RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 HDAC1Q13547 482 aaPredicted RBP8.12□□□□□ -1.11
HDDC2-205ENST00000608456 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
HDDC2-205ENST00000608456 POTEHQ6S545 545 aa8.12□□□□□ -1.11
HDDC2-205ENST00000608456 MYH16Q9H6N6 1097 aa8.12□□□□□ -1.11
HDDC2-205ENST00000608456 PLCH2O75038 1416 aa8.12□□□□□ -1.11
HDDC2-205ENST00000608456 KDM5AP29375 1690 aaKnown RBP8.11□□□□□ -1.11
HDDC2-205ENST00000608456 NSD2O96028 1365 aa8.11□□□□□ -1.11
HDDC2-205ENST00000608456 ZNF428Q96B54 188 aa8.11□□□□□ -1.11
HDDC2-205ENST00000608456 PNNQ9H307 717 aaKnown RBP8.11□□□□□ -1.11
HDDC2-205ENST00000608456 IL16Q14005 1332 aa8.1□□□□□ -1.11
HDDC2-205ENST00000608456 CLCN6P51797 869 aa8.1□□□□□ -1.11
HDDC2-205ENST00000608456 CLEC17AQ6ZS10 378 aa8.1□□□□□ -1.11
HDDC2-205ENST00000608456 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
HDDC2-205ENST00000608456 IBTKQ9P2D0 1353 aaPredicted RBP8.1□□□□□ -1.11
HDDC2-205ENST00000608456 CEP152O94986 1710 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 ARHGAP5Q13017 1502 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 SYCP2Q9BX26 1530 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 BCAR3O75815 825 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 TPM2P07951 284 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 XRCC6P12956 609 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDDC2-205ENST00000608456 CANXP27824 592 aaKnown RBP8.09□□□□□ -1.11
HDDC2-205ENST00000608456 RBM25P49756 843 aaKnown RBP8.09□□□□□ -1.11
HDDC2-205ENST00000608456 BRPF1P55201 1214 aaPredicted RBP8.09□□□□□ -1.11
HDDC2-205ENST00000608456 TPRNQ4KMQ1 711 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 HS1BP3Q53T59 392 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 CFAP53Q96M91 514 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 POGKQ9P215 609 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 MYO3AQ8NEV4 1616 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 USP32Q8NFA0 1604 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 SETBP1Q9Y6X0 1596 aa8.09□□□□□ -1.11
HDDC2-205ENST00000608456 NRXN1Q9ULB1 1477 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 TRAK2O60296 914 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 MVPQ14764 893 aaKnown RBP8.08□□□□□ -1.12
HDDC2-205ENST00000608456 ZKSCAN2Q63HK3 967 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 SMC5Q8IY18 1101 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 GBP4Q96PP9 640 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 DDX19BQ9UMR2 479 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 PDZRN3Q9UPQ7 1066 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 NCOA3Q9Y6Q9 1424 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 VWDEQ8N2E2 1590 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 ABCC11Q96J66 1382 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.08□□□□□ -1.12
HDDC2-205ENST00000608456 TET3O43151 1660 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 MYOM1P52179 1685 aa8.08□□□□□ -1.12
HDDC2-205ENST00000608456 DEPDC5O75140 1603 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 RPGRIP1LQ68CZ1 1315 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 ARHGAP31Q2M1Z3 1444 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 SOX12O15370 315 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 HSP90AA1P07900 732 aaKnown RBP8.07□□□□□ -1.12
HDDC2-205ENST00000608456 DDIT3P35638 169 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 HSCBQ8IWL3 235 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 PHF12Q96QT6 1004 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 C22orf23Q9BZE7 217 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 SHROOM2Q13796 1616 aa8.07□□□□□ -1.12
HDDC2-205ENST00000608456 UHRF1BP1LA0JNW5 1464 aa8.06□□□□□ -1.12
HDDC2-205ENST00000608456 ERVK-7P63135 1459 aa8.06□□□□□ -1.12
HDDC2-205ENST00000608456 REREQ9P2R6 1566 aa8.06□□□□□ -1.12
HDDC2-205ENST00000608456 IPO8O15397 1037 aaKnown RBP8.06□□□□□ -1.12
HDDC2-205ENST00000608456 MAP7D2Q96T17 732 aa8.06□□□□□ -1.12
HDDC2-205ENST00000608456 RRAGDQ9NQL2 400 aaPredicted RBP8.06□□□□□ -1.12
HDDC2-205ENST00000608456 COG6Q9Y2V7 657 aa8.06□□□□□ -1.12
HDDC2-205ENST00000608456 FANCAO15360 1455 aa8.06□□□□□ -1.12
HDDC2-205ENST00000608456 IQSEC2Q5JU85 1478 aa8.06□□□□□ -1.12
HDDC2-205ENST00000608456 MAP3K4Q9Y6R4 1608 aa8.05□□□□□ -1.12
HDDC2-205ENST00000608456 ESPNB1AK53 854 aa8.05□□□□□ -1.12
HDDC2-205ENST00000608456 SEC24BO95487 1268 aa8.05□□□□□ -1.12
HDDC2-205ENST00000608456 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
HDDC2-205ENST00000608456 MFRPQ9BY79 579 aa8.05□□□□□ -1.12
HDDC2-205ENST00000608456 GRPEL1Q9HAV7 217 aa8.05□□□□□ -1.12
HDDC2-205ENST00000608456 PCDHB15Q9Y5E8 787 aa8.05□□□□□ -1.12
HDDC2-205ENST00000608456 SENP3-EIF4A1A0A087X0R7 540 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 GOLGA6L22H0YM25 854 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 NLRP6P59044 892 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 CCDC173Q0VFZ6 552 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 HSP90AA2PQ14568 343 aaPredicted RBP8.04□□□□□ -1.12
HDDC2-205ENST00000608456 ALDH1L2Q3SY69 923 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 MTERF4Q7Z6M4 381 aaKnown RBP8.04□□□□□ -1.12
HDDC2-205ENST00000608456 SKAP1Q86WV1 359 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 TCP11L2Q8N4U5 519 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 PANK1Q8TE04 598 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 PPP1R9BQ96SB3 815 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 CARD14Q9BXL6 1004 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 PDCL3Q9H2J4 239 aa8.04□□□□□ -1.12
HDDC2-205ENST00000608456 ABCC1P33527 1531 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 LMTK2Q8IWU2 1503 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 ZNF518AQ6AHZ1 1483 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 MCM5P33992 734 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 TIE1P35590 1138 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 RAB3GAP1Q15042 981 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 MORC1Q86VD1 984 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 FBXO22Q8NEZ5 403 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 ARHGAP45Q92619 1136 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 ANP32BQ92688 251 aaKnown RBP8.03□□□□□ -1.12
HDDC2-205ENST00000608456 GCC1Q96CN9 775 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 TRIM44Q96DX7 344 aaPredicted RBP8.03□□□□□ -1.12
HDDC2-205ENST00000608456 MS4A3Q96HJ5 214 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 SLKQ9H2G2 1235 aaPredicted RBP8.03□□□□□ -1.12
HDDC2-205ENST00000608456 YEATS2Q9ULM3 1422 aa8.03□□□□□ -1.12
HDDC2-205ENST00000608456 SPAG9O60271 1321 aaKnown RBP8.03□□□□□ -1.12
HDDC2-205ENST00000608456 BMP2KLQ5H9B9 411 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms