q14C86 1478 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 SNAPC4Q5SXM2 1469 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 HMMRO75330 724 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 NEXNQ0ZGT2 675 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 FAM210AQ96ND0 272 aa4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 CCDC85AQ96PX6 553 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 ZNF608Q9ULD9 1512 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 TESPA1A2RU30 521 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 CHAF1AQ13111 956 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-220ENST00000628915 MTA1Q13330 715 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms