RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MYO5BQ9ULV0 1848 aa14.93□□□□□ -0.02
CDK5RAP3-231ENST00000584063 ERVK-7P63135 1459 aa14.93□□□□□ -0.02
CDK5RAP3-231ENST00000584063 PIK3C2GO75747 1445 aa14.92□□□□□ -0.02
CDK5RAP3-231ENST00000584063 BCAR3O75815 825 aa14.92□□□□□ -0.02
CDK5RAP3-231ENST00000584063 RRP7AQ9Y3A4 280 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-231ENST00000584063 MYOM2P54296 1465 aa14.92□□□□□ -0.02
CDK5RAP3-231ENST00000584063 ASXL1Q8IXJ9 1541 aa14.92□□□□□ -0.02
CDK5RAP3-231ENST00000584063 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
CDK5RAP3-231ENST00000584063 PREX1Q8TCU6 1659 aa14.91□□□□□ -0.02
CDK5RAP3-231ENST00000584063 GOLGA2Q08379 1002 aa14.9□□□□□ -0.02
CDK5RAP3-231ENST00000584063 ZNF521Q96K83 1311 aa14.9□□□□□ -0.02
CDK5RAP3-231ENST00000584063 AGLP35573 1532 aa14.89□□□□□ -0.03
CDK5RAP3-231ENST00000584063 ZC3H13Q5T200 1668 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-231ENST00000584063 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-231ENST00000584063 SLFN5Q08AF3 891 aa14.87□□□□□ -0.03
CDK5RAP3-231ENST00000584063 TXNDC2Q86VQ3 553 aa14.87□□□□□ -0.03
CDK5RAP3-231ENST00000584063 SLC26A8Q96RN1 970 aa14.86□□□□□ -0.03
CDK5RAP3-231ENST00000584063 PIK3C2BO00750 1634 aa14.86□□□□□ -0.03
CDK5RAP3-231ENST00000584063 MS4A1P11836 297 aa14.86□□□□□ -0.03
CDK5RAP3-231ENST00000584063 EVC2Q86UK5 1308 aa14.86□□□□□ -0.03
CDK5RAP3-231ENST00000584063 NUTM2FA1L443 756 aa14.85□□□□□ -0.03
CDK5RAP3-231ENST00000584063 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
CDK5RAP3-231ENST00000584063 REREQ9P2R6 1566 aa14.85□□□□□ -0.03
CDK5RAP3-231ENST00000584063 TNRQ92752 1358 aa14.85□□□□□ -0.03
CDK5RAP3-231ENST00000584063 PATL2C9JE40 543 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-231ENST00000584063 NFKBIBQ15653 356 aa14.85□□□□□ -0.03
CDK5RAP3-231ENST00000584063 NRXN1Q9ULB1 1477 aa14.84□□□□□ -0.03
CDK5RAP3-231ENST00000584063 FRAT1Q92837 279 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-231ENST00000584063 NEXMIFQ5QGS0 1516 aa14.84□□□□□ -0.03
CDK5RAP3-231ENST00000584063 NSD3Q9BZ95 1437 aa14.84□□□□□ -0.03
CDK5RAP3-231ENST00000584063 RIMS2Q9UQ26 1411 aa14.84□□□□□ -0.03
CDK5RAP3-231ENST00000584063 BCL2L13Q9BXK5 485 aa14.84□□□□□ -0.03
CDK5RAP3-231ENST00000584063 PPLO60437 1756 aa14.84□□□□□ -0.03
CDK5RAP3-231ENST00000584063 KDM5AP29375 1690 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-231ENST00000584063 TNNQ9UQP3 1299 aa14.83□□□□□ -0.04
CDK5RAP3-231ENST00000584063 IFT172Q9UG01 1749 aa14.83□□□□□ -0.04
CDK5RAP3-231ENST00000584063 C1orf115Q9H7X2 142 aa14.82□□□□□ -0.04
CDK5RAP3-231ENST00000584063 MORC1Q86VD1 984 aa14.82□□□□□ -0.04
CDK5RAP3-231ENST00000584063 PANK1Q8TE04 598 aa14.82□□□□□ -0.04
CDK5RAP3-231ENST00000584063 HDGFP51858 240 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 C8orf34Q49A92 452 aa14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 GRIPAP1Q4V328 841 aa14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 KDM2BQ8NHM5 1336 aa14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 TMEM131LA2VDJ0 1609 aa14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 FRAT2O75474 233 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 IGHDP01880 384 aa14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 COG6Q9Y2V7 657 aa14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 A2ML1A8K2U0 1454 aa14.81□□□□□ -0.04
CDK5RAP3-231ENST00000584063 LTKP29376 864 aa14.8□□□□□ -0.04
CDK5RAP3-231ENST00000584063 OS9Q13438 667 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-231ENST00000584063 CDK19Q9BWU1 502 aa14.8□□□□□ -0.04
CDK5RAP3-231ENST00000584063 PPM1GO15355 546 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-231ENST00000584063 FAM177A1Q8N128 213 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-231ENST00000584063 ADGRB1O14514 1584 aa14.8□□□□□ -0.04
CDK5RAP3-231ENST00000584063 FOXD4L5Q5VV16 416 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 FOXD4L4Q8WXT5 416 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 INSRP06213 1382 aa14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 NEURL4Q96JN8 1562 aa14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 CENPQQ7L2Z9 268 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 YTHDC2Q9H6S0 1430 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 SEC24BO95487 1268 aa14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 TRMT2AQ8IZ69 625 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 CLUAP1Q96AJ1 413 aa14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 CABP1Q9NZU7 370 aa14.79□□□□□ -0.04
CDK5RAP3-231ENST00000584063 FAM161AQ3B820 660 aa14.78□□□□□ -0.04
CDK5RAP3-231ENST00000584063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDK5RAP3-231ENST00000584063 EID1Q9Y6B2 187 aa14.78□□□□□ -0.04
CDK5RAP3-231ENST00000584063 MTHFSP49914 203 aa14.78□□□□□ -0.04
CDK5RAP3-231ENST00000584063 FAM193AP78312 1265 aa14.78□□□□□ -0.04
CDK5RAP3-231ENST00000584063 SPRYD3Q8NCJ5 442 aa14.77□□□□□ -0.04
CDK5RAP3-231ENST00000584063 DDRGK1Q96HY6 314 aa14.77□□□□□ -0.04
CDK5RAP3-231ENST00000584063 GGNBP2Q9H3C7 697 aa14.77□□□□□ -0.04
CDK5RAP3-231ENST00000584063 METP08581 1390 aa14.77□□□□□ -0.04
CDK5RAP3-231ENST00000584063 RBM25P49756 843 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-231ENST00000584063 SLKQ9H2G2 1235 aaPredicted RBP14.77□□□□□ -0.05
CDK5RAP3-231ENST00000584063 NCKAP5LQ9HCH0 1330 aa14.77□□□□□ -0.05
CDK5RAP3-231ENST00000584063 USP35Q9P2H5 1018 aa14.76□□□□□ -0.05
CDK5RAP3-231ENST00000584063 SPATA31D1Q6ZQQ2 1576 aa14.76□□□□□ -0.05
CDK5RAP3-231ENST00000584063 NPC1L1Q9UHC9 1359 aa14.76□□□□□ -0.05
CDK5RAP3-231ENST00000584063 PTMSP20962 102 aa14.76□□□□□ -0.05
CDK5RAP3-231ENST00000584063 KIAA1210Q9ULL0 1709 aa14.76□□□□□ -0.05
CDK5RAP3-231ENST00000584063 GSE1Q14687 1217 aa14.75□□□□□ -0.05
CDK5RAP3-231ENST00000584063 TCP11L2Q8N4U5 519 aa14.75□□□□□ -0.05
CDK5RAP3-231ENST00000584063 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-231ENST00000584063 ZFYVE9O95405 1425 aa14.74□□□□□ -0.05
CDK5RAP3-231ENST00000584063 NKTRP30414 1462 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-231ENST00000584063 FER1L4A9Z1Z3 1794 aa14.74□□□□□ -0.05
CDK5RAP3-231ENST00000584063 RAD21O60216 631 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 KDM4AO75164 1064 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 FBLN1P23142 703 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 RBM33Q96EV2 1170 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 SBNO2Q9Y2G9 1366 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 CGNL1Q0VF96 1302 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 E9PSI1 815 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 SETBP1Q9Y6X0 1596 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 MTMR7Q9Y216 660 aa14.73□□□□□ -0.05
CDK5RAP3-231ENST00000584063 ALKQ9UM73 1620 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms