RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 NLRP1Q9C000 1473 aa12.51□□□□□ -0.41
BPTF-211ENST00000578307 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
BPTF-211ENST00000578307 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
BPTF-211ENST00000578307 WDR63Q8IWG1 891 aa12.5□□□□□ -0.41
BPTF-211ENST00000578307 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
BPTF-211ENST00000578307 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
BPTF-211ENST00000578307 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
BPTF-211ENST00000578307 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
BPTF-211ENST00000578307 METP08581 1390 aa12.49□□□□□ -0.41
BPTF-211ENST00000578307 COL3A1P02461 1466 aaPredicted RBP12.49□□□□□ -0.41
BPTF-211ENST00000578307 FAM135BQ49AJ0 1406 aa12.48□□□□□ -0.41
BPTF-211ENST00000578307 CPS1P31327 1500 aa12.48□□□□□ -0.41
BPTF-211ENST00000578307 WASLO00401 505 aaPredicted RBP12.47□□□□□ -0.41
BPTF-211ENST00000578307 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
BPTF-211ENST00000578307 TMEM2Q9UHN6 1383 aa12.47□□□□□ -0.41
BPTF-211ENST00000578307 TECPR2O15040 1411 aa12.47□□□□□ -0.41
BPTF-211ENST00000578307 U2SURPO15042 1029 aaKnown RBP12.47□□□□□ -0.41
BPTF-211ENST00000578307 BCAR3O75815 825 aa12.47□□□□□ -0.41
BPTF-211ENST00000578307 MS4A1P11836 297 aa12.46□□□□□ -0.41
BPTF-211ENST00000578307 PPIP5K1Q6PFW1 1433 aa12.46□□□□□ -0.41
BPTF-211ENST00000578307 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.42
BPTF-211ENST00000578307 CENPQQ7L2Z9 268 aaPredicted RBP12.46□□□□□ -0.42
BPTF-211ENST00000578307 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.42
BPTF-211ENST00000578307 MAPK8IP3Q9UPT6 1336 aa12.45□□□□□ -0.42
BPTF-211ENST00000578307 DIAPH1O60610 1272 aaKnown RBP12.45□□□□□ -0.42
BPTF-211ENST00000578307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
BPTF-211ENST00000578307 PNNQ9H307 717 aaKnown RBP12.45□□□□□ -0.42
BPTF-211ENST00000578307 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
BPTF-211ENST00000578307 MAP2P11137 1827 aaKnown RBP12.45□□□□□ -0.42
BPTF-211ENST00000578307 ITSN1Q15811 1721 aa12.44□□□□□ -0.42
BPTF-211ENST00000578307 EDC4Q6P2E9 1401 aaKnown RBP12.44□□□□□ -0.42
BPTF-211ENST00000578307 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
BPTF-211ENST00000578307 PNPLA6Q8IY17 1366 aa12.44□□□□□ -0.42
BPTF-211ENST00000578307 CPSF1Q10570 1443 aaKnown RBP12.44□□□□□ -0.42
BPTF-211ENST00000578307 PDE3AQ14432 1141 aa12.44□□□□□ -0.42
BPTF-211ENST00000578307 MON2Q7Z3U7 1717 aa12.44□□□□□ -0.42
BPTF-211ENST00000578307 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
BPTF-211ENST00000578307 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
BPTF-211ENST00000578307 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
BPTF-211ENST00000578307 NUDT16Q96DE0 195 aaKnown RBP12.43□□□□□ -0.42
BPTF-211ENST00000578307 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
BPTF-211ENST00000578307 C3P01024 1663 aa12.42□□□□□ -0.42
BPTF-211ENST00000578307 PLEKHG1Q9ULL1 1385 aa12.42□□□□□ -0.42
BPTF-211ENST00000578307 ADAMTS13Q76LX8 1427 aa12.42□□□□□ -0.42
BPTF-211ENST00000578307 TMPOP42166 694 aaKnown RBP12.41□□□□□ -0.42
BPTF-211ENST00000578307 RARSP54136 660 aaKnown RBP12.41□□□□□ -0.42
BPTF-211ENST00000578307 ZMYND15Q9H091 742 aa12.41□□□□□ -0.42
BPTF-211ENST00000578307 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
BPTF-211ENST00000578307 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
BPTF-211ENST00000578307 PDE4AP27815 886 aa12.41□□□□□ -0.42
BPTF-211ENST00000578307 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
BPTF-211ENST00000578307 FRAT1Q92837 279 aaPredicted RBP12.4□□□□□ -0.42
BPTF-211ENST00000578307 NEFMP07197 916 aa12.4□□□□□ -0.43
BPTF-211ENST00000578307 POLKQ9UBT6 870 aa12.4□□□□□ -0.43
BPTF-211ENST00000578307 EID1Q9Y6B2 187 aa12.4□□□□□ -0.43
BPTF-211ENST00000578307 ROBO2Q9HCK4 1378 aa12.39□□□□□ -0.43
BPTF-211ENST00000578307 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
BPTF-211ENST00000578307 FCHSD2O94868 740 aa12.39□□□□□ -0.43
BPTF-211ENST00000578307 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
BPTF-211ENST00000578307 NBR1Q14596 966 aa12.39□□□□□ -0.43
BPTF-211ENST00000578307 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
BPTF-211ENST00000578307 BACH2Q9BYV9 841 aa12.39□□□□□ -0.43
BPTF-211ENST00000578307 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
BPTF-211ENST00000578307 LTKP29376 864 aa12.38□□□□□ -0.43
BPTF-211ENST00000578307 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
BPTF-211ENST00000578307 IL16Q14005 1332 aa12.38□□□□□ -0.43
BPTF-211ENST00000578307 RIPK4P57078 832 aa12.38□□□□□ -0.43
BPTF-211ENST00000578307 NME9Q86XW9 330 aa12.38□□□□□ -0.43
BPTF-211ENST00000578307 COG3Q96JB2 828 aa12.38□□□□□ -0.43
BPTF-211ENST00000578307 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
BPTF-211ENST00000578307 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.38□□□□□ -0.43
BPTF-211ENST00000578307 CDK12Q9NYV4 1490 aaPredicted RBP12.37□□□□□ -0.43
BPTF-211ENST00000578307 AATKQ6ZMQ8 1374 aa12.37□□□□□ -0.43
BPTF-211ENST00000578307 AAMPQ13685 434 aa12.37□□□□□ -0.43
BPTF-211ENST00000578307 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
BPTF-211ENST00000578307 COG6Q9Y2V7 657 aa12.37□□□□□ -0.43
BPTF-211ENST00000578307 SLIT1O75093 1534 aa12.37□□□□□ -0.43
BPTF-211ENST00000578307 TOPAZ1Q8N9V7 1692 aa12.37□□□□□ -0.43
BPTF-211ENST00000578307 CLUAP1Q96AJ1 413 aa12.37□□□□□ -0.43
BPTF-211ENST00000578307 NCKAP5LQ9HCH0 1330 aa12.36□□□□□ -0.43
BPTF-211ENST00000578307 IPO9Q96P70 1041 aaKnown RBP12.36□□□□□ -0.43
BPTF-211ENST00000578307 ARHGAP23Q9P227 1491 aa12.36□□□□□ -0.43
BPTF-211ENST00000578307 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
BPTF-211ENST00000578307 FBLN1P23142 703 aa12.35□□□□□ -0.43
BPTF-211ENST00000578307 TSR2Q969E8 191 aaKnown RBP12.35□□□□□ -0.43
BPTF-211ENST00000578307 PRKAR2BP31323 418 aa12.35□□□□□ -0.43
BPTF-211ENST00000578307 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
BPTF-211ENST00000578307 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
BPTF-211ENST00000578307 EMILIN1Q9Y6C2 1016 aa12.35□□□□□ -0.43
BPTF-211ENST00000578307 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
BPTF-211ENST00000578307 NRKQ7Z2Y5 1582 aa12.34□□□□□ -0.43
BPTF-211ENST00000578307 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
BPTF-211ENST00000578307 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
BPTF-211ENST00000578307 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
BPTF-211ENST00000578307 DIP2AQ14689 1571 aa12.33□□□□□ -0.44
BPTF-211ENST00000578307 PTPRUQ92729 1446 aa12.33□□□□□ -0.44
BPTF-211ENST00000578307 ZKSCAN2Q63HK3 967 aa12.33□□□□□ -0.44
BPTF-211ENST00000578307 NPM2Q86SE8 214 aaKnown RBP12.33□□□□□ -0.44
BPTF-211ENST00000578307 THEMISQ8N1K5 641 aaPredicted RBP12.33□□□□□ -0.44
BPTF-211ENST00000578307 IL13P35225 146 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms