RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 IRF5Q13568 498 aa7.97□□□□□ -1.13
RNU6-88P-201ENST00000606801 PTPRNQ16849 979 aa7.97□□□□□ -1.13
RNU6-88P-201ENST00000606801 TRAK2O60296 914 aa7.96□□□□□ -1.14
RNU6-88P-201ENST00000606801 EVA1BQ9NVM1 165 aa7.96□□□□□ -1.14
RNU6-88P-201ENST00000606801 MAP10Q9P2G4 905 aa7.96□□□□□ -1.14
RNU6-88P-201ENST00000606801 GFRA3O60609 400 aa7.95□□□□□ -1.14
RNU6-88P-201ENST00000606801 ZNF697Q5TEC3 545 aa7.95□□□□□ -1.14
RNU6-88P-201ENST00000606801 PTCRAQ6ISU1 281 aaPredicted RBP7.95□□□□□ -1.14
RNU6-88P-201ENST00000606801 C1orf115Q9H7X2 142 aa7.95□□□□□ -1.14
RNU6-88P-201ENST00000606801 ZBTB24O43167 697 aaPredicted RBP7.94□□□□□ -1.14
RNU6-88P-201ENST00000606801 CD2BP2O95400 341 aaKnown RBP7.94□□□□□ -1.14
RNU6-88P-201ENST00000606801 LAPTM4AQ15012 233 aa7.94□□□□□ -1.14
RNU6-88P-201ENST00000606801 TRIM67Q6ZTA4 783 aa7.94□□□□□ -1.14
RNU6-88P-201ENST00000606801 PROSER2Q86WR7 435 aaPredicted RBP7.94□□□□□ -1.14
RNU6-88P-201ENST00000606801 CCDC24Q8N4L8 307 aa7.94□□□□□ -1.14
RNU6-88P-201ENST00000606801 NUDT12Q9BQG2 462 aa7.94□□□□□ -1.14
RNU6-88P-201ENST00000606801 RAD21O60216 631 aa7.93□□□□□ -1.14
RNU6-88P-201ENST00000606801 CCNYL3P0C7X3 344 aa7.93□□□□□ -1.14
RNU6-88P-201ENST00000606801 ABL2P42684 1182 aa7.93□□□□□ -1.14
RNU6-88P-201ENST00000606801 KCNH2Q12809 1159 aa7.93□□□□□ -1.14
RNU6-88P-201ENST00000606801 NDUFB9Q9Y6M9 179 aa7.93□□□□□ -1.14
RNU6-88P-201ENST00000606801 PDZRN3Q9UPQ7 1066 aa7.92□□□□□ -1.14
RNU6-88P-201ENST00000606801 ARID3CA6NKF2 412 aa7.91□□□□□ -1.14
RNU6-88P-201ENST00000606801 GDF9O60383 454 aa7.91□□□□□ -1.14
RNU6-88P-201ENST00000606801 PRR20EP86478 221 aa7.91□□□□□ -1.14
RNU6-88P-201ENST00000606801 PRR20CP86479 221 aa7.91□□□□□ -1.14
RNU6-88P-201ENST00000606801 PRR20DP86480 221 aa7.91□□□□□ -1.14
RNU6-88P-201ENST00000606801 PRR20BP86481 221 aa7.91□□□□□ -1.14
RNU6-88P-201ENST00000606801 PRR20AP86496 221 aa7.91□□□□□ -1.14
RNU6-88P-201ENST00000606801 APBB1O00213 710 aa7.9□□□□□ -1.14
RNU6-88P-201ENST00000606801 NRG2O14511 850 aaPredicted RBP7.9□□□□□ -1.14
RNU6-88P-201ENST00000606801 CTHP32929 405 aa7.9□□□□□ -1.14
RNU6-88P-201ENST00000606801 TRIM32Q13049 653 aa7.9□□□□□ -1.14
RNU6-88P-201ENST00000606801 ZNF777Q9ULD5 760 aaPredicted RBP7.9□□□□□ -1.14
RNU6-88P-201ENST00000606801 POM121CA8CG34 1229 aa7.89□□□□□ -1.15
RNU6-88P-201ENST00000606801 PKD2L1Q9P0L9 805 aa7.89□□□□□ -1.15
RNU6-88P-201ENST00000606801 OCSTAMPQ9BR26 566 aa7.88□□□□□ -1.15
RNU6-88P-201ENST00000606801 FKBPLQ9UIM3 349 aa7.88□□□□□ -1.15
RNU6-88P-201ENST00000606801 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
RNU6-88P-201ENST00000606801 TNFRSF10AO00220 468 aa7.87□□□□□ -1.15
RNU6-88P-201ENST00000606801 FOXC1Q12948 553 aa7.87□□□□□ -1.15
RNU6-88P-201ENST00000606801 UNC93B1Q9H1C4 597 aa7.87□□□□□ -1.15
RNU6-88P-201ENST00000606801 PRM3Q9NNZ6 103 aa7.87□□□□□ -1.15
RNU6-88P-201ENST00000606801 VAC14Q08AM6 782 aa7.86□□□□□ -1.15
RNU6-88P-201ENST00000606801 ADAMTS19Q8TE59 1207 aa7.86□□□□□ -1.15
RNU6-88P-201ENST00000606801 WNT7AO00755 349 aa7.85□□□□□ -1.15
RNU6-88P-201ENST00000606801 FBXO45P0C2W1 286 aa7.85□□□□□ -1.15
RNU6-88P-201ENST00000606801 SKOR1P84550 965 aa7.85□□□□□ -1.15
RNU6-88P-201ENST00000606801 Q6ZNB5 142 aa7.85□□□□□ -1.15
RNU6-88P-201ENST00000606801 WNT7BP56706 349 aa7.84□□□□□ -1.15
RNU6-88P-201ENST00000606801 ZC3H4Q9UPT8 1303 aaKnown RBP7.83□□□□□ -1.16
RNU6-88P-201ENST00000606801 PDXDC2PQ6P474 469 aa7.83□□□□□ -1.16
RNU6-88P-201ENST00000606801 BAP1Q92560 729 aa7.83□□□□□ -1.16
RNU6-88P-201ENST00000606801 SH3BP2P78314 561 aa7.82□□□□□ -1.16
RNU6-88P-201ENST00000606801 WASHC4Q2M389 1173 aa7.82□□□□□ -1.16
RNU6-88P-201ENST00000606801 RC3H1Q5TC82 1133 aaKnown RBP7.82□□□□□ -1.16
RNU6-88P-201ENST00000606801 SH3BP5LQ7L8J4 393 aa7.82□□□□□ -1.16
RNU6-88P-201ENST00000606801 SH3RF1Q7Z6J0 888 aa7.82□□□□□ -1.16
RNU6-88P-201ENST00000606801 MRGPRX2Q96LB1 330 aa7.82□□□□□ -1.16
RNU6-88P-201ENST00000606801 ALG2Q9H553 416 aa7.82□□□□□ -1.16
RNU6-88P-201ENST00000606801 TOR4AQ9NXH8 423 aa7.82□□□□□ -1.16
RNU6-88P-201ENST00000606801 ZBBXA8MT70 800 aa7.81□□□□□ -1.16
RNU6-88P-201ENST00000606801 LCE2BO14633 110 aa7.81□□□□□ -1.16
RNU6-88P-201ENST00000606801 NR1H3Q13133 447 aa7.81□□□□□ -1.16
RNU6-88P-201ENST00000606801 LINC01559Q495D7 138 aa7.81□□□□□ -1.16
RNU6-88P-201ENST00000606801 C4orf48Q5BLP8 95 aa7.81□□□□□ -1.16
RNU6-88P-201ENST00000606801 ARMC2Q8NEN0 867 aa7.81□□□□□ -1.16
RNU6-88P-201ENST00000606801 GPKOWQ92917 476 aaPredicted RBP eCLIP7.81□□□□□ -1.16
RNU6-88P-201ENST00000606801 FOXJ1Q92949 421 aa7.81□□□□□ -1.16
RNU6-88P-201ENST00000606801 DGAT1O75907 488 aa7.8□□□□□ -1.16
RNU6-88P-201ENST00000606801 HDGFL1Q5TGJ6 251 aa7.8□□□□□ -1.16
RNU6-88P-201ENST00000606801 TRAF7Q6Q0C0 670 aa7.8□□□□□ -1.16
RNU6-88P-201ENST00000606801 CYP4X1Q8N118 509 aa7.8□□□□□ -1.16
RNU6-88P-201ENST00000606801 PKDCCQ504Y2 493 aa7.79□□□□□ -1.16
RNU6-88P-201ENST00000606801 ZNF511Q8NB15 262 aa7.79□□□□□ -1.16
RNU6-88P-201ENST00000606801 PNMA1Q8ND90 353 aa7.79□□□□□ -1.16
RNU6-88P-201ENST00000606801 SNIP1Q8TAD8 396 aaKnown RBP7.79□□□□□ -1.16
RNU6-88P-201ENST00000606801 GLMNQ92990 594 aa7.79□□□□□ -1.16
RNU6-88P-201ENST00000606801 GPSM3Q9Y4H4 160 aa7.79□□□□□ -1.16
RNU6-88P-201ENST00000606801 FAM187AA6NFU0 413 aa7.78□□□□□ -1.16
RNU6-88P-201ENST00000606801 NBPF14Q5TI25 921 aa7.78□□□□□ -1.16
RNU6-88P-201ENST00000606801 WWC1Q8IX03 1113 aa7.78□□□□□ -1.16
RNU6-88P-201ENST00000606801 CCDC82Q8N4S0 544 aa7.78□□□□□ -1.16
RNU6-88P-201ENST00000606801 TTC24A2A3L6 582 aaPredicted RBP7.77□□□□□ -1.17
RNU6-88P-201ENST00000606801 SIAH2O43255 324 aa7.77□□□□□ -1.17
RNU6-88P-201ENST00000606801 PTK2Q05397 1052 aa7.77□□□□□ -1.17
RNU6-88P-201ENST00000606801 EHBP1Q8NDI1 1231 aa7.77□□□□□ -1.17
RNU6-88P-201ENST00000606801 ADAM32Q8TC27 787 aa7.77□□□□□ -1.17
RNU6-88P-201ENST00000606801 CALR3Q96L12 384 aaKnown RBP7.76□□□□□ -1.17
RNU6-88P-201ENST00000606801 ARHGAP9Q9BRR9 750 aa7.76□□□□□ -1.17
RNU6-88P-201ENST00000606801 SMPD1P17405 629 aa7.75□□□□□ -1.17
RNU6-88P-201ENST00000606801 VARSP26640 1264 aaKnown RBP7.75□□□□□ -1.17
RNU6-88P-201ENST00000606801 MYT1Q01538 1121 aa7.75□□□□□ -1.17
RNU6-88P-201ENST00000606801 UCN2Q96RP3 112 aa7.75□□□□□ -1.17
RNU6-88P-201ENST00000606801 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
RNU6-88P-201ENST00000606801 J3QL48 77 aa7.74□□□□□ -1.17
RNU6-88P-201ENST00000606801 AVPP01185 164 aa7.74□□□□□ -1.17
RNU6-88P-201ENST00000606801 ERFEQ4G0M1 354 aa7.74□□□□□ -1.17
RNU6-88P-201ENST00000606801 ARID3AQ99856 593 aa7.74□□□□□ -1.17
RNU6-88P-201ENST00000606801 MAGEB6P1A0A0J9YX57 407 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms