RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 ROBO1Q9Y6N7 1651 aa22.8■■□□□ 1.24
CDK5RAP3-230ENST00000584042 TTC21BQ7Z4L5 1316 aa22.8■■□□□ 1.24
CDK5RAP3-230ENST00000584042 SLAIN2Q9P270 581 aa22.79■■□□□ 1.24
CDK5RAP3-230ENST00000584042 PXDNQ92626 1479 aa22.79■■□□□ 1.24
CDK5RAP3-230ENST00000584042 ALS2Q96Q42 1657 aa22.78■■□□□ 1.24
CDK5RAP3-230ENST00000584042 OVOS2A0A0J9YW53 1432 aa22.78■■□□□ 1.24
CDK5RAP3-230ENST00000584042 CC2D1BQ5T0F9 858 aaKnown RBP22.78■■□□□ 1.24
CDK5RAP3-230ENST00000584042 OVOS2Q6IE36 1432 aa22.78■■□□□ 1.24
CDK5RAP3-230ENST00000584042 BRINP3Q76B58 766 aa22.78■■□□□ 1.24
CDK5RAP3-230ENST00000584042 MARF1Q9Y4F3 1742 aaKnown RBP22.78■■□□□ 1.24
CDK5RAP3-230ENST00000584042 NPHP3Q7Z494 1330 aa22.78■■□□□ 1.24
CDK5RAP3-230ENST00000584042 AHDC1Q5TGY3 1603 aaPredicted RBP22.77■■□□□ 1.24
CDK5RAP3-230ENST00000584042 MIER1Q8N108 512 aa22.76■■□□□ 1.23
CDK5RAP3-230ENST00000584042 USP31Q70CQ4 1352 aa22.75■■□□□ 1.23
CDK5RAP3-230ENST00000584042 FYB1O15117 783 aa22.74■■□□□ 1.23
CDK5RAP3-230ENST00000584042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.74■■□□□ 1.23
CDK5RAP3-230ENST00000584042 MYBBP1AQ9BQG0 1328 aaKnown RBP22.74■■□□□ 1.23
CDK5RAP3-230ENST00000584042 SBNO1A3KN83 1393 aa22.74■■□□□ 1.23
CDK5RAP3-230ENST00000584042 FOXO3O43524 673 aa22.73■■□□□ 1.23
CDK5RAP3-230ENST00000584042 PSME1Q06323 249 aa22.72■■□□□ 1.23
CDK5RAP3-230ENST00000584042 TNS3Q68CZ2 1445 aa22.72■■□□□ 1.23
CDK5RAP3-230ENST00000584042 CCER2I3L3R5 266 aa22.71■■□□□ 1.23
CDK5RAP3-230ENST00000584042 NME9Q86XW9 330 aa22.71■■□□□ 1.23
CDK5RAP3-230ENST00000584042 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
CDK5RAP3-230ENST00000584042 MED1Q15648 1581 aaPredicted RBP22.71■■□□□ 1.23
CDK5RAP3-230ENST00000584042 CERKQ8TCT0 537 aa22.7■■□□□ 1.22
CDK5RAP3-230ENST00000584042 GGNBP2Q9H3C7 697 aa22.7■■□□□ 1.22
CDK5RAP3-230ENST00000584042 TOM1O60784 492 aa22.69■■□□□ 1.22
CDK5RAP3-230ENST00000584042 MORC1Q86VD1 984 aa22.69■■□□□ 1.22
CDK5RAP3-230ENST00000584042 SOS2Q07890 1332 aaPredicted RBP22.68■■□□□ 1.22
CDK5RAP3-230ENST00000584042 CNGB1Q14028 1251 aaPredicted RBP22.68■■□□□ 1.22
CDK5RAP3-230ENST00000584042 KRT28Q7Z3Y7 464 aa22.68■■□□□ 1.22
CDK5RAP3-230ENST00000584042 SLIT3O75094 1523 aa22.67■■□□□ 1.22
CDK5RAP3-230ENST00000584042 COG3Q96JB2 828 aa22.67■■□□□ 1.22
CDK5RAP3-230ENST00000584042 CRYBG1Q9Y4K1 1723 aa22.67■■□□□ 1.22
CDK5RAP3-230ENST00000584042 SMG6Q86US8 1419 aaKnown RBP22.66■■□□□ 1.22
CDK5RAP3-230ENST00000584042 NLRP13Q86W25 1043 aa22.66■■□□□ 1.22
CDK5RAP3-230ENST00000584042 AATKQ6ZMQ8 1374 aa22.65■■□□□ 1.22
CDK5RAP3-230ENST00000584042 PHRF1Q9P1Y6 1649 aaKnown RBP22.65■■□□□ 1.22
CDK5RAP3-230ENST00000584042 ARHGEF10O15013 1369 aa22.64■■□□□ 1.22
CDK5RAP3-230ENST00000584042 COL16A1Q07092 1604 aaPredicted RBP22.64■■□□□ 1.22
CDK5RAP3-230ENST00000584042 PAK3O75914 559 aaPredicted RBP22.64■■□□□ 1.21
CDK5RAP3-230ENST00000584042 PPP2R1AP30153 589 aa22.64■■□□□ 1.21
CDK5RAP3-230ENST00000584042 XPCQ01831 940 aaPredicted RBP22.64■■□□□ 1.21
CDK5RAP3-230ENST00000584042 PHLPP1O60346 1717 aa22.64■■□□□ 1.21
CDK5RAP3-230ENST00000584042 ABTB2Q8N961 1025 aa22.63■■□□□ 1.21
CDK5RAP3-230ENST00000584042 NFAT5O94916 1531 aa22.62■■□□□ 1.21
CDK5RAP3-230ENST00000584042 DDX17Q92841 729 aaKnown RBP22.62■■□□□ 1.21
CDK5RAP3-230ENST00000584042 ZRANB1Q9UGI0 708 aa22.62■■□□□ 1.21
CDK5RAP3-230ENST00000584042 ABCA3Q99758 1704 aa22.62■■□□□ 1.21
CDK5RAP3-230ENST00000584042 USP19O94966 1318 aa22.61■■□□□ 1.21
CDK5RAP3-230ENST00000584042 SPATA31A3Q5VYP0 1347 aa22.61■■□□□ 1.21
CDK5RAP3-230ENST00000584042 UBAP1LF5GYI3 381 aa22.61■■□□□ 1.21
CDK5RAP3-230ENST00000584042 MAP2P11137 1827 aaKnown RBP22.61■■□□□ 1.21
CDK5RAP3-230ENST00000584042 COL22A1Q8NFW1 1626 aaPredicted RBP22.6■■□□□ 1.21
CDK5RAP3-230ENST00000584042 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
CDK5RAP3-230ENST00000584042 NLRP6P59044 892 aa22.59■■□□□ 1.21
CDK5RAP3-230ENST00000584042 LTN1O94822 1766 aa22.58■■□□□ 1.2
CDK5RAP3-230ENST00000584042 COL3A1P02461 1466 aaPredicted RBP22.56■■□□□ 1.2
CDK5RAP3-230ENST00000584042 TNNT2P45379 298 aaPredicted RBP22.56■■□□□ 1.2
CDK5RAP3-230ENST00000584042 MRS2Q9HD23 443 aa22.56■■□□□ 1.2
CDK5RAP3-230ENST00000584042 PEAK1Q9H792 1746 aa22.55■■□□□ 1.2
CDK5RAP3-230ENST00000584042 SHPRHQ149N8 1683 aa22.55■■□□□ 1.2
CDK5RAP3-230ENST00000584042 KIF24Q5T7B8 1368 aa22.53■■□□□ 1.2
CDK5RAP3-230ENST00000584042 ABCC6O95255 1503 aa22.53■■□□□ 1.2
CDK5RAP3-230ENST00000584042 NUTM2GQ5VZR2 741 aa22.53■■□□□ 1.2
CDK5RAP3-230ENST00000584042 KCNH5Q8NCM2 988 aa22.53■■□□□ 1.2
CDK5RAP3-230ENST00000584042 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
CDK5RAP3-230ENST00000584042 INSRP06213 1382 aa22.52■■□□□ 1.2
CDK5RAP3-230ENST00000584042 PIP4K2BP78356 416 aa22.52■■□□□ 1.2
CDK5RAP3-230ENST00000584042 CCDC184Q52MB2 194 aa22.52■■□□□ 1.2
CDK5RAP3-230ENST00000584042 PNPLA6Q8IY17 1366 aa22.51■■□□□ 1.19
CDK5RAP3-230ENST00000584042 MTHFSP49914 203 aa22.51■■□□□ 1.19
CDK5RAP3-230ENST00000584042 LMOD2Q6P5Q4 547 aa22.51■■□□□ 1.19
CDK5RAP3-230ENST00000584042 POLKQ9UBT6 870 aa22.5■■□□□ 1.19
CDK5RAP3-230ENST00000584042 LRRC59Q96AG4 307 aaKnown RBP22.49■■□□□ 1.19
CDK5RAP3-230ENST00000584042 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
CDK5RAP3-230ENST00000584042 FLT4P35916 1363 aa22.49■■□□□ 1.19
CDK5RAP3-230ENST00000584042 EMILIN1Q9Y6C2 1016 aa22.47■■□□□ 1.19
CDK5RAP3-230ENST00000584042 MAP3K19Q56UN5 1328 aa22.47■■□□□ 1.19
CDK5RAP3-230ENST00000584042 GCP02774 474 aa22.46■■□□□ 1.19
CDK5RAP3-230ENST00000584042 RRS1Q15050 365 aaKnown RBP22.46■■□□□ 1.19
CDK5RAP3-230ENST00000584042 SOX12O15370 315 aa22.45■■□□□ 1.18
CDK5RAP3-230ENST00000584042 CPDO75976 1380 aa22.45■■□□□ 1.18
CDK5RAP3-230ENST00000584042 FBLN1P23142 703 aa22.44■■□□□ 1.18
CDK5RAP3-230ENST00000584042 PNISRQ8TF01 805 aaKnown RBP22.43■■□□□ 1.18
CDK5RAP3-230ENST00000584042 COL18A1P39060 1754 aa22.43■■□□□ 1.18
CDK5RAP3-230ENST00000584042 RGPD1P0DJD0 1748 aa22.42■■□□□ 1.18
CDK5RAP3-230ENST00000584042 BLMP54132 1417 aaPredicted RBP22.41■■□□□ 1.18
CDK5RAP3-230ENST00000584042 ARHGEF25Q86VW2 580 aa22.41■■□□□ 1.18
CDK5RAP3-230ENST00000584042 LMO7Q8WWI1 1683 aa22.41■■□□□ 1.18
CDK5RAP3-230ENST00000584042 FAM208AQ9UK61 1670 aaKnown RBP22.39■■□□□ 1.18
CDK5RAP3-230ENST00000584042 PPM1GO15355 546 aaPredicted RBP22.39■■□□□ 1.17
CDK5RAP3-230ENST00000584042 JCADQ9P266 1359 aa22.38■■□□□ 1.17
CDK5RAP3-230ENST00000584042 HOXC9P31274 260 aa22.38■■□□□ 1.17
CDK5RAP3-230ENST00000584042 AMPHP49418 695 aa22.38■■□□□ 1.17
CDK5RAP3-230ENST00000584042 CAMTA1Q9Y6Y1 1673 aa22.37■■□□□ 1.17
CDK5RAP3-230ENST00000584042 DIAPH1O60610 1272 aaKnown RBP22.37■■□□□ 1.17
CDK5RAP3-230ENST00000584042 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
CDK5RAP3-230ENST00000584042 CABLES1Q8TDN4 633 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms