RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 CPSF1Q10570 1443 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-213ENST00000579609 EDC4Q6P2E9 1401 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-213ENST00000579609 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
PPP4R1-213ENST00000579609 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-213ENST00000579609 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
PPP4R1-213ENST00000579609 SRPK2P78362 688 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-213ENST00000579609 SLFN5Q08AF3 891 aa11.63□□□□□ -0.55
PPP4R1-213ENST00000579609 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
PPP4R1-213ENST00000579609 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
PPP4R1-213ENST00000579609 PNPLA6Q8IY17 1366 aa11.63□□□□□ -0.55
PPP4R1-213ENST00000579609 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
PPP4R1-213ENST00000579609 ADAMTS13Q76LX8 1427 aa11.62□□□□□ -0.55
PPP4R1-213ENST00000579609 AAMPQ13685 434 aa11.62□□□□□ -0.55
PPP4R1-213ENST00000579609 WDR63Q8IWG1 891 aa11.62□□□□□ -0.55
PPP4R1-213ENST00000579609 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
PPP4R1-213ENST00000579609 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
PPP4R1-213ENST00000579609 AATKQ6ZMQ8 1374 aa11.61□□□□□ -0.55
PPP4R1-213ENST00000579609 PIK3R4Q99570 1358 aa11.61□□□□□ -0.55
PPP4R1-213ENST00000579609 NRKQ7Z2Y5 1582 aa11.6□□□□□ -0.55
PPP4R1-213ENST00000579609 CT47B1P0C2W7 299 aaPredicted RBP11.6□□□□□ -0.55
PPP4R1-213ENST00000579609 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
PPP4R1-213ENST00000579609 CCDC136Q96JN2 1154 aa11.6□□□□□ -0.55
PPP4R1-213ENST00000579609 CDK19Q9BWU1 502 aa11.6□□□□□ -0.55
PPP4R1-213ENST00000579609 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
PPP4R1-213ENST00000579609 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
PPP4R1-213ENST00000579609 NUTM2DQ5VT03 806 aaPredicted RBP11.59□□□□□ -0.55
PPP4R1-213ENST00000579609 XRN1Q8IZH2 1706 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-213ENST00000579609 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
PPP4R1-213ENST00000579609 CDK12Q9NYV4 1490 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-213ENST00000579609 METP08581 1390 aa11.58□□□□□ -0.56
PPP4R1-213ENST00000579609 MTHFSP49914 203 aa11.58□□□□□ -0.56
PPP4R1-213ENST00000579609 IRX6P78412 446 aaPredicted RBP11.58□□□□□ -0.56
PPP4R1-213ENST00000579609 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
PPP4R1-213ENST00000579609 STK26Q9P289 416 aa11.58□□□□□ -0.56
PPP4R1-213ENST00000579609 IL16Q14005 1332 aa11.58□□□□□ -0.56
PPP4R1-213ENST00000579609 FANCIQ9NVI1 1328 aa11.58□□□□□ -0.56
PPP4R1-213ENST00000579609 APAF1O14727 1248 aa11.57□□□□□ -0.56
PPP4R1-213ENST00000579609 FYB1O15117 783 aa11.57□□□□□ -0.56
PPP4R1-213ENST00000579609 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
PPP4R1-213ENST00000579609 TBX22Q9Y458 520 aa11.57□□□□□ -0.56
PPP4R1-213ENST00000579609 EID1Q9Y6B2 187 aa11.57□□□□□ -0.56
PPP4R1-213ENST00000579609 PPIP5K1Q6PFW1 1433 aa11.57□□□□□ -0.56
PPP4R1-213ENST00000579609 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
PPP4R1-213ENST00000579609 USP54Q70EL1 1684 aa11.56□□□□□ -0.56
PPP4R1-213ENST00000579609 MLECQ14165 292 aa11.56□□□□□ -0.56
PPP4R1-213ENST00000579609 WWC1Q8IX03 1113 aa11.56□□□□□ -0.56
PPP4R1-213ENST00000579609 CEP170BQ9Y4F5 1589 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-213ENST00000579609 THEMISQ8N1K5 641 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-213ENST00000579609 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
PPP4R1-213ENST00000579609 RBM19Q9Y4C8 960 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-213ENST00000579609 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
PPP4R1-213ENST00000579609 MAP2P11137 1827 aaKnown RBP11.55□□□□□ -0.56
PPP4R1-213ENST00000579609 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-213ENST00000579609 MS4A1P11836 297 aa11.54□□□□□ -0.56
PPP4R1-213ENST00000579609 MYT1Q01538 1121 aa11.54□□□□□ -0.56
PPP4R1-213ENST00000579609 PDE3AQ14432 1141 aa11.54□□□□□ -0.56
PPP4R1-213ENST00000579609 B4GALNT3Q6L9W6 998 aa11.54□□□□□ -0.56
PPP4R1-213ENST00000579609 ANKARQ7Z5J8 1434 aa11.53□□□□□ -0.56
PPP4R1-213ENST00000579609 TCP11L2Q8N4U5 519 aa11.53□□□□□ -0.56
PPP4R1-213ENST00000579609 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
PPP4R1-213ENST00000579609 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
PPP4R1-213ENST00000579609 ADAMTSL3P82987 1691 aa11.52□□□□□ -0.56
PPP4R1-213ENST00000579609 SETD1BQ9UPS6 1966 aaKnown RBP11.52□□□□□ -0.56
PPP4R1-213ENST00000579609 PLEKHG3A1L390 1219 aa11.52□□□□□ -0.57
PPP4R1-213ENST00000579609 TCERG1O14776 1098 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-213ENST00000579609 FCHSD2O94868 740 aa11.52□□□□□ -0.57
PPP4R1-213ENST00000579609 DIAPH1O60610 1272 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-213ENST00000579609 SAFB2Q14151 953 aaKnown RBP eCLIP11.51□□□□□ -0.57
PPP4R1-213ENST00000579609 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
PPP4R1-213ENST00000579609 NUDT16Q96DE0 195 aaKnown RBP11.51□□□□□ -0.57
PPP4R1-213ENST00000579609 SALL2Q9Y467 1007 aaPredicted RBP11.51□□□□□ -0.57
PPP4R1-213ENST00000579609 ROBO2Q9HCK4 1378 aa11.51□□□□□ -0.57
PPP4R1-213ENST00000579609 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
PPP4R1-213ENST00000579609 ILDR1Q86SU0 546 aaPredicted RBP11.5□□□□□ -0.57
PPP4R1-213ENST00000579609 CCDC146Q8IYE0 955 aa11.5□□□□□ -0.57
PPP4R1-213ENST00000579609 EXOC6Q8TAG9 804 aa11.5□□□□□ -0.57
PPP4R1-213ENST00000579609 PLEKHF1Q96S99 279 aa11.5□□□□□ -0.57
PPP4R1-213ENST00000579609 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
PPP4R1-213ENST00000579609 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
PPP4R1-213ENST00000579609 FMN2Q9NZ56 1722 aa11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 NEFMP07197 916 aa11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 CENPQQ7L2Z9 268 aaPredicted RBP11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 WAPLQ7Z5K2 1190 aa11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 TXNDC2Q86VQ3 553 aa11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 GGNBP2Q9H3C7 697 aa11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 KIF24Q5T7B8 1368 aa11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 CHD2O14647 1828 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-213ENST00000579609 USP6P35125 1406 aa11.48□□□□□ -0.57
PPP4R1-213ENST00000579609 SSH2Q76I76 1423 aa11.48□□□□□ -0.57
PPP4R1-213ENST00000579609 PTPRUQ92729 1446 aa11.47□□□□□ -0.57
PPP4R1-213ENST00000579609 USP31Q70CQ4 1352 aa11.47□□□□□ -0.57
PPP4R1-213ENST00000579609 COG3Q96JB2 828 aa11.47□□□□□ -0.57
PPP4R1-213ENST00000579609 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.57
PPP4R1-213ENST00000579609 KDM2BQ8NHM5 1336 aa11.46□□□□□ -0.57
PPP4R1-213ENST00000579609 LTKP29376 864 aa11.46□□□□□ -0.57
PPP4R1-213ENST00000579609 TMPOP42166 694 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms