RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 GAS2L2Q8NHY3 880 aa15.44■□□□□ 0.06
DNMT1-228ENST00000592705 TRAK2O60296 914 aa15.43■□□□□ 0.06
DNMT1-228ENST00000592705 MCTP1Q6DN14 999 aa15.43■□□□□ 0.06
DNMT1-228ENST00000592705 FAM177BA6PVY3 158 aa15.43■□□□□ 0.06
DNMT1-228ENST00000592705 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
DNMT1-228ENST00000592705 GCC1Q96CN9 775 aa15.43■□□□□ 0.06
DNMT1-228ENST00000592705 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
DNMT1-228ENST00000592705 ABCC5O15440 1437 aa15.43■□□□□ 0.06
DNMT1-228ENST00000592705 GOLGA6L19H0YKK7 550 aa15.42■□□□□ 0.06
DNMT1-228ENST00000592705 HSP90AB4PQ58FF6 505 aa15.42■□□□□ 0.06
DNMT1-228ENST00000592705 FAM43AQ8N2R8 423 aa15.42■□□□□ 0.06
DNMT1-228ENST00000592705 KCNH5Q8NCM2 988 aa15.42■□□□□ 0.06
DNMT1-228ENST00000592705 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
DNMT1-228ENST00000592705 RTEL1-TNFRSF6BF6WH68 1400 aa15.42■□□□□ 0.06
DNMT1-228ENST00000592705 MSH6P52701 1360 aa15.42■□□□□ 0.06
DNMT1-228ENST00000592705 IFIT2P09913 472 aaKnown RBP15.41■□□□□ 0.06
DNMT1-228ENST00000592705 CDK19Q9BWU1 502 aa15.41■□□□□ 0.06
DNMT1-228ENST00000592705 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
DNMT1-228ENST00000592705 SLFN5Q08AF3 891 aa15.4■□□□□ 0.06
DNMT1-228ENST00000592705 AIMP1Q12904 312 aaKnown RBP15.4■□□□□ 0.06
DNMT1-228ENST00000592705 RNF20Q5VTR2 975 aa15.4■□□□□ 0.06
DNMT1-228ENST00000592705 RPRD2Q5VT52 1461 aaKnown RBP15.39■□□□□ 0.05
DNMT1-228ENST00000592705 BECN2A8MW95 431 aa15.39■□□□□ 0.05
DNMT1-228ENST00000592705 NOB1Q9ULX3 412 aaKnown RBP15.39■□□□□ 0.05
DNMT1-228ENST00000592705 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
DNMT1-228ENST00000592705 MVPQ14764 893 aaKnown RBP15.39■□□□□ 0.05
DNMT1-228ENST00000592705 RASSF8Q8NHQ8 419 aa15.39■□□□□ 0.05
DNMT1-228ENST00000592705 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
DNMT1-228ENST00000592705 AMOTL2Q9Y2J4 779 aa15.39■□□□□ 0.05
DNMT1-228ENST00000592705 PRKAR2BP31323 418 aa15.38■□□□□ 0.05
DNMT1-228ENST00000592705 BCL11BQ9C0K0 894 aaPredicted RBP15.38■□□□□ 0.05
DNMT1-228ENST00000592705 ERC2O15083 957 aa15.38■□□□□ 0.05
DNMT1-228ENST00000592705 WDHD1O75717 1129 aaPredicted RBP15.38■□□□□ 0.05
DNMT1-228ENST00000592705 NASPP49321 788 aaPredicted RBP15.38■□□□□ 0.05
DNMT1-228ENST00000592705 RABEP1Q15276 862 aa15.38■□□□□ 0.05
DNMT1-228ENST00000592705 MAPKBP1O60336 1514 aa15.37■□□□□ 0.05
DNMT1-228ENST00000592705 BRPF3Q9ULD4 1205 aa15.37■□□□□ 0.05
DNMT1-228ENST00000592705 CCDC141Q6ZP82 1450 aa15.37■□□□□ 0.05
DNMT1-228ENST00000592705 FOXO3O43524 673 aa15.37■□□□□ 0.05
DNMT1-228ENST00000592705 HSPA2P54652 639 aa15.37■□□□□ 0.05
DNMT1-228ENST00000592705 ZNF530Q6P9A1 599 aaPredicted RBP15.37■□□□□ 0.05
DNMT1-228ENST00000592705 TSR2Q969E8 191 aaKnown RBP15.37■□□□□ 0.05
DNMT1-228ENST00000592705 PHF8Q9UPP1 1060 aa15.36■□□□□ 0.05
DNMT1-228ENST00000592705 G3BP1Q13283 466 aaKnown RBP eCLIP15.36■□□□□ 0.053e-8■□□□□ 9.4
DNMT1-228ENST00000592705 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
DNMT1-228ENST00000592705 ATF7IPQ6VMQ6 1270 aa15.36■□□□□ 0.05
DNMT1-228ENST00000592705 WWC1Q8IX03 1113 aa15.36■□□□□ 0.05
DNMT1-228ENST00000592705 DHX16O60231 1041 aaKnown RBP15.36■□□□□ 0.05
DNMT1-228ENST00000592705 AKAP17AQ02040 695 aaKnown RBP15.36■□□□□ 0.05
DNMT1-228ENST00000592705 CABP1Q9NZU7 370 aa15.36■□□□□ 0.05
DNMT1-228ENST00000592705 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
DNMT1-228ENST00000592705 MCM2P49736 904 aa15.35■□□□□ 0.05
DNMT1-228ENST00000592705 GNAI3P08754 354 aa15.35■□□□□ 0.05
DNMT1-228ENST00000592705 SYNE3Q6ZMZ3 975 aa15.35■□□□□ 0.05
DNMT1-228ENST00000592705 SAMD1Q6SPF0 538 aaPredicted RBP15.35■□□□□ 0.05
DNMT1-228ENST00000592705 KRI1Q8N9T8 703 aaKnown RBP15.35■□□□□ 0.05
DNMT1-228ENST00000592705 ZNF608Q9ULD9 1512 aaPredicted RBP15.35■□□□□ 0.05
DNMT1-228ENST00000592705 UBTFL1P0CB47 393 aaPredicted RBP15.34■□□□□ 0.05
DNMT1-228ENST00000592705 CCDC39Q9UFE4 941 aa15.34■□□□□ 0.05
DNMT1-228ENST00000592705 MBD3O95983 291 aa15.34■□□□□ 0.05
DNMT1-228ENST00000592705 APPP05067 770 aa15.33■□□□□ 0.05
DNMT1-228ENST00000592705 FBXO31Q5XUX0 539 aaPredicted RBP15.33■□□□□ 0.05
DNMT1-228ENST00000592705 EXOC5O00471 708 aa15.33■□□□□ 0.04
DNMT1-228ENST00000592705 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.04
DNMT1-228ENST00000592705 TNRQ92752 1358 aa15.33■□□□□ 0.04
DNMT1-228ENST00000592705 VPS37CA5D8V6 355 aaPredicted RBP15.33■□□□□ 0.04
DNMT1-228ENST00000592705 NBPF14Q5TI25 921 aa15.32■□□□□ 0.04
DNMT1-228ENST00000592705 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.32■□□□□ 0.04
DNMT1-228ENST00000592705 PAXIP1Q6ZW49 1069 aaPredicted RBP15.32■□□□□ 0.04
DNMT1-228ENST00000592705 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
DNMT1-228ENST00000592705 BICD2Q8TD16 824 aa15.32■□□□□ 0.04
DNMT1-228ENST00000592705 CPLX2Q6PUV4 134 aaKnown RBP15.32■□□□□ 0.04
DNMT1-228ENST00000592705 CCDC30Q5VVM6 783 aa15.31■□□□□ 0.04
DNMT1-228ENST00000592705 ZNF428Q96B54 188 aa15.31■□□□□ 0.04
DNMT1-228ENST00000592705 ARHGEF11O15085 1522 aa15.31■□□□□ 0.04
DNMT1-228ENST00000592705 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
DNMT1-228ENST00000592705 IL27Q8NEV9 243 aa15.31■□□□□ 0.04
DNMT1-228ENST00000592705 FANCAO15360 1455 aa15.31■□□□□ 0.04
DNMT1-228ENST00000592705 ZPR1O75312 459 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 LETM1O95202 739 aaPredicted RBP15.3■□□□□ 0.04
DNMT1-228ENST00000592705 CCDC173Q0VFZ6 552 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 CNTROBQ8N137 903 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 C1orf115Q9H7X2 142 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 TPM3P06753 285 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 CHD1LQ86WJ1 897 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
DNMT1-228ENST00000592705 FAM13BQ9NYF5 915 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 CAVIN1Q6NZI2 390 aaKnown RBP15.3■□□□□ 0.04
DNMT1-228ENST00000592705 C8orf37Q96NL8 207 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
DNMT1-228ENST00000592705 NKTRP30414 1462 aaKnown RBP15.3■□□□□ 0.04
DNMT1-228ENST00000592705 K7ELQ4 463 aaPredicted RBP15.3■□□□□ 0.04
DNMT1-228ENST00000592705 CCDC27Q2M243 656 aa15.3■□□□□ 0.04
DNMT1-228ENST00000592705 SASS6Q6UVJ0 657 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 KIF14Q15058 1648 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
DNMT1-228ENST00000592705 STARD3NLO95772 234 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 NEK4P51957 841 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 KRT28Q7Z3Y7 464 aa15.29■□□□□ 0.04
DNMT1-228ENST00000592705 NSD3Q9BZ95 1437 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms