RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 QSER1Q2KHR3 1735 aa3.92□□□□□ -1.78
CTC1-207ENST00000580299 LMTK2Q8IWU2 1503 aa3.91□□□□□ -1.78
CTC1-207ENST00000580299 CCDC144AA2RUR9 1427 aa3.91□□□□□ -1.78
CTC1-207ENST00000580299 C11orf95C9JLR9 678 aaPredicted RBP3.91□□□□□ -1.78
CTC1-207ENST00000580299 PTGER2P43116 358 aa3.91□□□□□ -1.78
CTC1-207ENST00000580299 CDC42BPGQ6DT37 1551 aa3.91□□□□□ -1.78
CTC1-207ENST00000580299 KLHL34Q8N239 644 aa3.91□□□□□ -1.78
CTC1-207ENST00000580299 RRBP1Q9P2E9 1410 aaKnown RBP3.91□□□□□ -1.78
CTC1-207ENST00000580299 NRXN3Q9Y4C0 1643 aa3.91□□□□□ -1.78
CTC1-207ENST00000580299 USP19O94966 1318 aa3.91□□□□□ -1.78
CTC1-207ENST00000580299 GOLGB1Q14789 3259 aaKnown RBP3.9□□□□□ -1.78
CTC1-207ENST00000580299 COL24A1Q17RW2 1714 aa3.9□□□□□ -1.78
CTC1-207ENST00000580299 PARP4Q9UKK3 1724 aaKnown RBP3.9□□□□□ -1.78
CTC1-207ENST00000580299 PTPRUQ92729 1446 aa3.9□□□□□ -1.78
CTC1-207ENST00000580299 ERBINQ96RT1 1412 aa3.9□□□□□ -1.78
CTC1-207ENST00000580299 TOMM70O94826 608 aa3.9□□□□□ -1.79
CTC1-207ENST00000580299 HSPA1AP0DMV8 641 aaKnown RBP3.9□□□□□ -1.79
CTC1-207ENST00000580299 HSPA1BP0DMV9 641 aaKnown RBP3.9□□□□□ -1.79
CTC1-207ENST00000580299 PDE3BQ13370 1112 aa3.9□□□□□ -1.79
CTC1-207ENST00000580299 ORAI2Q96SN7 254 aa3.9□□□□□ -1.79
CTC1-207ENST00000580299 BCL11BQ9C0K0 894 aaPredicted RBP3.9□□□□□ -1.79
CTC1-207ENST00000580299 FOXD4L1Q9NU39 408 aa3.9□□□□□ -1.79
CTC1-207ENST00000580299 STK32BQ9NY57 414 aa3.9□□□□□ -1.79
CTC1-207ENST00000580299 PDE4DIPQ5VU43 2346 aa3.9□□□□□ -1.79
CTC1-207ENST00000580299 ZNF644Q9H582 1327 aaPredicted RBP3.9□□□□□ -1.79
CTC1-207ENST00000580299 PCNTO95613 3336 aa3.9□□□□□ -1.79
CTC1-207ENST00000580299 ADCY9O60503 1353 aa3.89□□□□□ -1.79
CTC1-207ENST00000580299 RGPD8O14715 1765 aaPredicted RBP3.89□□□□□ -1.79
CTC1-207ENST00000580299 TNS3Q68CZ2 1445 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 PIK3C2AO00443 1686 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 TNRC6CQ9HCJ0 1690 aaKnown RBP3.88□□□□□ -1.79
CTC1-207ENST00000580299 FMN2Q9NZ56 1722 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 IFT172Q9UG01 1749 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 MYCNP04198 464 aaPredicted RBP3.88□□□□□ -1.79
CTC1-207ENST00000580299 CHGAP10645 457 aaKnown RBP3.88□□□□□ -1.79
CTC1-207ENST00000580299 POLD1P28340 1107 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 ESCO1Q5FWF5 840 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 C16orf71Q8IYS4 520 aaPredicted RBP3.88□□□□□ -1.79
CTC1-207ENST00000580299 SPATA31A5Q5VU36 1347 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 SPATA31A3Q5VYP0 1347 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 SPATA31A7Q8IWB4 1347 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 ARHGEF10O15013 1369 aa3.88□□□□□ -1.79
CTC1-207ENST00000580299 DHX57Q6P158 1386 aaKnown RBP3.88□□□□□ -1.79
CTC1-207ENST00000580299 WNK3Q9BYP7 1800 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 KIF3CO14782 793 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 XPCQ01831 940 aaPredicted RBP3.87□□□□□ -1.79
CTC1-207ENST00000580299 APLP2Q06481 763 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 SAMD1Q6SPF0 538 aaPredicted RBP3.87□□□□□ -1.79
CTC1-207ENST00000580299 ANO8Q9HCE9 1232 aaPredicted RBP3.87□□□□□ -1.79
CTC1-207ENST00000580299 BTG4Q9NY30 223 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 PKD1L3Q7Z443 1732 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 PEAK1Q9H792 1746 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 OVOS2A0A0G2JMS6 1433 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 OVOS2A0A0J9YW53 1432 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 CEP162Q5TB80 1403 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 OVOS2Q6IE36 1432 aa3.87□□□□□ -1.79
CTC1-207ENST00000580299 TUBGCP6Q96RT7 1819 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 TNRC18O15417 2968 aaPredicted RBP3.86□□□□□ -1.79
CTC1-207ENST00000580299 PLSCR1O15162 318 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 ZBTB22O15209 634 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 FOXO3O43524 673 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 PLEKHG5O94827 1062 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 UBTFP17480 764 aaKnown RBP3.86□□□□□ -1.79
CTC1-207ENST00000580299 PSME1Q06323 249 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 FSTL1Q12841 308 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 RBM46Q8TBY0 533 aaKnown RBP3.86□□□□□ -1.79
CTC1-207ENST00000580299 SGIP1Q9BQI5 828 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 CRYBG1Q9Y4K1 1723 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 KIF1BO60333 1816 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 HFM1A2PYH4 1435 aa3.86□□□□□ -1.79
CTC1-207ENST00000580299 KAT6BQ8WYB5 2073 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 ALS2Q96Q42 1657 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 SLC15A2Q16348 729 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 LMOD2Q6P5Q4 547 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 POTEHQ6S545 545 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 AIDAQ96BJ3 306 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 PDGFDQ9GZP0 370 aaPredicted RBP3.85□□□□□ -1.79
CTC1-207ENST00000580299 PRDM10Q9NQV6 1147 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 KIF15Q9NS87 1388 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 PRAG1Q86YV5 1406 aa3.85□□□□□ -1.79
CTC1-207ENST00000580299 E9PCH4 1651 aa3.84□□□□□ -1.79
CTC1-207ENST00000580299 ATXN8OSP0DMR3 200 aa3.84□□□□□ -1.79
CTC1-207ENST00000580299 YBX3P16989 372 aaKnown RBP eCLIP3.84□□□□□ -1.79
CTC1-207ENST00000580299 HTRA3P83110 453 aa3.84□□□□□ -1.79
CTC1-207ENST00000580299 KRT28Q7Z3Y7 464 aa3.84□□□□□ -1.79
CTC1-207ENST00000580299 PMFBP1Q8TBY8 1022 aa3.84□□□□□ -1.79
CTC1-207ENST00000580299 CABLES1Q8TDN4 633 aa3.84□□□□□ -1.79
CTC1-207ENST00000580299 ABHD8Q96I13 439 aa3.84□□□□□ -1.79
CTC1-207ENST00000580299 SPATA31A1Q5TZJ5 1347 aa3.84□□□□□ -1.79
CTC1-207ENST00000580299 LRRC37A3O60309 1634 aa3.84□□□□□ -1.8
CTC1-207ENST00000580299 CLTCL1P53675 1640 aa3.84□□□□□ -1.8
CTC1-207ENST00000580299 PAPPAQ13219 1627 aa3.84□□□□□ -1.8
CTC1-207ENST00000580299 CICQ96RK0 1608 aaPredicted RBP3.84□□□□□ -1.8
CTC1-207ENST00000580299 PHRF1Q9P1Y6 1649 aaKnown RBP3.84□□□□□ -1.8
CTC1-207ENST00000580299 TRPM3Q9HCF6 1732 aaPredicted RBP3.84□□□□□ -1.8
CTC1-207ENST00000580299 CCDC85CA6NKD9 419 aa3.83□□□□□ -1.8
CTC1-207ENST00000580299 CTCFP49711 727 aaPredicted RBP3.83□□□□□ -1.8
CTC1-207ENST00000580299 RGS19P49795 217 aa3.83□□□□□ -1.8
CTC1-207ENST00000580299 SLC16A10Q8TF71 515 aa3.83□□□□□ -1.8
CTC1-207ENST00000580299 CFAP44Q96MT7 982 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms