RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 ANKLE1Q8NAG6 615 aa12.31□□□□□ -0.44
VMP1-213ENST00000591877 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
VMP1-213ENST00000591877 S1PR4O95977 384 aa12.3□□□□□ -0.44
VMP1-213ENST00000591877 ST8SIA5O15466 376 aa12.28□□□□□ -0.44
VMP1-213ENST00000591877 GDF9O60383 454 aa12.28□□□□□ -0.44
VMP1-213ENST00000591877 KRI1Q8N9T8 703 aaKnown RBP12.28□□□□□ -0.44
VMP1-213ENST00000591877 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.44
VMP1-213ENST00000591877 CDK13Q14004 1512 aaKnown RBP12.27□□□□□ -0.45
VMP1-213ENST00000591877 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
VMP1-213ENST00000591877 LRRIQ1Q96JM4 1722 aa12.25□□□□□ -0.45
VMP1-213ENST00000591877 ADGRL1O94910 1474 aa12.24□□□□□ -0.45
VMP1-213ENST00000591877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.24□□□□□ -0.45
VMP1-213ENST00000591877 TTC37Q6PGP7 1564 aa12.23□□□□□ -0.45
VMP1-213ENST00000591877 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
VMP1-213ENST00000591877 PLEKHD1A6NEE1 506 aa12.23□□□□□ -0.45
VMP1-213ENST00000591877 TRIM66O15016 1216 aa12.23□□□□□ -0.45
VMP1-213ENST00000591877 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
VMP1-213ENST00000591877 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
VMP1-213ENST00000591877 NEO1Q92859 1461 aa12.22□□□□□ -0.45
VMP1-213ENST00000591877 GPR37O15354 613 aa12.22□□□□□ -0.45
VMP1-213ENST00000591877 LCE2AQ5TA79 106 aaPredicted RBP12.22□□□□□ -0.45
VMP1-213ENST00000591877 FRMPD1Q5SYB0 1578 aa12.22□□□□□ -0.45
VMP1-213ENST00000591877 PHLDB1Q86UU1 1377 aa12.21□□□□□ -0.45
VMP1-213ENST00000591877 DNAJB2P25686 324 aa12.21□□□□□ -0.45
VMP1-213ENST00000591877 PLA2G2CQ5R387 149 aa12.21□□□□□ -0.45
VMP1-213ENST00000591877 KDM4CQ9H3R0 1056 aa12.21□□□□□ -0.45
VMP1-213ENST00000591877 ACTN4O43707 911 aaKnown RBP12.2□□□□□ -0.46
VMP1-213ENST00000591877 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
VMP1-213ENST00000591877 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
VMP1-213ENST00000591877 PDE4DQ08499 809 aa12.19□□□□□ -0.46
VMP1-213ENST00000591877 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
VMP1-213ENST00000591877 MINK1Q8N4C8 1332 aaPredicted RBP12.18□□□□□ -0.46
VMP1-213ENST00000591877 RICTORQ6R327 1708 aa12.18□□□□□ -0.46
VMP1-213ENST00000591877 ADH1BP00325 375 aa12.18□□□□□ -0.46
VMP1-213ENST00000591877 CFHP08603 1231 aa12.18□□□□□ -0.46
VMP1-213ENST00000591877 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
VMP1-213ENST00000591877 FOXC1Q12948 553 aa12.17□□□□□ -0.46
VMP1-213ENST00000591877 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
VMP1-213ENST00000591877 KIF14Q15058 1648 aa12.17□□□□□ -0.46
VMP1-213ENST00000591877 PCF11O94913 1555 aaKnown RBP12.17□□□□□ -0.46
VMP1-213ENST00000591877 FANCAO15360 1455 aa12.16□□□□□ -0.46
VMP1-213ENST00000591877 SLC6A16Q9GZN6 736 aa12.16□□□□□ -0.46
VMP1-213ENST00000591877 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
VMP1-213ENST00000591877 AKNAQ7Z591 1439 aa12.16□□□□□ -0.46
VMP1-213ENST00000591877 CFAP74Q9C0B2 1584 aa12.16□□□□□ -0.46
VMP1-213ENST00000591877 MYO5CQ9NQX4 1742 aa12.14□□□□□ -0.47
VMP1-213ENST00000591877 PLCH2O75038 1416 aa12.14□□□□□ -0.47
VMP1-213ENST00000591877 CASKIN1Q8WXD9 1431 aa12.14□□□□□ -0.47
VMP1-213ENST00000591877 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
VMP1-213ENST00000591877 FAM161AQ3B820 660 aa12.14□□□□□ -0.47
VMP1-213ENST00000591877 HOMEZQ8IX15 550 aa12.14□□□□□ -0.47
VMP1-213ENST00000591877 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
VMP1-213ENST00000591877 PKD2L1Q9P0L9 805 aa12.14□□□□□ -0.47
VMP1-213ENST00000591877 DENND4BO75064 1496 aaPredicted RBP12.14□□□□□ -0.47
VMP1-213ENST00000591877 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
VMP1-213ENST00000591877 NR1I2O75469 434 aa12.13□□□□□ -0.47
VMP1-213ENST00000591877 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
VMP1-213ENST00000591877 SLC10A3P09131 477 aa12.12□□□□□ -0.47
VMP1-213ENST00000591877 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
VMP1-213ENST00000591877 CLIP1P30622 1438 aa12.11□□□□□ -0.47
VMP1-213ENST00000591877 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
VMP1-213ENST00000591877 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
VMP1-213ENST00000591877 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
VMP1-213ENST00000591877 CDC42BPBQ9Y5S2 1711 aa12.11□□□□□ -0.47
VMP1-213ENST00000591877 PTGDRQ13258 359 aa12.1□□□□□ -0.47
VMP1-213ENST00000591877 CDK11AQ9UQ88 783 aaPredicted RBP12.1□□□□□ -0.47
VMP1-213ENST00000591877 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
VMP1-213ENST00000591877 ARHGEF40Q8TER5 1519 aa12.1□□□□□ -0.47
VMP1-213ENST00000591877 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
VMP1-213ENST00000591877 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
VMP1-213ENST00000591877 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
VMP1-213ENST00000591877 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
VMP1-213ENST00000591877 WFS1O76024 890 aa12.09□□□□□ -0.47
VMP1-213ENST00000591877 HIC1Q14526 733 aa12.09□□□□□ -0.47
VMP1-213ENST00000591877 AMHR2Q16671 573 aa12.09□□□□□ -0.47
VMP1-213ENST00000591877 GMPR2Q9P2T1 348 aaKnown RBP12.09□□□□□ -0.47
VMP1-213ENST00000591877 IRF6O14896 467 aa12.08□□□□□ -0.48
VMP1-213ENST00000591877 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
VMP1-213ENST00000591877 SCAPERQ9BY12 1400 aa12.08□□□□□ -0.48
VMP1-213ENST00000591877 GNPATO15228 680 aa12.07□□□□□ -0.48
VMP1-213ENST00000591877 FCHSD2O94868 740 aa12.07□□□□□ -0.48
VMP1-213ENST00000591877 PUS10Q3MIT2 529 aaKnown RBP12.07□□□□□ -0.48
VMP1-213ENST00000591877 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
VMP1-213ENST00000591877 DDRGK1Q96HY6 314 aa12.07□□□□□ -0.48
VMP1-213ENST00000591877 YEATS2Q9ULM3 1422 aa12.07□□□□□ -0.48
VMP1-213ENST00000591877 CDC42BPAQ5VT25 1732 aa12.06□□□□□ -0.48
VMP1-213ENST00000591877 POGZQ7Z3K3 1410 aa12.06□□□□□ -0.48
VMP1-213ENST00000591877 EFCAB2Q5VUJ9 269 aa12.06□□□□□ -0.48
VMP1-213ENST00000591877 PREX2Q70Z35 1606 aa12.06□□□□□ -0.48
VMP1-213ENST00000591877 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
VMP1-213ENST00000591877 MADDQ8WXG6 1647 aa12.05□□□□□ -0.48
VMP1-213ENST00000591877 C11orf95C9JLR9 678 aaPredicted RBP12.05□□□□□ -0.48
VMP1-213ENST00000591877 CRIPAKQ8N1N5 446 aa12.05□□□□□ -0.48
VMP1-213ENST00000591877 ARHGAP5Q13017 1502 aa12.05□□□□□ -0.48
VMP1-213ENST00000591877 HECW2Q9P2P5 1572 aa12.05□□□□□ -0.48
VMP1-213ENST00000591877 MAGI2Q86UL8 1455 aa12.04□□□□□ -0.48
VMP1-213ENST00000591877 AXIN1O15169 862 aa12.04□□□□□ -0.48
VMP1-213ENST00000591877 SPSB2Q99619 263 aa12.04□□□□□ -0.48
VMP1-213ENST00000591877 PTPRMP28827 1452 aa12.03□□□□□ -0.48
VMP1-213ENST00000591877 TOR4AQ9NXH8 423 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms