RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
TMCO3-210ENST00000620021 DLC1Q96QB1 1528 aa17.1■□□□□ 0.33
TMCO3-210ENST00000620021 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
TMCO3-210ENST00000620021 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
TMCO3-210ENST00000620021 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
TMCO3-210ENST00000620021 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
TMCO3-210ENST00000620021 SKAP1Q86WV1 359 aa17.09■□□□□ 0.33
TMCO3-210ENST00000620021 HMOX1P09601 288 aa17.09■□□□□ 0.33
TMCO3-210ENST00000620021 USP32Q8NFA0 1604 aa17.08■□□□□ 0.33
TMCO3-210ENST00000620021 E9PSI1 815 aa17.08■□□□□ 0.32
TMCO3-210ENST00000620021 DIAPH1O60610 1272 aaKnown RBP17.08■□□□□ 0.32
TMCO3-210ENST00000620021 TRMT2AQ8IZ69 625 aaKnown RBP17.08■□□□□ 0.32
TMCO3-210ENST00000620021 BCL2L13Q9BXK5 485 aa17.07■□□□□ 0.32
TMCO3-210ENST00000620021 KCNA6P17658 529 aa17.07■□□□□ 0.32
TMCO3-210ENST00000620021 ACEP12821 1306 aa17.06■□□□□ 0.32
TMCO3-210ENST00000620021 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
TMCO3-210ENST00000620021 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
TMCO3-210ENST00000620021 COG3Q96JB2 828 aa17.04■□□□□ 0.32
TMCO3-210ENST00000620021 TECPR2O15040 1411 aa17.04■□□□□ 0.32
TMCO3-210ENST00000620021 CPS1P31327 1500 aa17.04■□□□□ 0.32
TMCO3-210ENST00000620021 CPSF1Q10570 1443 aaKnown RBP17.04■□□□□ 0.32
TMCO3-210ENST00000620021 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
TMCO3-210ENST00000620021 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
TMCO3-210ENST00000620021 FRAT1Q92837 279 aaPredicted RBP17.03■□□□□ 0.32
TMCO3-210ENST00000620021 PLEKHF1Q96S99 279 aa17.03■□□□□ 0.32
TMCO3-210ENST00000620021 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.03■□□□□ 0.32
TMCO3-210ENST00000620021 MAPK8IP3Q9UPT6 1336 aa17.03■□□□□ 0.32
TMCO3-210ENST00000620021 ATP7BP35670 1465 aa17.02■□□□□ 0.32
TMCO3-210ENST00000620021 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.31
TMCO3-210ENST00000620021 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
TMCO3-210ENST00000620021 PRKAR2BP31323 418 aa17.01■□□□□ 0.31
TMCO3-210ENST00000620021 NUTM2GQ5VZR2 741 aa17.01■□□□□ 0.31
TMCO3-210ENST00000620021 RIPK4P57078 832 aa17.01■□□□□ 0.31
TMCO3-210ENST00000620021 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
TMCO3-210ENST00000620021 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
TMCO3-210ENST00000620021 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
TMCO3-210ENST00000620021 TNNQ9UQP3 1299 aa17■□□□□ 0.31
TMCO3-210ENST00000620021 NGDNQ8NEJ9 315 aaKnown RBP17■□□□□ 0.31
TMCO3-210ENST00000620021 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
TMCO3-210ENST00000620021 MED14O60244 1454 aa17■□□□□ 0.31
TMCO3-210ENST00000620021 RIMS1Q86UR5 1692 aaKnown RBP17■□□□□ 0.31
TMCO3-210ENST00000620021 COL3A1P02461 1466 aaPredicted RBP16.99■□□□□ 0.31
TMCO3-210ENST00000620021 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
TMCO3-210ENST00000620021 TTC21BQ7Z4L5 1316 aa16.99■□□□□ 0.31
TMCO3-210ENST00000620021 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
TMCO3-210ENST00000620021 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
TMCO3-210ENST00000620021 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
TMCO3-210ENST00000620021 ARHGAP23Q9P227 1491 aa16.98■□□□□ 0.31
TMCO3-210ENST00000620021 PANK1Q8TE04 598 aa16.98■□□□□ 0.31
TMCO3-210ENST00000620021 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
TMCO3-210ENST00000620021 IQSEC2Q5JU85 1478 aa16.98■□□□□ 0.31
TMCO3-210ENST00000620021 SLIT1O75093 1534 aa16.97■□□□□ 0.31
TMCO3-210ENST00000620021 MAP2P11137 1827 aaKnown RBP16.97■□□□□ 0.31
TMCO3-210ENST00000620021 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
TMCO3-210ENST00000620021 KIF20BQ96Q89 1820 aa16.97■□□□□ 0.31
TMCO3-210ENST00000620021 UBE2Q2Q8WVN8 375 aa16.97■□□□□ 0.31
TMCO3-210ENST00000620021 CLUAP1Q96AJ1 413 aa16.97■□□□□ 0.31
TMCO3-210ENST00000620021 PNPLA6Q8IY17 1366 aa16.96■□□□□ 0.31
TMCO3-210ENST00000620021 WDR63Q8IWG1 891 aa16.96■□□□□ 0.31
TMCO3-210ENST00000620021 NGEFQ8N5V2 710 aa16.95■□□□□ 0.3
TMCO3-210ENST00000620021 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
TMCO3-210ENST00000620021 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
TMCO3-210ENST00000620021 IL13P35225 146 aa16.95■□□□□ 0.3
TMCO3-210ENST00000620021 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.95■□□□□ 0.3
TMCO3-210ENST00000620021 COG6Q9Y2V7 657 aa16.95■□□□□ 0.3
TMCO3-210ENST00000620021 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
TMCO3-210ENST00000620021 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
TMCO3-210ENST00000620021 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
TMCO3-210ENST00000620021 HSP90AB2PQ58FF8 381 aa16.94■□□□□ 0.3
TMCO3-210ENST00000620021 AEBP1Q8IUX7 1158 aa16.94■□□□□ 0.3
TMCO3-210ENST00000620021 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
TMCO3-210ENST00000620021 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
TMCO3-210ENST00000620021 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
TMCO3-210ENST00000620021 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
TMCO3-210ENST00000620021 FCHSD2O94868 740 aa16.93■□□□□ 0.3
TMCO3-210ENST00000620021 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
TMCO3-210ENST00000620021 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
TMCO3-210ENST00000620021 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
TMCO3-210ENST00000620021 PKNOX2Q96KN3 472 aa16.92■□□□□ 0.3
TMCO3-210ENST00000620021 FAM83GA6ND36 823 aa16.91■□□□□ 0.3
TMCO3-210ENST00000620021 DCTN1Q14203 1278 aa16.91■□□□□ 0.3
TMCO3-210ENST00000620021 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
TMCO3-210ENST00000620021 RGPD8O14715 1765 aaPredicted RBP16.9■□□□□ 0.3
TMCO3-210ENST00000620021 USP6P35125 1406 aa16.9■□□□□ 0.3
TMCO3-210ENST00000620021 NEFMP07197 916 aa16.9■□□□□ 0.3
TMCO3-210ENST00000620021 RLBP1P12271 317 aa16.9■□□□□ 0.3
TMCO3-210ENST00000620021 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
TMCO3-210ENST00000620021 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
TMCO3-210ENST00000620021 EIF4A2Q14240 407 aaKnown RBP16.89■□□□□ 0.29
TMCO3-210ENST00000620021 NLRP6P59044 892 aa16.89■□□□□ 0.29
TMCO3-210ENST00000620021 TCERG1O14776 1098 aaKnown RBP16.88■□□□□ 0.29
TMCO3-210ENST00000620021 XPCQ01831 940 aaPredicted RBP16.88■□□□□ 0.29
TMCO3-210ENST00000620021 LRRC7Q96NW7 1537 aa16.88■□□□□ 0.29
TMCO3-210ENST00000620021 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
TMCO3-210ENST00000620021 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
TMCO3-210ENST00000620021 PTCH1Q13635 1447 aa16.86■□□□□ 0.29
TMCO3-210ENST00000620021 DIP2AQ14689 1571 aa16.86■□□□□ 0.29
TMCO3-210ENST00000620021 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
TMCO3-210ENST00000620021 MAP3K19Q56UN5 1328 aa16.86■□□□□ 0.29
TMCO3-210ENST00000620021 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms