RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 EFCAB2Q5VUJ9 269 aa11.38□□□□□ -0.59
FARP1-239ENST00000602171 MAP3K4Q9Y6R4 1608 aa11.38□□□□□ -0.59
FARP1-239ENST00000602171 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
FARP1-239ENST00000602171 KIF13AQ9H1H9 1805 aa11.37□□□□□ -0.59
FARP1-239ENST00000602171 TLL1O43897 1013 aa11.37□□□□□ -0.59
FARP1-239ENST00000602171 SCUBE3Q8IX30 993 aa11.37□□□□□ -0.59
FARP1-239ENST00000602171 NCOA2Q15596 1464 aa11.37□□□□□ -0.59
FARP1-239ENST00000602171 ARAP3Q8WWN8 1544 aa11.36□□□□□ -0.59
FARP1-239ENST00000602171 GPR37O15354 613 aa11.36□□□□□ -0.59
FARP1-239ENST00000602171 SULF1Q8IWU6 871 aa11.36□□□□□ -0.59
FARP1-239ENST00000602171 CFDP1Q9UEE9 299 aaPredicted RBP11.36□□□□□ -0.59
FARP1-239ENST00000602171 TULP1O00294 542 aaPredicted RBP11.35□□□□□ -0.59
FARP1-239ENST00000602171 S1PR4O95977 384 aa11.35□□□□□ -0.59
FARP1-239ENST00000602171 FECHP22830 423 aa11.35□□□□□ -0.59
FARP1-239ENST00000602171 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
FARP1-239ENST00000602171 RDH13Q8NBN7 331 aa11.35□□□□□ -0.59
FARP1-239ENST00000602171 SLC6A16Q9GZN6 736 aa11.35□□□□□ -0.59
FARP1-239ENST00000602171 TTC37Q6PGP7 1564 aa11.35□□□□□ -0.59
FARP1-239ENST00000602171 FANCAO15360 1455 aa11.34□□□□□ -0.59
FARP1-239ENST00000602171 NEO1Q92859 1461 aa11.34□□□□□ -0.59
FARP1-239ENST00000602171 ARHGAP5Q13017 1502 aa11.34□□□□□ -0.59
FARP1-239ENST00000602171 GPATCH8Q9UKJ3 1502 aaKnown RBP11.34□□□□□ -0.59
FARP1-239ENST00000602171 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
FARP1-239ENST00000602171 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
FARP1-239ENST00000602171 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
FARP1-239ENST00000602171 CFAP74Q9C0B2 1584 aa11.33□□□□□ -0.6
FARP1-239ENST00000602171 MYO5CQ9NQX4 1742 aa11.32□□□□□ -0.6
FARP1-239ENST00000602171 MIA2Q96PC5 1412 aa11.32□□□□□ -0.6
FARP1-239ENST00000602171 DDX11L8A8MPP1 907 aa11.31□□□□□ -0.6
FARP1-239ENST00000602171 SPSB2Q99619 263 aa11.31□□□□□ -0.6
FARP1-239ENST00000602171 ZNF777Q9ULD5 760 aaPredicted RBP11.31□□□□□ -0.6
FARP1-239ENST00000602171 MYOM3Q5VTT5 1437 aa11.31□□□□□ -0.6
FARP1-239ENST00000602171 AKNAQ7Z591 1439 aa11.31□□□□□ -0.6
FARP1-239ENST00000602171 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
FARP1-239ENST00000602171 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
FARP1-239ENST00000602171 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
FARP1-239ENST00000602171 PPARGC1BQ86YN6 1023 aaKnown RBP11.3□□□□□ -0.6
FARP1-239ENST00000602171 PREX2Q70Z35 1606 aa11.3□□□□□ -0.6
FARP1-239ENST00000602171 PLEKHH2Q8IVE3 1493 aa11.3□□□□□ -0.6
FARP1-239ENST00000602171 TSPOAP1O95153 1857 aa11.29□□□□□ -0.6
FARP1-239ENST00000602171 LCE2BO14633 110 aa11.29□□□□□ -0.6
FARP1-239ENST00000602171 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
FARP1-239ENST00000602171 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
FARP1-239ENST00000602171 ADGRL1O94910 1474 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 GCGRP47871 477 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 PRR20EP86478 221 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 PRR20CP86479 221 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 PRR20DP86480 221 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 PRR20BP86481 221 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 PRR20AP86496 221 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
FARP1-239ENST00000602171 KIAA1107Q9UPP5 1409 aa11.27□□□□□ -0.6
FARP1-239ENST00000602171 PPRC1Q5VV67 1664 aaKnown RBP11.27□□□□□ -0.6
FARP1-239ENST00000602171 MORN1Q5T089 497 aa11.27□□□□□ -0.61
FARP1-239ENST00000602171 EMID1Q96A84 441 aaPredicted RBP11.27□□□□□ -0.61
FARP1-239ENST00000602171 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
FARP1-239ENST00000602171 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
FARP1-239ENST00000602171 DENND4BO75064 1496 aaPredicted RBP11.26□□□□□ -0.61
FARP1-239ENST00000602171 FUT2Q10981 343 aa11.26□□□□□ -0.61
FARP1-239ENST00000602171 ZNF697Q5TEC3 545 aa11.26□□□□□ -0.61
FARP1-239ENST00000602171 LIAT1Q6ZQX7 453 aa11.26□□□□□ -0.61
FARP1-239ENST00000602171 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
FARP1-239ENST00000602171 CDC42BPBQ9Y5S2 1711 aa11.26□□□□□ -0.61
FARP1-239ENST00000602171 FGD6Q6ZV73 1430 aa11.26□□□□□ -0.61
FARP1-239ENST00000602171 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
FARP1-239ENST00000602171 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
FARP1-239ENST00000602171 KDM6BO15054 1643 aa11.24□□□□□ -0.61
FARP1-239ENST00000602171 DGAT1O75907 488 aa11.24□□□□□ -0.61
FARP1-239ENST00000602171 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
FARP1-239ENST00000602171 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
FARP1-239ENST00000602171 PKDCCQ504Y2 493 aa11.24□□□□□ -0.61
FARP1-239ENST00000602171 ZNF518AQ6AHZ1 1483 aa11.24□□□□□ -0.61
FARP1-239ENST00000602171 ABCC1P33527 1531 aa11.24□□□□□ -0.61
FARP1-239ENST00000602171 RAPGEF3O95398 923 aa11.23□□□□□ -0.61
FARP1-239ENST00000602171 HNRNPMP52272 730 aaKnown RBP eCLIP11.23□□□□□ -0.61
FARP1-239ENST00000602171 MAP2K5Q13163 448 aa11.23□□□□□ -0.61
FARP1-239ENST00000602171 FAM50AQ14320 339 aaKnown RBP11.23□□□□□ -0.61
FARP1-239ENST00000602171 PHOX2BQ99453 314 aa11.23□□□□□ -0.61
FARP1-239ENST00000602171 ZNF644Q9H582 1327 aaPredicted RBP11.23□□□□□ -0.61
FARP1-239ENST00000602171 POGZQ7Z3K3 1410 aa11.23□□□□□ -0.61
FARP1-239ENST00000602171 CAMSAP2Q08AD1 1489 aa11.23□□□□□ -0.61
FARP1-239ENST00000602171 LMOD2Q6P5Q4 547 aa11.22□□□□□ -0.61
FARP1-239ENST00000602171 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
FARP1-239ENST00000602171 THAP11Q96EK4 314 aa11.22□□□□□ -0.61
FARP1-239ENST00000602171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.22□□□□□ -0.61
FARP1-239ENST00000602171 PTPN23Q9H3S7 1636 aa11.21□□□□□ -0.61
FARP1-239ENST00000602171 SYCP2Q9BX26 1530 aa11.21□□□□□ -0.61
FARP1-239ENST00000602171 TCOF1Q13428 1488 aaKnown RBP11.21□□□□□ -0.61
FARP1-239ENST00000602171 RPIAP49247 311 aa11.21□□□□□ -0.61
FARP1-239ENST00000602171 AFAP1Q8N556 730 aa11.21□□□□□ -0.61
FARP1-239ENST00000602171 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
FARP1-239ENST00000602171 SLC27A5Q9Y2P5 690 aa11.21□□□□□ -0.61
FARP1-239ENST00000602171 MAGI2Q86UL8 1455 aa11.2□□□□□ -0.62
FARP1-239ENST00000602171 SPAG9O60271 1321 aaKnown RBP11.2□□□□□ -0.62
FARP1-239ENST00000602171 CCDC141Q6ZP82 1450 aa11.19□□□□□ -0.62
FARP1-239ENST00000602171 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
FARP1-239ENST00000602171 COL17A1Q9UMD9 1497 aaPredicted RBP11.19□□□□□ -0.62
FARP1-239ENST00000602171 RRBP1Q9P2E9 1410 aaKnown RBP11.19□□□□□ -0.62
FARP1-239ENST00000602171 GDF9O60383 454 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms