RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 A0A1W2PP64 1363 aa17.21■□□□□ 0.35
FOXN3-219ENST00000615335 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.35
FOXN3-219ENST00000615335 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.35
FOXN3-219ENST00000615335 USP32Q8NFA0 1604 aa17.21■□□□□ 0.35
FOXN3-219ENST00000615335 ATF3P18847 181 aa17.2■□□□□ 0.34
FOXN3-219ENST00000615335 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
FOXN3-219ENST00000615335 CC2D1BQ5T0F9 858 aaKnown RBP17.19■□□□□ 0.34
FOXN3-219ENST00000615335 PMFBP1Q8TBY8 1022 aa17.19■□□□□ 0.34
FOXN3-219ENST00000615335 XIRP1Q702N8 1843 aaKnown RBP17.19■□□□□ 0.34
FOXN3-219ENST00000615335 MSH6P52701 1360 aa17.19■□□□□ 0.34
FOXN3-219ENST00000615335 NSD3Q9BZ95 1437 aa17.19■□□□□ 0.34
FOXN3-219ENST00000615335 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
FOXN3-219ENST00000615335 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
FOXN3-219ENST00000615335 TOPAZ1Q8N9V7 1692 aa17.18■□□□□ 0.34
FOXN3-219ENST00000615335 ITSN1Q15811 1721 aa17.18■□□□□ 0.34
FOXN3-219ENST00000615335 PODXL2Q9NZ53 605 aa17.18■□□□□ 0.34
FOXN3-219ENST00000615335 PLEKHG3A1L390 1219 aa17.17■□□□□ 0.34
FOXN3-219ENST00000615335 ESCO1Q5FWF5 840 aa17.17■□□□□ 0.34
FOXN3-219ENST00000615335 NUDCQ9Y266 331 aa17.17■□□□□ 0.34
FOXN3-219ENST00000615335 ACEP12821 1306 aa17.17■□□□□ 0.34
FOXN3-219ENST00000615335 KTN1Q86UP2 1357 aaKnown RBP17.17■□□□□ 0.34
FOXN3-219ENST00000615335 AMER1Q5JTC6 1135 aaPredicted RBP17.16■□□□□ 0.34
FOXN3-219ENST00000615335 CADPS2Q86UW7 1296 aa17.16■□□□□ 0.34
FOXN3-219ENST00000615335 NGDNQ8NEJ9 315 aaKnown RBP17.16■□□□□ 0.34
FOXN3-219ENST00000615335 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
FOXN3-219ENST00000615335 DCCP43146 1447 aa17.15■□□□□ 0.34
FOXN3-219ENST00000615335 CPSF1Q10570 1443 aaKnown RBP17.15■□□□□ 0.34
FOXN3-219ENST00000615335 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
FOXN3-219ENST00000615335 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
FOXN3-219ENST00000615335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.13■□□□□ 0.331e-7■■■□□ 14.8
FOXN3-219ENST00000615335 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
FOXN3-219ENST00000615335 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
FOXN3-219ENST00000615335 RALBP1Q15311 655 aa17.12■□□□□ 0.33
FOXN3-219ENST00000615335 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
FOXN3-219ENST00000615335 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
FOXN3-219ENST00000615335 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
FOXN3-219ENST00000615335 MST1RQ04912 1400 aa17.11■□□□□ 0.33
FOXN3-219ENST00000615335 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
FOXN3-219ENST00000615335 LTBP4Q8N2S1 1624 aa17.11■□□□□ 0.33
FOXN3-219ENST00000615335 NPC1L1Q9UHC9 1359 aa17.11■□□□□ 0.33
FOXN3-219ENST00000615335 NEFMP07197 916 aa17.1■□□□□ 0.33
FOXN3-219ENST00000615335 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
FOXN3-219ENST00000615335 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
FOXN3-219ENST00000615335 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
FOXN3-219ENST00000615335 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
FOXN3-219ENST00000615335 MYBBP1AQ9BQG0 1328 aaKnown RBP17.1■□□□□ 0.33
FOXN3-219ENST00000615335 USP6P35125 1406 aa17.09■□□□□ 0.33
FOXN3-219ENST00000615335 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
FOXN3-219ENST00000615335 FYB1O15117 783 aa17.09■□□□□ 0.33
FOXN3-219ENST00000615335 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
FOXN3-219ENST00000615335 FOXO3O43524 673 aa17.08■□□□□ 0.32
FOXN3-219ENST00000615335 PSME1Q06323 249 aa17.08■□□□□ 0.32
FOXN3-219ENST00000615335 MORC1Q86VD1 984 aa17.08■□□□□ 0.32
FOXN3-219ENST00000615335 SLAIN2Q9P270 581 aa17.07■□□□□ 0.32
FOXN3-219ENST00000615335 NSD2O96028 1365 aa17.06■□□□□ 0.32
FOXN3-219ENST00000615335 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
FOXN3-219ENST00000615335 BRPF3Q9ULD4 1205 aa17.06■□□□□ 0.32
FOXN3-219ENST00000615335 TTC21BQ7Z4L5 1316 aa17.06■□□□□ 0.32
FOXN3-219ENST00000615335 TNNT2P45379 298 aaPredicted RBP17.06■□□□□ 0.32
FOXN3-219ENST00000615335 NME9Q86XW9 330 aa17.06■□□□□ 0.32
FOXN3-219ENST00000615335 ZMYND15Q9H091 742 aa17.06■□□□□ 0.32
FOXN3-219ENST00000615335 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
FOXN3-219ENST00000615335 KIF1AQ12756 1690 aa17.04■□□□□ 0.32
FOXN3-219ENST00000615335 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
FOXN3-219ENST00000615335 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
FOXN3-219ENST00000615335 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
FOXN3-219ENST00000615335 GSE1Q14687 1217 aa17.04■□□□□ 0.32
FOXN3-219ENST00000615335 NRKQ7Z2Y5 1582 aa17.03■□□□□ 0.32
FOXN3-219ENST00000615335 SSH2Q76I76 1423 aa17.02■□□□□ 0.32
FOXN3-219ENST00000615335 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
FOXN3-219ENST00000615335 TTC21AQ8NDW8 1320 aa17.02■□□□□ 0.32
FOXN3-219ENST00000615335 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
FOXN3-219ENST00000615335 BRINP3Q76B58 766 aa17.02■□□□□ 0.32
FOXN3-219ENST00000615335 NLRP13Q86W25 1043 aa17.01■□□□□ 0.31
FOXN3-219ENST00000615335 COG3Q96JB2 828 aa17.01■□□□□ 0.31
FOXN3-219ENST00000615335 KRT28Q7Z3Y7 464 aa17.01■□□□□ 0.31
FOXN3-219ENST00000615335 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
FOXN3-219ENST00000615335 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
FOXN3-219ENST00000615335 ABTB2Q8N961 1025 aa17■□□□□ 0.31
FOXN3-219ENST00000615335 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
FOXN3-219ENST00000615335 NPHP3Q7Z494 1330 aa16.99■□□□□ 0.31
FOXN3-219ENST00000615335 NUTM2GQ5VZR2 741 aa16.98■□□□□ 0.31
FOXN3-219ENST00000615335 NLRP6P59044 892 aa16.98■□□□□ 0.31
FOXN3-219ENST00000615335 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
FOXN3-219ENST00000615335 PIK3C2AO00443 1686 aa16.96■□□□□ 0.31
FOXN3-219ENST00000615335 FBLN1P23142 703 aa16.95■□□□□ 0.3
FOXN3-219ENST00000615335 SOX12O15370 315 aa16.95■□□□□ 0.3
FOXN3-219ENST00000615335 OVOS2A0A0J9YW53 1432 aa16.94■□□□□ 0.3
FOXN3-219ENST00000615335 OVOS2Q6IE36 1432 aa16.94■□□□□ 0.3
FOXN3-219ENST00000615335 TOM1O60784 492 aa16.94■□□□□ 0.3
FOXN3-219ENST00000615335 MTHFSP49914 203 aa16.94■□□□□ 0.3
FOXN3-219ENST00000615335 USP31Q70CQ4 1352 aa16.93■□□□□ 0.3
FOXN3-219ENST00000615335 TRPM3Q9HCF6 1732 aaPredicted RBP16.93■□□□□ 0.3
FOXN3-219ENST00000615335 PDE3BQ13370 1112 aa16.92■□□□□ 0.3
FOXN3-219ENST00000615335 RRP1P56182 461 aaKnown RBP16.92■□□□□ 0.3
FOXN3-219ENST00000615335 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
FOXN3-219ENST00000615335 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
FOXN3-219ENST00000615335 PXDNQ92626 1479 aa16.92■□□□□ 0.3
FOXN3-219ENST00000615335 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
FOXN3-219ENST00000615335 CERKQ8TCT0 537 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms