RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 MAPK8IP3Q9UPT6 1336 aa34.67■■■■□ 3.14
NRXN1-228ENST00000628364 TMPOP42166 694 aaKnown RBP34.65■■■■□ 3.14
NRXN1-228ENST00000628364 PNPLA6Q8IY17 1366 aa34.65■■■■□ 3.14
NRXN1-228ENST00000628364 CABP1Q9NZU7 370 aa34.64■■■■□ 3.14
NRXN1-228ENST00000628364 RIMS2Q9UQ26 1411 aa34.64■■■■□ 3.14
NRXN1-228ENST00000628364 IL16Q14005 1332 aa34.64■■■■□ 3.14
NRXN1-228ENST00000628364 PPM1GO15355 546 aaPredicted RBP34.63■■■■□ 3.13
NRXN1-228ENST00000628364 DIAPH1O60610 1272 aaKnown RBP34.62■■■■□ 3.13
NRXN1-228ENST00000628364 DEKP35659 375 aaKnown RBP34.62■■■■□ 3.13
NRXN1-228ENST00000628364 TSPOAP1O95153 1857 aa34.62■■■■□ 3.13
NRXN1-228ENST00000628364 ATP7BP35670 1465 aa34.61■■■■□ 3.13
NRXN1-228ENST00000628364 KIF20BQ96Q89 1820 aa34.61■■■■□ 3.13
NRXN1-228ENST00000628364 USP35Q9P2H5 1018 aa34.6■■■■□ 3.13
NRXN1-228ENST00000628364 TRIM35Q9UPQ4 493 aa34.59■■■■□ 3.13
NRXN1-228ENST00000628364 RLBP1P12271 317 aa34.57■■■■□ 3.13
NRXN1-228ENST00000628364 ZKSCAN2Q63HK3 967 aa34.57■■■■□ 3.13
NRXN1-228ENST00000628364 BCL2L13Q9BXK5 485 aa34.56■■■■□ 3.12
NRXN1-228ENST00000628364 SETD1AO15047 1707 aaKnown RBP34.56■■■■□ 3.12
NRXN1-228ENST00000628364 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.56■■■■□ 3.12
NRXN1-228ENST00000628364 DAXXQ9UER7 740 aaPredicted RBP34.54■■■■□ 3.12
NRXN1-228ENST00000628364 CDC42BPGQ6DT37 1551 aa34.54■■■■□ 3.12
NRXN1-228ENST00000628364 ZMYM3Q14202 1370 aa34.54■■■■□ 3.12
NRXN1-228ENST00000628364 RWDD1Q9H446 243 aaPredicted RBP34.53■■■■□ 3.12
NRXN1-228ENST00000628364 FCHSD2O94868 740 aa34.53■■■■□ 3.12
NRXN1-228ENST00000628364 MVPQ14764 893 aaKnown RBP34.53■■■■□ 3.12
NRXN1-228ENST00000628364 WAPLQ7Z5K2 1190 aa34.52■■■■□ 3.12
NRXN1-228ENST00000628364 PCDHB15Q9Y5E8 787 aa34.52■■■■□ 3.12
NRXN1-228ENST00000628364 RIPK4P57078 832 aa34.51■■■■□ 3.12
NRXN1-228ENST00000628364 EXOSC9Q06265 439 aaKnown RBP34.51■■■■□ 3.11
NRXN1-228ENST00000628364 DZIP1LQ8IYY4 767 aaKnown RBP34.51■■■■□ 3.11
NRXN1-228ENST00000628364 TSR2Q969E8 191 aaKnown RBP34.51■■■■□ 3.11
NRXN1-228ENST00000628364 TNNQ9UQP3 1299 aa34.5■■■■□ 3.11
NRXN1-228ENST00000628364 VIRMAQ69YN4 1812 aaKnown RBP34.5■■■■□ 3.11
NRXN1-228ENST00000628364 LAS1LQ9Y4W2 734 aaKnown RBP34.5■■■■□ 3.11
NRXN1-228ENST00000628364 FTSJ3Q8IY81 847 aaKnown RBP34.49■■■■□ 3.11
NRXN1-228ENST00000628364 SMC4Q9NTJ3 1288 aa34.47■■■■□ 3.11
NRXN1-228ENST00000628364 HDGFP51858 240 aaKnown RBP34.46■■■■□ 3.11
NRXN1-228ENST00000628364 NEFMP07197 916 aa34.45■■■■□ 3.11
NRXN1-228ENST00000628364 MLECQ14165 292 aa34.45■■■■□ 3.11
NRXN1-228ENST00000628364 SIRT1Q96EB6 747 aa34.45■■■■□ 3.11
NRXN1-228ENST00000628364 POLKQ9UBT6 870 aa34.45■■■■□ 3.11
NRXN1-228ENST00000628364 WASLO00401 505 aaPredicted RBP34.44■■■■□ 3.1
NRXN1-228ENST00000628364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.44■■■■□ 3.1
NRXN1-228ENST00000628364 EDC4Q6P2E9 1401 aaKnown RBP34.44■■■■□ 3.1
NRXN1-228ENST00000628364 ESF1Q9H501 851 aaKnown RBP34.44■■■■□ 3.1
NRXN1-228ENST00000628364 CPSF1Q10570 1443 aaKnown RBP34.44■■■■□ 3.1
NRXN1-228ENST00000628364 NRXN3Q9Y4C0 1643 aa34.43■■■■□ 3.1
NRXN1-228ENST00000628364 SSH1Q8WYL5 1049 aa34.41■■■■□ 3.1
NRXN1-228ENST00000628364 FAM135BQ49AJ0 1406 aa34.4■■■■□ 3.1
NRXN1-228ENST00000628364 RSPH6AQ9H0K4 717 aa34.4■■■■□ 3.1
NRXN1-228ENST00000628364 ATF7IPQ6VMQ6 1270 aa34.39■■■■□ 3.1
NRXN1-228ENST00000628364 DDX19BQ9UMR2 479 aa34.39■■■■□ 3.1
NRXN1-228ENST00000628364 LRRC7Q96NW7 1537 aa34.39■■■■□ 3.1
NRXN1-228ENST00000628364 PPIP5K1Q6PFW1 1433 aa34.39■■■■□ 3.1
NRXN1-228ENST00000628364 PDZRN3Q9UPQ7 1066 aa34.38■■■■□ 3.09
NRXN1-228ENST00000628364 METP08581 1390 aa34.37■■■■□ 3.09
NRXN1-228ENST00000628364 TRIM27P14373 513 aa34.37■■■■□ 3.09
NRXN1-228ENST00000628364 BCL11AQ9H165 835 aa34.37■■■■□ 3.09
NRXN1-228ENST00000628364 KNDC1Q76NI1 1749 aa34.37■■■■□ 3.09
NRXN1-228ENST00000628364 TECPR2O15040 1411 aa34.36■■■■□ 3.09
NRXN1-228ENST00000628364 IPO8O15397 1037 aaKnown RBP34.36■■■■□ 3.09
NRXN1-228ENST00000628364 KIF16BQ96L93 1317 aa34.36■■■■□ 3.09
NRXN1-228ENST00000628364 ALDH1L2Q3SY69 923 aa34.36■■■■□ 3.09
NRXN1-228ENST00000628364 ZNF428Q96B54 188 aa34.36■■■■□ 3.09
NRXN1-228ENST00000628364 PRKAR2BP31323 418 aa34.35■■■■□ 3.09
NRXN1-228ENST00000628364 AATKQ6ZMQ8 1374 aa34.35■■■■□ 3.09
NRXN1-228ENST00000628364 CALD1Q05682 793 aaKnown RBP34.34■■■■□ 3.09
NRXN1-228ENST00000628364 USP19O94966 1318 aa34.32■■■■□ 3.09
NRXN1-228ENST00000628364 NOB1Q9ULX3 412 aaKnown RBP34.32■■■■□ 3.09
NRXN1-228ENST00000628364 HDAC1Q13547 482 aaPredicted RBP34.32■■■■□ 3.08
NRXN1-228ENST00000628364 CDK12Q9NYV4 1490 aaPredicted RBP34.31■■■■□ 3.08
NRXN1-228ENST00000628364 SLC4A3P48751 1232 aa34.31■■■■□ 3.08
NRXN1-228ENST00000628364 NFE2L2Q16236 605 aa34.31■■■■□ 3.08
NRXN1-228ENST00000628364 NUDT16Q96DE0 195 aaKnown RBP34.31■■■■□ 3.08
NRXN1-228ENST00000628364 CCDC61Q9Y6R9 512 aa34.31■■■■□ 3.08
NRXN1-228ENST00000628364 MAP2P11137 1827 aaKnown RBP34.31■■■■□ 3.08
NRXN1-228ENST00000628364 TXNDC2Q86VQ3 553 aa34.31■■■■□ 3.08
NRXN1-228ENST00000628364 ITPRIPQ8IWB1 547 aa34.29■■■■□ 3.08
NRXN1-228ENST00000628364 CPS1P31327 1500 aa34.28■■■■□ 3.08
NRXN1-228ENST00000628364 BRPF1P55201 1214 aaPredicted RBP34.28■■■■□ 3.08
NRXN1-228ENST00000628364 TNRQ92752 1358 aa34.28■■■■□ 3.08
NRXN1-228ENST00000628364 IL13P35225 146 aa34.28■■■■□ 3.08
NRXN1-228ENST00000628364 ZNF692Q9BU19 519 aaPredicted RBP34.27■■■■□ 3.08
NRXN1-228ENST00000628364 UPF2Q9HAU5 1272 aaKnown RBP34.26■■■■□ 3.08
NRXN1-228ENST00000628364 NME9Q86XW9 330 aa34.26■■■■□ 3.07
NRXN1-228ENST00000628364 COG3Q96JB2 828 aa34.26■■■■□ 3.07
NRXN1-228ENST00000628364 FBLN1P23142 703 aa34.25■■■■□ 3.07
NRXN1-228ENST00000628364 MON2Q7Z3U7 1717 aa34.25■■■■□ 3.07
NRXN1-228ENST00000628364 EMILIN1Q9Y6C2 1016 aa34.24■■■■□ 3.07
NRXN1-228ENST00000628364 SEC24BO95487 1268 aa34.24■■■■□ 3.07
NRXN1-228ENST00000628364 KIF13AQ9H1H9 1805 aa34.22■■■■□ 3.07
NRXN1-228ENST00000628364 TMEM2Q9UHN6 1383 aa34.22■■■■□ 3.07
NRXN1-228ENST00000628364 TMEM57Q8N5G2 664 aa34.22■■■■□ 3.07
NRXN1-228ENST00000628364 HMOX1P09601 288 aa34.21■■■■□ 3.07
NRXN1-228ENST00000628364 PHACTR3Q96KR7 559 aa34.21■■■■□ 3.07
NRXN1-228ENST00000628364 GNAI1P63096 354 aa34.21■■■■□ 3.07
NRXN1-228ENST00000628364 BECN1Q14457 450 aa34.21■■■■□ 3.07
NRXN1-228ENST00000628364 ZBTB40Q9NUA8 1239 aa34.21■■■■□ 3.07
NRXN1-228ENST00000628364 LMOD3Q0VAK6 560 aa34.2■■■■□ 3.07
NRXN1-228ENST00000628364 NFKBIBQ15653 356 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms