RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 BECN1Q14457 450 aa23.46■■□□□ 1.35
CACTIN-204ENST00000585942 TBC1D32Q96NH3 1257 aa23.46■■□□□ 1.35
CACTIN-204ENST00000585942 ITPRIPQ8IWB1 547 aa23.45■■□□□ 1.34
CACTIN-204ENST00000585942 POGKQ9P215 609 aa23.45■■□□□ 1.34
CACTIN-204ENST00000585942 PIK3C2BO00750 1634 aa23.45■■□□□ 1.34
CACTIN-204ENST00000585942 RIPK4P57078 832 aa23.45■■□□□ 1.34
CACTIN-204ENST00000585942 NOB1Q9ULX3 412 aaKnown RBP23.45■■□□□ 1.34
CACTIN-204ENST00000585942 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
CACTIN-204ENST00000585942 ADGRB2O60241 1585 aa23.44■■□□□ 1.34
CACTIN-204ENST00000585942 UPF2Q9HAU5 1272 aaKnown RBP23.44■■□□□ 1.34
CACTIN-204ENST00000585942 FBXO31Q5XUX0 539 aaPredicted RBP23.43■■□□□ 1.34
CACTIN-204ENST00000585942 SPRYD3Q8NCJ5 442 aa23.43■■□□□ 1.34
CACTIN-204ENST00000585942 NCBP3Q53F19 620 aaKnown RBP23.42■■□□□ 1.34
CACTIN-204ENST00000585942 GLIPR1L2Q4G1C9 344 aa23.42■■□□□ 1.34
CACTIN-204ENST00000585942 TBC1D2Q9BYX2 928 aa23.42■■□□□ 1.34
CACTIN-204ENST00000585942 CFAP74Q9C0B2 1584 aa23.42■■□□□ 1.34
CACTIN-204ENST00000585942 SLC52A1Q9NWF4 448 aa23.41■■□□□ 1.34
CACTIN-204ENST00000585942 TERF2IPQ9NYB0 399 aa23.41■■□□□ 1.34
CACTIN-204ENST00000585942 ATF7IPQ6VMQ6 1270 aa23.41■■□□□ 1.34
CACTIN-204ENST00000585942 CABP1Q9NZU7 370 aa23.41■■□□□ 1.34
CACTIN-204ENST00000585942 YEATS2Q9ULM3 1422 aa23.4■■□□□ 1.34
CACTIN-204ENST00000585942 TMEM57Q8N5G2 664 aa23.4■■□□□ 1.34
CACTIN-204ENST00000585942 COL3A1P02461 1466 aaPredicted RBP23.4■■□□□ 1.34
CACTIN-204ENST00000585942 DIAPH1O60610 1272 aaKnown RBP23.39■■□□□ 1.34
CACTIN-204ENST00000585942 ANTXR1Q9H6X2 564 aa23.39■■□□□ 1.34
CACTIN-204ENST00000585942 CD163L1Q9NR16 1453 aa23.39■■□□□ 1.33
CACTIN-204ENST00000585942 CT47B1P0C2W7 299 aaPredicted RBP23.39■■□□□ 1.33
CACTIN-204ENST00000585942 CDK19Q9BWU1 502 aa23.39■■□□□ 1.33
CACTIN-204ENST00000585942 MYO5BQ9ULV0 1848 aa23.39■■□□□ 1.33
CACTIN-204ENST00000585942 DIP2CQ9Y2E4 1556 aa23.38■■□□□ 1.33
CACTIN-204ENST00000585942 PTPRMP28827 1452 aa23.38■■□□□ 1.33
CACTIN-204ENST00000585942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.38■■□□□ 1.33
CACTIN-204ENST00000585942 MFAP1P55081 439 aaKnown RBP23.37■■□□□ 1.33
CACTIN-204ENST00000585942 VSIG10Q8N0Z9 540 aa23.37■■□□□ 1.33
CACTIN-204ENST00000585942 DDX19BQ9UMR2 479 aa23.37■■□□□ 1.33
CACTIN-204ENST00000585942 ATAD2Q6PL18 1390 aa23.36■■□□□ 1.33
CACTIN-204ENST00000585942 ARHGAP31Q2M1Z3 1444 aa23.35■■□□□ 1.33
CACTIN-204ENST00000585942 ZMYND15Q9H091 742 aa23.35■■□□□ 1.33
CACTIN-204ENST00000585942 YTHDC2Q9H6S0 1430 aaKnown RBP23.35■■□□□ 1.33
CACTIN-204ENST00000585942 ZFYVE9O95405 1425 aa23.34■■□□□ 1.33
CACTIN-204ENST00000585942 HDAC1Q13547 482 aaPredicted RBP23.34■■□□□ 1.33
CACTIN-204ENST00000585942 RRAGDQ9NQL2 400 aaPredicted RBP23.34■■□□□ 1.33
CACTIN-204ENST00000585942 HDGFL2Q7Z4V5 671 aaPredicted RBP23.33■■□□□ 1.33
CACTIN-204ENST00000585942 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.33
CACTIN-204ENST00000585942 ZBTB40Q9NUA8 1239 aa23.33■■□□□ 1.33
CACTIN-204ENST00000585942 ZMYM3Q14202 1370 aa23.33■■□□□ 1.32
CACTIN-204ENST00000585942 NEO1Q92859 1461 aa23.33■■□□□ 1.32
CACTIN-204ENST00000585942 THUMPD2Q9BTF0 503 aaKnown RBP23.32■■□□□ 1.32
CACTIN-204ENST00000585942 C22orf23Q9BZE7 217 aa23.32■■□□□ 1.32
CACTIN-204ENST00000585942 PRKAR2BP31323 418 aa23.32■■□□□ 1.32
CACTIN-204ENST00000585942 HMOX1P09601 288 aa23.31■■□□□ 1.32
CACTIN-204ENST00000585942 IL16Q14005 1332 aa23.31■■□□□ 1.32
CACTIN-204ENST00000585942 STAG3Q9UJ98 1225 aa23.31■■□□□ 1.32
CACTIN-204ENST00000585942 PHACTR3Q96KR7 559 aa23.3■■□□□ 1.32
CACTIN-204ENST00000585942 SMC5Q8IY18 1101 aa23.3■■□□□ 1.32
CACTIN-204ENST00000585942 TMEM131LA2VDJ0 1609 aa23.29■■□□□ 1.32
CACTIN-204ENST00000585942 PNPLA6Q8IY17 1366 aa23.29■■□□□ 1.32
CACTIN-204ENST00000585942 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
CACTIN-204ENST00000585942 LNPKQ9C0E8 428 aa23.28■■□□□ 1.32
CACTIN-204ENST00000585942 ELL2O00472 640 aaPredicted RBP23.27■■□□□ 1.32
CACTIN-204ENST00000585942 FCHSD2O94868 740 aa23.27■■□□□ 1.32
CACTIN-204ENST00000585942 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
CACTIN-204ENST00000585942 KIF16BQ96L93 1317 aa23.26■■□□□ 1.31
CACTIN-204ENST00000585942 MED14O60244 1454 aa23.24■■□□□ 1.31
CACTIN-204ENST00000585942 TSPYL6Q8N831 410 aa23.24■■□□□ 1.31
CACTIN-204ENST00000585942 PREX1Q8TCU6 1659 aa23.24■■□□□ 1.31
CACTIN-204ENST00000585942 ARHGEF40Q8TER5 1519 aa23.24■■□□□ 1.31
CACTIN-204ENST00000585942 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
CACTIN-204ENST00000585942 C1orf115Q9H7X2 142 aa23.24■■□□□ 1.31
CACTIN-204ENST00000585942 EMILIN1Q9Y6C2 1016 aa23.24■■□□□ 1.31
CACTIN-204ENST00000585942 RICTORQ6R327 1708 aa23.24■■□□□ 1.31
CACTIN-204ENST00000585942 ZRANB1Q9UGI0 708 aa23.23■■□□□ 1.31
CACTIN-204ENST00000585942 ALKQ9UM73 1620 aa23.23■■□□□ 1.31
CACTIN-204ENST00000585942 ARXQ96QS3 562 aa23.23■■□□□ 1.31
CACTIN-204ENST00000585942 LRRC7Q96NW7 1537 aa23.22■■□□□ 1.31
CACTIN-204ENST00000585942 NUCB1Q02818 461 aa23.22■■□□□ 1.31
CACTIN-204ENST00000585942 ALDH1L2Q3SY69 923 aa23.22■■□□□ 1.31
CACTIN-204ENST00000585942 ANKRD26Q9UPS8 1709 aa23.21■■□□□ 1.31
CACTIN-204ENST00000585942 NAP1L5Q96NT1 182 aaPredicted RBP23.2■■□□□ 1.3
CACTIN-204ENST00000585942 VAMP4O75379 141 aa23.19■■□□□ 1.3
CACTIN-204ENST00000585942 CHD1LQ86WJ1 897 aa23.19■■□□□ 1.3
CACTIN-204ENST00000585942 NME9Q86XW9 330 aa23.19■■□□□ 1.3
CACTIN-204ENST00000585942 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
CACTIN-204ENST00000585942 CLTCQ00610 1675 aaKnown RBP23.19■■□□□ 1.3
CACTIN-204ENST00000585942 ZBTB7BO15156 539 aaPredicted RBP23.18■■□□□ 1.3
CACTIN-204ENST00000585942 HSP90AA2PQ14568 343 aaPredicted RBP23.18■■□□□ 1.3
CACTIN-204ENST00000585942 NFE2L2Q16236 605 aa23.18■■□□□ 1.3
CACTIN-204ENST00000585942 FAM135BQ49AJ0 1406 aa23.18■■□□□ 1.3
CACTIN-204ENST00000585942 GZF1Q9H116 711 aaPredicted RBP23.18■■□□□ 1.3
CACTIN-204ENST00000585942 ANKRD45Q5TZF3 282 aa23.17■■□□□ 1.3
CACTIN-204ENST00000585942 MRPL50Q8N5N7 158 aaKnown RBP23.16■■□□□ 1.3
CACTIN-204ENST00000585942 MCM4P33991 863 aa23.16■■□□□ 1.3
CACTIN-204ENST00000585942 MBIPQ9NS73 344 aa23.15■■□□□ 1.3
CACTIN-204ENST00000585942 FAM83GA6ND36 823 aa23.14■■□□□ 1.3
CACTIN-204ENST00000585942 MLECQ14165 292 aa23.14■■□□□ 1.3
CACTIN-204ENST00000585942 RRS1Q15050 365 aaKnown RBP23.14■■□□□ 1.3
CACTIN-204ENST00000585942 KIF20BQ96Q89 1820 aa23.14■■□□□ 1.29
CACTIN-204ENST00000585942 MAP2P11137 1827 aaKnown RBP23.14■■□□□ 1.29
CACTIN-204ENST00000585942 IL13P35225 146 aa23.14■■□□□ 1.29
CACTIN-204ENST00000585942 PPIP5K1Q6PFW1 1433 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms