RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
ATRX-214ENST00000624166 BECN2A8MW95 431 aa14.31□□□□□ -0.12
ATRX-214ENST00000624166 SSFA2P28290 1259 aa14.3□□□□□ -0.12
ATRX-214ENST00000624166 TWISTNBQ3B726 338 aaPredicted RBP14.3□□□□□ -0.12
ATRX-214ENST00000624166 SEC24BO95487 1268 aa14.3□□□□□ -0.12
ATRX-214ENST00000624166 ZKSCAN1P17029 563 aaPredicted RBP14.3□□□□□ -0.12
ATRX-214ENST00000624166 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
ATRX-214ENST00000624166 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
ATRX-214ENST00000624166 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
ATRX-214ENST00000624166 TRIM27P14373 513 aa14.29□□□□□ -0.12
ATRX-214ENST00000624166 TMEM132EQ6IEE7 984 aa14.29□□□□□ -0.12
ATRX-214ENST00000624166 DNMT1P26358 1616 aaKnown RBP14.29□□□□□ -0.12
ATRX-214ENST00000624166 BAG4O95429 457 aaKnown RBP14.29□□□□□ -0.12
ATRX-214ENST00000624166 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.29□□□□□ -0.12
ATRX-214ENST00000624166 COL17A1Q9UMD9 1497 aaPredicted RBP14.29□□□□□ -0.12
ATRX-214ENST00000624166 IFT57Q9NWB7 429 aa14.28□□□□□ -0.12
ATRX-214ENST00000624166 HMOX1P09601 288 aa14.28□□□□□ -0.12
ATRX-214ENST00000624166 PLB1Q6P1J6 1458 aa14.28□□□□□ -0.12
ATRX-214ENST00000624166 HS1BP3Q53T59 392 aa14.28□□□□□ -0.12
ATRX-214ENST00000624166 SMC5Q8IY18 1101 aa14.28□□□□□ -0.12
ATRX-214ENST00000624166 DYNC1I1O14576 645 aa14.27□□□□□ -0.12
ATRX-214ENST00000624166 ITSN2Q9NZM3 1697 aa14.27□□□□□ -0.12
ATRX-214ENST00000624166 CCDC27Q2M243 656 aa14.27□□□□□ -0.12
ATRX-214ENST00000624166 CHMP4CQ96CF2 233 aa14.27□□□□□ -0.12
ATRX-214ENST00000624166 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.12
ATRX-214ENST00000624166 RPAP2Q8IXW5 612 aaPredicted RBP14.27□□□□□ -0.13
ATRX-214ENST00000624166 ZNF592Q92610 1267 aa14.27□□□□□ -0.13
ATRX-214ENST00000624166 SYCE3A1L190 88 aa14.27□□□□□ -0.13
ATRX-214ENST00000624166 HSP90B1P14625 803 aaKnown RBP14.27□□□□□ -0.13
ATRX-214ENST00000624166 VPS37CA5D8V6 355 aaPredicted RBP14.26□□□□□ -0.13
ATRX-214ENST00000624166 FCHSD2O94868 740 aa14.26□□□□□ -0.13
ATRX-214ENST00000624166 AFAP1Q8N556 730 aa14.26□□□□□ -0.13
ATRX-214ENST00000624166 H3BQV1 296 aa14.26□□□□□ -0.13
ATRX-214ENST00000624166 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
ATRX-214ENST00000624166 XPCQ01831 940 aaPredicted RBP14.26□□□□□ -0.13
ATRX-214ENST00000624166 POLR3AO14802 1390 aaPredicted RBP14.25□□□□□ -0.13
ATRX-214ENST00000624166 RAB3GAP1Q15042 981 aa14.25□□□□□ -0.13
ATRX-214ENST00000624166 ZMYM3Q14202 1370 aa14.25□□□□□ -0.13
ATRX-214ENST00000624166 GNAI3P08754 354 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 NUCB1Q02818 461 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 EIF2AK4Q9P2K8 1649 aaKnown RBP14.24□□□□□ -0.13
ATRX-214ENST00000624166 NPC1L1Q9UHC9 1359 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 OFD1O75665 1012 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 HSP90AB4PQ58FF6 505 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 BICD2Q8TD16 824 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 IL16Q14005 1332 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 NUP153P49790 1475 aaKnown RBP14.24□□□□□ -0.13
ATRX-214ENST00000624166 CCDC66A2RUB6 948 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 WDR62O43379 1518 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 TBC1D9Q6ZT07 1266 aa14.24□□□□□ -0.13
ATRX-214ENST00000624166 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
ATRX-214ENST00000624166 TEX35Q5T0J7 233 aa14.23□□□□□ -0.13
ATRX-214ENST00000624166 RNF20Q5VTR2 975 aa14.23□□□□□ -0.13
ATRX-214ENST00000624166 ADGRL2O95490 1459 aa14.23□□□□□ -0.13
ATRX-214ENST00000624166 FKBP5Q13451 457 aaPredicted RBP14.23□□□□□ -0.13
ATRX-214ENST00000624166 GNL2Q13823 731 aaKnown RBP14.23□□□□□ -0.13
ATRX-214ENST00000624166 CCDC192P0DO97 292 aa14.22□□□□□ -0.13
ATRX-214ENST00000624166 RPGRIP1LQ68CZ1 1315 aa14.22□□□□□ -0.13
ATRX-214ENST00000624166 RAPGEF6Q8TEU7 1601 aa14.22□□□□□ -0.13
ATRX-214ENST00000624166 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
ATRX-214ENST00000624166 SF3A1Q15459 793 aaKnown RBP14.22□□□□□ -0.13
ATRX-214ENST00000624166 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
ATRX-214ENST00000624166 SAMD9Q5K651 1589 aa14.22□□□□□ -0.13
ATRX-214ENST00000624166 NSD2O96028 1365 aa14.22□□□□□ -0.13
ATRX-214ENST00000624166 PDCP20941 246 aa14.22□□□□□ -0.13
ATRX-214ENST00000624166 ZSCAN23Q3MJ62 389 aa14.21□□□□□ -0.13
ATRX-214ENST00000624166 TRIM5Q9C035 493 aa14.21□□□□□ -0.13
ATRX-214ENST00000624166 FIBPO43427 364 aa14.21□□□□□ -0.14
ATRX-214ENST00000624166 AMPHP49418 695 aa14.21□□□□□ -0.14
ATRX-214ENST00000624166 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 RLBP1P12271 317 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
ATRX-214ENST00000624166 GNAI2P04899 355 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 PDCL2Q8N4E4 241 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 ARGLU1Q9NWB6 273 aaPredicted RBP14.2□□□□□ -0.14
ATRX-214ENST00000624166 ATAD2Q6PL18 1390 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 TERF1P54274 439 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 TPD52L1Q16890 204 aaPredicted RBP14.2□□□□□ -0.14
ATRX-214ENST00000624166 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 PRIMPOLQ96LW4 560 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 SRCIN1Q9C0H9 1055 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 TSPYL4Q9UJ04 414 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 ZKSCAN5Q9Y2L8 839 aa14.2□□□□□ -0.14
ATRX-214ENST00000624166 CNTROBQ8N137 903 aa14.19□□□□□ -0.14
ATRX-214ENST00000624166 CCDC34Q96HJ3 373 aa14.19□□□□□ -0.14
ATRX-214ENST00000624166 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
ATRX-214ENST00000624166 CCT4P50991 539 aaKnown RBP14.19□□□□□ -0.14
ATRX-214ENST00000624166 LRSAM1Q6UWE0 723 aa14.19□□□□□ -0.14
ATRX-214ENST00000624166 PDIA4P13667 645 aaKnown RBP14.19□□□□□ -0.14
ATRX-214ENST00000624166 GPS2Q13227 327 aa14.19□□□□□ -0.14
ATRX-214ENST00000624166 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
ATRX-214ENST00000624166 TAF3Q5VWG9 929 aa14.18□□□□□ -0.14
ATRX-214ENST00000624166 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
ATRX-214ENST00000624166 GOLGA6L1Q8N7Z2 621 aa14.18□□□□□ -0.14
ATRX-214ENST00000624166 KDM5CP41229 1560 aa14.18□□□□□ -0.14
ATRX-214ENST00000624166 IFIT2P09913 472 aaKnown RBP14.18□□□□□ -0.14
ATRX-214ENST00000624166 UVSSAQ2YD98 709 aa14.18□□□□□ -0.14
ATRX-214ENST00000624166 LRRCC1Q9C099 1032 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms