RNA–Protein interactions for RNA: ENST00000597596.1

FARP1-221, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-221ENST00000597596 PRDM11Q9NQV5 511 aa8.74□□□□□ -1.01
FARP1-221ENST00000597596 STRN4Q9NRL3 753 aa8.74□□□□□ -1.01
FARP1-221ENST00000597596 SLIT2O94813 1529 aa8.74□□□□□ -1.01
FARP1-221ENST00000597596 USP32Q8NFA0 1604 aa8.73□□□□□ -1.01
FARP1-221ENST00000597596 RALGAPBQ86X10 1494 aa8.73□□□□□ -1.01
FARP1-221ENST00000597596 ZBTB7CA1YPR0 619 aa8.73□□□□□ -1.01
FARP1-221ENST00000597596 ONECUT3O60422 494 aaPredicted RBP8.73□□□□□ -1.01
FARP1-221ENST00000597596 EVA1CP58658 441 aa8.73□□□□□ -1.01
FARP1-221ENST00000597596 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
FARP1-221ENST00000597596 KRT27Q7Z3Y8 459 aa8.73□□□□□ -1.01
FARP1-221ENST00000597596 KIF1AQ12756 1690 aa8.72□□□□□ -1.01
FARP1-221ENST00000597596 DEFB132Q7Z7B7 95 aa8.72□□□□□ -1.01
FARP1-221ENST00000597596 USP35Q9P2H5 1018 aa8.72□□□□□ -1.01
FARP1-221ENST00000597596 TULP4Q9NRJ4 1543 aa8.71□□□□□ -1.01
FARP1-221ENST00000597596 CCDC125Q86Z20 511 aa8.71□□□□□ -1.02
FARP1-221ENST00000597596 KIAA0232Q92628 1395 aa8.71□□□□□ -1.02
FARP1-221ENST00000597596 NLRP6P59044 892 aa8.7□□□□□ -1.02
FARP1-221ENST00000597596 SF3B2Q13435 895 aaKnown RBP8.7□□□□□ -1.02
FARP1-221ENST00000597596 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
FARP1-221ENST00000597596 ZRANB1Q9UGI0 708 aa8.7□□□□□ -1.02
FARP1-221ENST00000597596 SPATA31A5Q5VU36 1347 aa8.7□□□□□ -1.02
FARP1-221ENST00000597596 EVC2Q86UK5 1308 aa8.7□□□□□ -1.02
FARP1-221ENST00000597596 SPATA31A7Q8IWB4 1347 aa8.7□□□□□ -1.02
FARP1-221ENST00000597596 GCP02774 474 aa8.69□□□□□ -1.02
FARP1-221ENST00000597596 POLR3AO14802 1390 aaPredicted RBP8.69□□□□□ -1.02
FARP1-221ENST00000597596 ROCK2O75116 1388 aaKnown RBP8.69□□□□□ -1.02
FARP1-221ENST00000597596 PPIP5K1Q6PFW1 1433 aa8.69□□□□□ -1.02
FARP1-221ENST00000597596 ATP7BP35670 1465 aa8.69□□□□□ -1.02
FARP1-221ENST00000597596 ADGRB2O60241 1585 aa8.69□□□□□ -1.02
FARP1-221ENST00000597596 SOX12O15370 315 aa8.68□□□□□ -1.02
FARP1-221ENST00000597596 LARP1Q6PKG0 1096 aaKnown RBP8.68□□□□□ -1.02
FARP1-221ENST00000597596 CARD11Q9BXL7 1154 aa8.68□□□□□ -1.02
FARP1-221ENST00000597596 GLI3P10071 1580 aa8.68□□□□□ -1.02
FARP1-221ENST00000597596 ARHGEF28Q8N1W1 1705 aaKnown RBP8.67□□□□□ -1.02
FARP1-221ENST00000597596 TMC1Q8TDI8 760 aa8.67□□□□□ -1.02
FARP1-221ENST00000597596 MARF1Q9Y4F3 1742 aaKnown RBP8.67□□□□□ -1.02
FARP1-221ENST00000597596 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
FARP1-221ENST00000597596 SPATA31A1Q5TZJ5 1347 aa8.66□□□□□ -1.02
FARP1-221ENST00000597596 EN1Q05925 392 aaPredicted RBP8.66□□□□□ -1.02
FARP1-221ENST00000597596 ZNF692Q9BU19 519 aaPredicted RBP8.66□□□□□ -1.02
FARP1-221ENST00000597596 TTC21BQ7Z4L5 1316 aa8.65□□□□□ -1.02
FARP1-221ENST00000597596 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
FARP1-221ENST00000597596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.65□□□□□ -1.02
FARP1-221ENST00000597596 SLC12A5Q9H2X9 1139 aa8.65□□□□□ -1.02
FARP1-221ENST00000597596 AXIN2Q9Y2T1 843 aa8.65□□□□□ -1.02
FARP1-221ENST00000597596 BLMP54132 1417 aaPredicted RBP8.64□□□□□ -1.03
FARP1-221ENST00000597596 TONSLQ96HA7 1378 aa8.64□□□□□ -1.03
FARP1-221ENST00000597596 EP400Q96L91 3159 aa8.64□□□□□ -1.03
FARP1-221ENST00000597596 KIAA1210Q9ULL0 1709 aa8.64□□□□□ -1.03
FARP1-221ENST00000597596 TRIM37O94972 964 aa8.64□□□□□ -1.03
FARP1-221ENST00000597596 BAG6P46379 1132 aa8.64□□□□□ -1.03
FARP1-221ENST00000597596 TCP11L2Q8N4U5 519 aa8.64□□□□□ -1.03
FARP1-221ENST00000597596 CCER1Q8TC90 406 aaPredicted RBP8.64□□□□□ -1.03
FARP1-221ENST00000597596 ALS2Q96Q42 1657 aa8.64□□□□□ -1.03
FARP1-221ENST00000597596 USP19O94966 1318 aa8.63□□□□□ -1.03
FARP1-221ENST00000597596 ST20-MTHFSA0A0A6YYL1 179 aa8.63□□□□□ -1.03
FARP1-221ENST00000597596 PSDA5PKW4 1024 aaPredicted RBP8.63□□□□□ -1.03
FARP1-221ENST00000597596 FAM196AQ6ZSG2 479 aa8.63□□□□□ -1.03
FARP1-221ENST00000597596 TOM1L2Q6ZVM7 507 aa8.63□□□□□ -1.03
FARP1-221ENST00000597596 BRWD3Q6RI45 1802 aa8.63□□□□□ -1.03
FARP1-221ENST00000597596 APBA3O96018 575 aa8.62□□□□□ -1.03
FARP1-221ENST00000597596 EZH2Q15910 746 aaKnown RBP8.62□□□□□ -1.03
FARP1-221ENST00000597596 BARGINQ6ZT62 677 aa8.62□□□□□ -1.03
FARP1-221ENST00000597596 ARHGEF25Q86VW2 580 aa8.62□□□□□ -1.03
FARP1-221ENST00000597596 NME9Q86XW9 330 aa8.62□□□□□ -1.03
FARP1-221ENST00000597596 COL14A1Q05707 1796 aaKnown RBP8.62□□□□□ -1.03
FARP1-221ENST00000597596 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.62□□□□□ -1.03
FARP1-221ENST00000597596 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
FARP1-221ENST00000597596 CAMTA1Q9Y6Y1 1673 aa8.62□□□□□ -1.03
FARP1-221ENST00000597596 USP6P35125 1406 aa8.62□□□□□ -1.03
FARP1-221ENST00000597596 CPDO75976 1380 aa8.61□□□□□ -1.03
FARP1-221ENST00000597596 KTN1Q86UP2 1357 aaKnown RBP8.61□□□□□ -1.03
FARP1-221ENST00000597596 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
FARP1-221ENST00000597596 CSB-PGBD3P0DP91 1061 aa8.61□□□□□ -1.03
FARP1-221ENST00000597596 SSH2Q76I76 1423 aa8.61□□□□□ -1.03
FARP1-221ENST00000597596 SRCAPQ6ZRS2 3230 aa8.61□□□□□ -1.03
FARP1-221ENST00000597596 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
FARP1-221ENST00000597596 ABCA3Q99758 1704 aa8.6□□□□□ -1.03
FARP1-221ENST00000597596 HDGFL2Q7Z4V5 671 aaPredicted RBP8.6□□□□□ -1.03
FARP1-221ENST00000597596 KCNH5Q8NCM2 988 aa8.6□□□□□ -1.03
FARP1-221ENST00000597596 ITSN1Q15811 1721 aa8.6□□□□□ -1.03
FARP1-221ENST00000597596 TTC21AQ8NDW8 1320 aa8.59□□□□□ -1.03
FARP1-221ENST00000597596 CLSPNQ9HAW4 1339 aa8.59□□□□□ -1.03
FARP1-221ENST00000597596 TRPM1Q7Z4N2 1603 aa8.59□□□□□ -1.03
FARP1-221ENST00000597596 FBLN1P23142 703 aa8.59□□□□□ -1.03
FARP1-221ENST00000597596 R3HDM1Q15032 1099 aaKnown RBP8.59□□□□□ -1.03
FARP1-221ENST00000597596 CAMKK2Q96RR4 588 aa8.59□□□□□ -1.03
FARP1-221ENST00000597596 THRAP3Q9Y2W1 955 aaKnown RBP8.59□□□□□ -1.03
FARP1-221ENST00000597596 AATKQ6ZMQ8 1374 aa8.59□□□□□ -1.03
FARP1-221ENST00000597596 QRICH2Q9H0J4 1663 aa8.59□□□□□ -1.03
FARP1-221ENST00000597596 NRAPQ86VF7 1730 aa8.58□□□□□ -1.04
FARP1-221ENST00000597596 CPSF1Q10570 1443 aaKnown RBP8.58□□□□□ -1.04
FARP1-221ENST00000597596 ZEB1P37275 1124 aaPredicted RBP8.58□□□□□ -1.04
FARP1-221ENST00000597596 DDB1Q16531 1140 aa8.58□□□□□ -1.04
FARP1-221ENST00000597596 PTF1AQ7RTS3 328 aa8.58□□□□□ -1.04
FARP1-221ENST00000597596 TESK2Q96S53 571 aa8.58□□□□□ -1.04
FARP1-221ENST00000597596 TERF2IPQ9NYB0 399 aa8.58□□□□□ -1.04
FARP1-221ENST00000597596 TOPAZ1Q8N9V7 1692 aa8.58□□□□□ -1.04
FARP1-221ENST00000597596 EXOC5O00471 708 aa8.57□□□□□ -1.04
FARP1-221ENST00000597596 MARCH10Q8NA82 808 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms