RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ATP7BP35670 1465 aa10.74□□□□□ -0.69
SND1-IT1-201ENST00000623342 FRAT1Q92837 279 aaPredicted RBP10.74□□□□□ -0.69
SND1-IT1-201ENST00000623342 CLUAP1Q96AJ1 413 aa10.74□□□□□ -0.69
SND1-IT1-201ENST00000623342 ZMYM3Q14202 1370 aa10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 PNPLA6Q8IY17 1366 aa10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 MAPK8IP3Q9UPT6 1336 aa10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 AAMPQ13685 434 aa10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 COG6Q9Y2V7 657 aa10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 NRXN3Q9Y4C0 1643 aa10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 DIAPH1O60610 1272 aaKnown RBP10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 TMPOP42166 694 aaKnown RBP10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 PNNQ9H307 717 aaKnown RBP10.73□□□□□ -0.69
SND1-IT1-201ENST00000623342 CT47B1P0C2W7 299 aaPredicted RBP10.72□□□□□ -0.69
SND1-IT1-201ENST00000623342 FAM161AQ3B820 660 aa10.72□□□□□ -0.69
SND1-IT1-201ENST00000623342 IGHDP01880 384 aa10.71□□□□□ -0.69
SND1-IT1-201ENST00000623342 HDGFP51858 240 aaKnown RBP10.71□□□□□ -0.69
SND1-IT1-201ENST00000623342 METP08581 1390 aa10.7□□□□□ -0.7
SND1-IT1-201ENST00000623342 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
SND1-IT1-201ENST00000623342 RGS3P49796 1198 aa10.7□□□□□ -0.7
SND1-IT1-201ENST00000623342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.7□□□□□ -0.7
SND1-IT1-201ENST00000623342 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
SND1-IT1-201ENST00000623342 IL16Q14005 1332 aa10.7□□□□□ -0.7
SND1-IT1-201ENST00000623342 CDC42BPGQ6DT37 1551 aa10.7□□□□□ -0.7
SND1-IT1-201ENST00000623342 DDRGK1Q96HY6 314 aa10.7□□□□□ -0.7
SND1-IT1-201ENST00000623342 C8orf34Q49A92 452 aa10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 SIRT1Q96EB6 747 aa10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 BCL2L13Q9BXK5 485 aa10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 CPSF1Q10570 1443 aaKnown RBP10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 KNDC1Q76NI1 1749 aa10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 PMFBP1Q8TBY8 1022 aa10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 FAM135BQ49AJ0 1406 aa10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 EDC4Q6P2E9 1401 aaKnown RBP10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 PPIP5K1Q6PFW1 1433 aa10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 TNRQ92752 1358 aa10.69□□□□□ -0.7
SND1-IT1-201ENST00000623342 TECPR2O15040 1411 aa10.68□□□□□ -0.7
SND1-IT1-201ENST00000623342 FCHSD2O94868 740 aa10.68□□□□□ -0.7
SND1-IT1-201ENST00000623342 RLBP1P12271 317 aa10.68□□□□□ -0.7
SND1-IT1-201ENST00000623342 RIPK4P57078 832 aa10.68□□□□□ -0.7
SND1-IT1-201ENST00000623342 TSR2Q969E8 191 aaKnown RBP10.68□□□□□ -0.7
SND1-IT1-201ENST00000623342 POLKQ9UBT6 870 aa10.68□□□□□ -0.7
SND1-IT1-201ENST00000623342 TXNDC2Q86VQ3 553 aa10.68□□□□□ -0.7
SND1-IT1-201ENST00000623342 EXOSC9Q06265 439 aaKnown RBP10.67□□□□□ -0.7
SND1-IT1-201ENST00000623342 ZKSCAN2Q63HK3 967 aa10.67□□□□□ -0.7
SND1-IT1-201ENST00000623342 TNNQ9UQP3 1299 aa10.67□□□□□ -0.7
SND1-IT1-201ENST00000623342 NBR1Q14596 966 aa10.67□□□□□ -0.7
SND1-IT1-201ENST00000623342 CPS1P31327 1500 aa10.67□□□□□ -0.7
SND1-IT1-201ENST00000623342 LRRC7Q96NW7 1537 aa10.67□□□□□ -0.7
SND1-IT1-201ENST00000623342 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 NUDT16Q96DE0 195 aaKnown RBP10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 TMEM2Q9UHN6 1383 aa10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 NEFMP07197 916 aa10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 MVPQ14764 893 aaKnown RBP10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 RSPH6AQ9H0K4 717 aa10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 SMC4Q9NTJ3 1288 aa10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 PCDHB15Q9Y5E8 787 aa10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 UBR1Q8IWV7 1749 aa10.66□□□□□ -0.7
SND1-IT1-201ENST00000623342 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
SND1-IT1-201ENST00000623342 DZIP1LQ8IYY4 767 aaKnown RBP10.65□□□□□ -0.7
SND1-IT1-201ENST00000623342 CCDC61Q9Y6R9 512 aa10.65□□□□□ -0.7
SND1-IT1-201ENST00000623342 MAP2P11137 1827 aaKnown RBP10.65□□□□□ -0.7
SND1-IT1-201ENST00000623342 FBLN1P23142 703 aa10.65□□□□□ -0.7
SND1-IT1-201ENST00000623342 PRKAR2BP31323 418 aa10.65□□□□□ -0.7
SND1-IT1-201ENST00000623342 AATKQ6ZMQ8 1374 aa10.65□□□□□ -0.7
SND1-IT1-201ENST00000623342 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.71
SND1-IT1-201ENST00000623342 NME9Q86XW9 330 aa10.64□□□□□ -0.71
SND1-IT1-201ENST00000623342 SSH1Q8WYL5 1049 aa10.64□□□□□ -0.71
SND1-IT1-201ENST00000623342 RWDD1Q9H446 243 aaPredicted RBP10.64□□□□□ -0.71
SND1-IT1-201ENST00000623342 CDK12Q9NYV4 1490 aaPredicted RBP10.64□□□□□ -0.71
SND1-IT1-201ENST00000623342 COG3Q96JB2 828 aa10.63□□□□□ -0.71
SND1-IT1-201ENST00000623342 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
SND1-IT1-201ENST00000623342 EMILIN1Q9Y6C2 1016 aa10.63□□□□□ -0.71
SND1-IT1-201ENST00000623342 VIRMAQ69YN4 1812 aaKnown RBP10.63□□□□□ -0.71
SND1-IT1-201ENST00000623342 AKAP12Q02952 1782 aa10.63□□□□□ -0.71
SND1-IT1-201ENST00000623342 IL13P35225 146 aa10.63□□□□□ -0.71
SND1-IT1-201ENST00000623342 ADAMTS13Q76LX8 1427 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 ITSN1Q15811 1721 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 TRIM27P14373 513 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 NFE2L2Q16236 605 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 RTL5Q5HYW3 569 aaPredicted RBP10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 ATF7IPQ6VMQ6 1270 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 ROBO2Q9HCK4 1378 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 C3P01024 1663 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 NCKAP5LQ9HCH0 1330 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 DDX19BQ9UMR2 479 aa10.62□□□□□ -0.71
SND1-IT1-201ENST00000623342 KIF16BQ96L93 1317 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 HMOX1P09601 288 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 LTKP29376 864 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 CALD1Q05682 793 aaKnown RBP10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 ALDH1L2Q3SY69 923 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 NOB1Q9ULX3 412 aaKnown RBP10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 PLEKHG1Q9ULL1 1385 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 PRR36Q9H6K5 1346 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 ZNF428Q96B54 188 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 PHACTR3Q96KR7 559 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 PDZRN3Q9UPQ7 1066 aa10.61□□□□□ -0.71
SND1-IT1-201ENST00000623342 DAXXQ9UER7 740 aaPredicted RBP10.6□□□□□ -0.71
SND1-IT1-201ENST00000623342 ITPRIPQ8IWB1 547 aa10.6□□□□□ -0.71
SND1-IT1-201ENST00000623342 LAS1LQ9Y4W2 734 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms