RNA–Protein interactions for RNA: ENST00000589553.5

TMC6-212, Transcript of transmembrane channel like 6, humanhuman

TSL 2 BASIC

Gene TMC6, Length 2,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-212ENST00000589553 HDGFL2Q7Z4V5 671 aaPredicted RBP26.93■■□□□ 1.9
TMC6-212ENST00000589553 MAPK8IP3Q9UPT6 1336 aa26.91■■□□□ 1.9
TMC6-212ENST00000589553 VIRMAQ69YN4 1812 aaKnown RBP26.91■■□□□ 1.9
TMC6-212ENST00000589553 WAPLQ7Z5K2 1190 aa26.91■■□□□ 1.9
TMC6-212ENST00000589553 PPM1GO15355 546 aaPredicted RBP26.91■■□□□ 1.9
TMC6-212ENST00000589553 EXOSC9Q06265 439 aaKnown RBP26.9■■□□□ 1.9
TMC6-212ENST00000589553 A2ML1A8K2U0 1454 aa26.89■■□□□ 1.9
TMC6-212ENST00000589553 PMFBP1Q8TBY8 1022 aa26.89■■□□□ 1.9
TMC6-212ENST00000589553 KIF20BQ96Q89 1820 aa26.89■■□□□ 1.89
TMC6-212ENST00000589553 FBLN1P23142 703 aa26.89■■□□□ 1.89
TMC6-212ENST00000589553 MLECQ14165 292 aa26.88■■□□□ 1.89
TMC6-212ENST00000589553 DIAPH1O60610 1272 aaKnown RBP26.87■■□□□ 1.89
TMC6-212ENST00000589553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.87■■□□□ 1.89
TMC6-212ENST00000589553 MVPQ14764 893 aaKnown RBP26.86■■□□□ 1.89
TMC6-212ENST00000589553 ZKSCAN2Q63HK3 967 aa26.86■■□□□ 1.89
TMC6-212ENST00000589553 SEC24BO95487 1268 aa26.86■■□□□ 1.89
TMC6-212ENST00000589553 DAXXQ9UER7 740 aaPredicted RBP26.86■■□□□ 1.89
TMC6-212ENST00000589553 AAMPQ13685 434 aa26.85■■□□□ 1.89
TMC6-212ENST00000589553 SMC4Q9NTJ3 1288 aa26.85■■□□□ 1.89
TMC6-212ENST00000589553 USP19O94966 1318 aa26.85■■□□□ 1.89
TMC6-212ENST00000589553 PNPLA6Q8IY17 1366 aa26.85■■□□□ 1.89
TMC6-212ENST00000589553 RIMS2Q9UQ26 1411 aa26.85■■□□□ 1.89
TMC6-212ENST00000589553 RIPK4P57078 832 aa26.85■■□□□ 1.89
TMC6-212ENST00000589553 AGLP35573 1532 aa26.84■■□□□ 1.89
TMC6-212ENST00000589553 REREQ9P2R6 1566 aa26.84■■□□□ 1.89
TMC6-212ENST00000589553 RIMBP3CA6NJZ7 1639 aa26.84■■□□□ 1.89
TMC6-212ENST00000589553 RIMBP3BA6NNM3 1639 aa26.84■■□□□ 1.89
TMC6-212ENST00000589553 RIMBP3Q9UFD9 1639 aa26.84■■□□□ 1.89
TMC6-212ENST00000589553 SETD1AO15047 1707 aaKnown RBP26.84■■□□□ 1.89
TMC6-212ENST00000589553 FTSJ3Q8IY81 847 aaKnown RBP26.84■■□□□ 1.89
TMC6-212ENST00000589553 SPATA31D1Q6ZQQ2 1576 aa26.84■■□□□ 1.89
TMC6-212ENST00000589553 DZIP1LQ8IYY4 767 aaKnown RBP26.83■■□□□ 1.89
TMC6-212ENST00000589553 USP35Q9P2H5 1018 aa26.83■■□□□ 1.89
TMC6-212ENST00000589553 PDZRN3Q9UPQ7 1066 aa26.83■■□□□ 1.89
TMC6-212ENST00000589553 SSH1Q8WYL5 1049 aa26.83■■□□□ 1.88
TMC6-212ENST00000589553 CT47B1P0C2W7 299 aaPredicted RBP26.82■■□□□ 1.88
TMC6-212ENST00000589553 DLC1Q96QB1 1528 aa26.81■■□□□ 1.88
TMC6-212ENST00000589553 TRIM27P14373 513 aa26.8■■□□□ 1.88
TMC6-212ENST00000589553 LRRC7Q96NW7 1537 aa26.8■■□□□ 1.88
TMC6-212ENST00000589553 RWDD1Q9H446 243 aaPredicted RBP26.79■■□□□ 1.88
TMC6-212ENST00000589553 POLKQ9UBT6 870 aa26.79■■□□□ 1.88
TMC6-212ENST00000589553 PPP6R1Q9UPN7 881 aa26.78■■□□□ 1.88
TMC6-212ENST00000589553 ATP7BP35670 1465 aa26.78■■□□□ 1.88
TMC6-212ENST00000589553 IL16Q14005 1332 aa26.77■■□□□ 1.88
TMC6-212ENST00000589553 CDC42BPGQ6DT37 1551 aa26.76■■□□□ 1.87
TMC6-212ENST00000589553 PRKAR2BP31323 418 aa26.76■■□□□ 1.87
TMC6-212ENST00000589553 NFKBIBQ15653 356 aa26.76■■□□□ 1.87
TMC6-212ENST00000589553 NRXN3Q9Y4C0 1643 aa26.75■■□□□ 1.87
TMC6-212ENST00000589553 RSPH6AQ9H0K4 717 aa26.75■■□□□ 1.87
TMC6-212ENST00000589553 NOB1Q9ULX3 412 aaKnown RBP26.75■■□□□ 1.87
TMC6-212ENST00000589553 ATF7IPQ6VMQ6 1270 aa26.74■■□□□ 1.87
TMC6-212ENST00000589553 ITPRIPQ8IWB1 547 aa26.74■■□□□ 1.87
TMC6-212ENST00000589553 METP08581 1390 aa26.74■■□□□ 1.87
TMC6-212ENST00000589553 FCHSD2O94868 740 aa26.73■■□□□ 1.87
TMC6-212ENST00000589553 FAM135BQ49AJ0 1406 aa26.73■■□□□ 1.87
TMC6-212ENST00000589553 PNNQ9H307 717 aaKnown RBP26.72■■□□□ 1.87
TMC6-212ENST00000589553 MAP2P11137 1827 aaKnown RBP26.72■■□□□ 1.87
TMC6-212ENST00000589553 HMOX1P09601 288 aa26.72■■□□□ 1.87
TMC6-212ENST00000589553 ZRANB1Q9UGI0 708 aa26.72■■□□□ 1.87
TMC6-212ENST00000589553 EMILIN1Q9Y6C2 1016 aa26.72■■□□□ 1.87
TMC6-212ENST00000589553 TXNDC2Q86VQ3 553 aa26.71■■□□□ 1.87
TMC6-212ENST00000589553 NME9Q86XW9 330 aa26.71■■□□□ 1.87
TMC6-212ENST00000589553 NCKAP5LQ9HCH0 1330 aa26.71■■□□□ 1.87
TMC6-212ENST00000589553 PPIP5K1Q6PFW1 1433 aa26.71■■□□□ 1.87
TMC6-212ENST00000589553 WASLO00401 505 aaPredicted RBP26.7■■□□□ 1.87
TMC6-212ENST00000589553 PHACTR3Q96KR7 559 aa26.7■■□□□ 1.86
TMC6-212ENST00000589553 CPSF1Q10570 1443 aaKnown RBP26.69■■□□□ 1.86
TMC6-212ENST00000589553 TMEM57Q8N5G2 664 aa26.69■■□□□ 1.86
TMC6-212ENST00000589553 DDX19BQ9UMR2 479 aa26.69■■□□□ 1.86
TMC6-212ENST00000589553 THUMPD2Q9BTF0 503 aaKnown RBP26.68■■□□□ 1.86
TMC6-212ENST00000589553 EDC4Q6P2E9 1401 aaKnown RBP26.67■■□□□ 1.86
TMC6-212ENST00000589553 ZMYM3Q14202 1370 aa26.67■■□□□ 1.86
TMC6-212ENST00000589553 KIF16BQ96L93 1317 aa26.65■■□□□ 1.86
TMC6-212ENST00000589553 NUDT16Q96DE0 195 aaKnown RBP26.64■■□□□ 1.85
TMC6-212ENST00000589553 IL13P35225 146 aa26.63■■□□□ 1.85
TMC6-212ENST00000589553 HDAC1Q13547 482 aaPredicted RBP26.63■■□□□ 1.85
TMC6-212ENST00000589553 NFE2L2Q16236 605 aa26.63■■□□□ 1.85
TMC6-212ENST00000589553 CPS1P31327 1500 aa26.63■■□□□ 1.85
TMC6-212ENST00000589553 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.62■■□□□ 1.85
TMC6-212ENST00000589553 ZBTB40Q9NUA8 1239 aa26.62■■□□□ 1.85
TMC6-212ENST00000589553 RRS1Q15050 365 aaKnown RBP26.61■■□□□ 1.85
TMC6-212ENST00000589553 ALDH1L2Q3SY69 923 aa26.61■■□□□ 1.85
TMC6-212ENST00000589553 CDK12Q9NYV4 1490 aaPredicted RBP26.6■■□□□ 1.85
TMC6-212ENST00000589553 IPO8O15397 1037 aaKnown RBP26.6■■□□□ 1.85
TMC6-212ENST00000589553 FRAT2O75474 233 aaPredicted RBP26.6■■□□□ 1.85
TMC6-212ENST00000589553 TBC1D32Q96NH3 1257 aa26.6■■□□□ 1.85
TMC6-212ENST00000589553 ESF1Q9H501 851 aaKnown RBP26.6■■□□□ 1.85
TMC6-212ENST00000589553 UPF2Q9HAU5 1272 aaKnown RBP26.58■■□□□ 1.85
TMC6-212ENST00000589553 TSPYL6Q8N831 410 aa26.57■■□□□ 1.84
TMC6-212ENST00000589553 CCDC61Q9Y6R9 512 aa26.57■■□□□ 1.84
TMC6-212ENST00000589553 MON2Q7Z3U7 1717 aa26.57■■□□□ 1.84
TMC6-212ENST00000589553 COG3Q96JB2 828 aa26.57■■□□□ 1.84
TMC6-212ENST00000589553 KNDC1Q76NI1 1749 aa26.57■■□□□ 1.84
TMC6-212ENST00000589553 SMC5Q8IY18 1101 aa26.56■■□□□ 1.84
TMC6-212ENST00000589553 PRR36Q9H6K5 1346 aa26.56■■□□□ 1.84
TMC6-212ENST00000589553 AATKQ6ZMQ8 1374 aa26.56■■□□□ 1.84
TMC6-212ENST00000589553 TECPR2O15040 1411 aa26.55■■□□□ 1.84
TMC6-212ENST00000589553 VAMP4O75379 141 aa26.55■■□□□ 1.84
TMC6-212ENST00000589553 BECN1Q14457 450 aa26.55■■□□□ 1.84
TMC6-212ENST00000589553 ELL2O00472 640 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms