RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
NOP56-219ENST00000612233 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
NOP56-219ENST00000612233 EDC4Q6P2E9 1401 aaKnown RBP17.93■□□□□ 0.46
NOP56-219ENST00000612233 MSH5O43196 834 aa17.92■□□□□ 0.46
NOP56-219ENST00000612233 SLIT1O75093 1534 aa17.92■□□□□ 0.46
NOP56-219ENST00000612233 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
NOP56-219ENST00000612233 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
NOP56-219ENST00000612233 NALCNQ8IZF0 1738 aa17.91■□□□□ 0.46
NOP56-219ENST00000612233 CDK12Q9NYV4 1490 aaPredicted RBP17.9■□□□□ 0.46
NOP56-219ENST00000612233 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
NOP56-219ENST00000612233 USP54Q70EL1 1684 aa17.9■□□□□ 0.46
NOP56-219ENST00000612233 PPIP5K1Q6PFW1 1433 aa17.9■□□□□ 0.46
NOP56-219ENST00000612233 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
NOP56-219ENST00000612233 MTHFSP49914 203 aa17.89■□□□□ 0.45
NOP56-219ENST00000612233 ARHGAP23Q9P227 1491 aa17.89■□□□□ 0.45
NOP56-219ENST00000612233 PRAM1Q96QH2 718 aa17.88■□□□□ 0.45
NOP56-219ENST00000612233 BACH2Q9BYV9 841 aa17.88■□□□□ 0.45
NOP56-219ENST00000612233 TNRQ92752 1358 aa17.88■□□□□ 0.45
NOP56-219ENST00000612233 MYH16Q9H6N6 1097 aa17.87■□□□□ 0.45
NOP56-219ENST00000612233 FBXO31Q5XUX0 539 aaPredicted RBP17.86■□□□□ 0.45
NOP56-219ENST00000612233 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
NOP56-219ENST00000612233 PLEKHG1Q9ULL1 1385 aa17.86■□□□□ 0.45
NOP56-219ENST00000612233 DEKP35659 375 aaKnown RBP17.85■□□□□ 0.45
NOP56-219ENST00000612233 CABP2Q9NPB3 220 aa17.85■□□□□ 0.45
NOP56-219ENST00000612233 ANP32AP39687 249 aaKnown RBP17.85■□□□□ 0.45
NOP56-219ENST00000612233 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
NOP56-219ENST00000612233 TMEM2Q9UHN6 1383 aa17.85■□□□□ 0.45
NOP56-219ENST00000612233 CCDC146Q8IYE0 955 aa17.85■□□□□ 0.45
NOP56-219ENST00000612233 FYB1O15117 783 aa17.84■□□□□ 0.45
NOP56-219ENST00000612233 BRD2P25440 801 aaKnown RBP17.84■□□□□ 0.45
NOP56-219ENST00000612233 IPO9Q96P70 1041 aaKnown RBP17.84■□□□□ 0.45
NOP56-219ENST00000612233 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
NOP56-219ENST00000612233 RBM10P98175 930 aaKnown RBP17.84■□□□□ 0.45
NOP56-219ENST00000612233 POGKQ9P215 609 aa17.84■□□□□ 0.45
NOP56-219ENST00000612233 MAP2P11137 1827 aaKnown RBP17.84■□□□□ 0.45
NOP56-219ENST00000612233 KCNA4P22459 653 aa17.83■□□□□ 0.45
NOP56-219ENST00000612233 CDK19Q9BWU1 502 aa17.83■□□□□ 0.44
NOP56-219ENST00000612233 SRPK2P78362 688 aaKnown RBP17.82■□□□□ 0.44
NOP56-219ENST00000612233 ZNF428Q96B54 188 aa17.82■□□□□ 0.44
NOP56-219ENST00000612233 ADAMTS13Q76LX8 1427 aa17.82■□□□□ 0.44
NOP56-219ENST00000612233 PDE4AP27815 886 aa17.81■□□□□ 0.44
NOP56-219ENST00000612233 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
NOP56-219ENST00000612233 ZMYND15Q9H091 742 aa17.81■□□□□ 0.44
NOP56-219ENST00000612233 PLIN1O60240 522 aa17.8■□□□□ 0.44
NOP56-219ENST00000612233 XRN1Q8IZH2 1706 aaKnown RBP17.8■□□□□ 0.44
NOP56-219ENST00000612233 RARSP54136 660 aaKnown RBP17.8■□□□□ 0.44
NOP56-219ENST00000612233 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
NOP56-219ENST00000612233 C20orf194Q5TEA3 1177 aa17.8■□□□□ 0.44
NOP56-219ENST00000612233 NOP58Q9Y2X3 529 aaKnown RBP17.8■□□□□ 0.44
NOP56-219ENST00000612233 TPRNQ4KMQ1 711 aa17.79■□□□□ 0.44
NOP56-219ENST00000612233 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
NOP56-219ENST00000612233 FER1L4A9Z1Z3 1794 aa17.79■□□□□ 0.44
NOP56-219ENST00000612233 RGPD1P0DJD0 1748 aa17.79■□□□□ 0.44
NOP56-219ENST00000612233 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.79■□□□□ 0.44
NOP56-219ENST00000612233 FCHSD2O94868 740 aa17.79■□□□□ 0.44
NOP56-219ENST00000612233 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
NOP56-219ENST00000612233 WASLO00401 505 aaPredicted RBP17.78■□□□□ 0.44
NOP56-219ENST00000612233 METP08581 1390 aa17.77■□□□□ 0.43
NOP56-219ENST00000612233 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
NOP56-219ENST00000612233 MINK1Q8N4C8 1332 aaPredicted RBP17.76■□□□□ 0.43
NOP56-219ENST00000612233 MAPK8IP3Q9UPT6 1336 aa17.76■□□□□ 0.43
NOP56-219ENST00000612233 ZNF692Q9BU19 519 aaPredicted RBP17.76■□□□□ 0.43
NOP56-219ENST00000612233 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
NOP56-219ENST00000612233 DDRGK1Q96HY6 314 aa17.75■□□□□ 0.43
NOP56-219ENST00000612233 TMPOP42166 694 aaKnown RBP17.74■□□□□ 0.43
NOP56-219ENST00000612233 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
NOP56-219ENST00000612233 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
NOP56-219ENST00000612233 CLUAP1Q96AJ1 413 aa17.74■□□□□ 0.43
NOP56-219ENST00000612233 NUTM2DQ5VT03 806 aaPredicted RBP17.73■□□□□ 0.43
NOP56-219ENST00000612233 STK26Q9P289 416 aa17.73■□□□□ 0.43
NOP56-219ENST00000612233 FMN2Q9NZ56 1722 aa17.73■□□□□ 0.43
NOP56-219ENST00000612233 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
NOP56-219ENST00000612233 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
NOP56-219ENST00000612233 SENP3-EIF4A1A0A087X0R7 540 aa17.72■□□□□ 0.43
NOP56-219ENST00000612233 U2AF1L5P0DN76 240 aaPredicted RBP17.72■□□□□ 0.43
NOP56-219ENST00000612233 U2AF1Q01081 240 aaKnown RBP eCLIP17.72■□□□□ 0.435e-8■□□□□ 9.4
NOP56-219ENST00000612233 PIK3R4Q99570 1358 aa17.72■□□□□ 0.43
NOP56-219ENST00000612233 FAM161AQ3B820 660 aa17.72■□□□□ 0.43
NOP56-219ENST00000612233 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
NOP56-219ENST00000612233 OVOS2A0A0J9YW53 1432 aa17.72■□□□□ 0.43
NOP56-219ENST00000612233 OVOS2Q6IE36 1432 aa17.72■□□□□ 0.43
NOP56-219ENST00000612233 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
NOP56-219ENST00000612233 BCAR3O75815 825 aa17.71■□□□□ 0.43
NOP56-219ENST00000612233 CABP1Q9NZU7 370 aa17.71■□□□□ 0.43
NOP56-219ENST00000612233 TRIM35Q9UPQ4 493 aa17.71■□□□□ 0.43
NOP56-219ENST00000612233 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
NOP56-219ENST00000612233 ESF1Q9H501 851 aaKnown RBP17.7■□□□□ 0.42
NOP56-219ENST00000612233 USP31Q70CQ4 1352 aa17.7■□□□□ 0.42
NOP56-219ENST00000612233 CCDC61Q9Y6R9 512 aa17.7■□□□□ 0.42
NOP56-219ENST00000612233 ANKARQ7Z5J8 1434 aa17.69■□□□□ 0.42
NOP56-219ENST00000612233 PLEKHG3A1L390 1219 aa17.69■□□□□ 0.42
NOP56-219ENST00000612233 GGNBP2Q9H3C7 697 aa17.69■□□□□ 0.42
NOP56-219ENST00000612233 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
NOP56-219ENST00000612233 KIF16BQ96L93 1317 aa17.66■□□□□ 0.42
NOP56-219ENST00000612233 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
NOP56-219ENST00000612233 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
NOP56-219ENST00000612233 ZKSCAN2Q63HK3 967 aa17.66■□□□□ 0.42
NOP56-219ENST00000612233 LMOD3Q0VAK6 560 aa17.65■□□□□ 0.42
NOP56-219ENST00000612233 C8orf34Q49A92 452 aa17.65■□□□□ 0.42
NOP56-219ENST00000612233 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms