RNA–Protein interactions for RNA: ENST00000570021.1

SIN3A-213, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 3

Gene SIN3A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-213ENST00000570021 ZFP42Q96MM3 310 aa10.22□□□□□ -0.77
SIN3A-213ENST00000570021 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
SIN3A-213ENST00000570021 TLL2Q9Y6L7 1015 aa10.22□□□□□ -0.77
SIN3A-213ENST00000570021 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.77
SIN3A-213ENST00000570021 LINC01559Q495D7 138 aa10.21□□□□□ -0.77
SIN3A-213ENST00000570021 VARSP26640 1264 aaKnown RBP10.2□□□□□ -0.78
SIN3A-213ENST00000570021 BAP1Q92560 729 aa10.2□□□□□ -0.78
SIN3A-213ENST00000570021 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
SIN3A-213ENST00000570021 KCNH2Q12809 1159 aa10.19□□□□□ -0.78
SIN3A-213ENST00000570021 MPNDQ8N594 471 aa10.19□□□□□ -0.78
SIN3A-213ENST00000570021 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
SIN3A-213ENST00000570021 NNTQ13423 1086 aa10.18□□□□□ -0.78
SIN3A-213ENST00000570021 ZNF511Q8NB15 262 aa10.18□□□□□ -0.78
SIN3A-213ENST00000570021 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
SIN3A-213ENST00000570021 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
SIN3A-213ENST00000570021 PRR7Q8TB68 274 aa10.17□□□□□ -0.78
SIN3A-213ENST00000570021 NDUFV2P19404 249 aa10.16□□□□□ -0.78
SIN3A-213ENST00000570021 SCARF1Q14162 830 aa10.16□□□□□ -0.78
SIN3A-213ENST00000570021 DESI1Q6ICB0 168 aa10.16□□□□□ -0.78
SIN3A-213ENST00000570021 SPDYE5A6NIY4 337 aa10.15□□□□□ -0.78
SIN3A-213ENST00000570021 MOXD2PA6NHM9 499 aa10.14□□□□□ -0.79
SIN3A-213ENST00000570021 ADH1CP00326 375 aa10.14□□□□□ -0.79
SIN3A-213ENST00000570021 TIMP2P16035 220 aa10.14□□□□□ -0.79
SIN3A-213ENST00000570021 MTMR2Q13614 643 aa10.14□□□□□ -0.79
SIN3A-213ENST00000570021 NESP48681 1621 aa10.14□□□□□ -0.79
SIN3A-213ENST00000570021 WDR4P57081 412 aaKnown RBP10.13□□□□□ -0.79
SIN3A-213ENST00000570021 PURBQ96QR8 312 aaKnown RBP10.13□□□□□ -0.79
SIN3A-213ENST00000570021 FAM174AQ8TBP5 190 aa10.11□□□□□ -0.79
SIN3A-213ENST00000570021 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
SIN3A-213ENST00000570021 TTLL12Q14166 644 aaPredicted RBP10.1□□□□□ -0.79
SIN3A-213ENST00000570021 KLF16Q9BXK1 252 aaPredicted RBP10.1□□□□□ -0.79
SIN3A-213ENST00000570021 CTHP32929 405 aa10.09□□□□□ -0.79
SIN3A-213ENST00000570021 SOBPA7XYQ1 873 aa10.08□□□□□ -0.8
SIN3A-213ENST00000570021 LYPD8Q6UX82 237 aa10.08□□□□□ -0.8
SIN3A-213ENST00000570021 CDK15Q96Q40 435 aa10.08□□□□□ -0.8
SIN3A-213ENST00000570021 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
SIN3A-213ENST00000570021 GJA5P36382 358 aa10.07□□□□□ -0.8
SIN3A-213ENST00000570021 SUZ12Q15022 739 aaKnown RBP10.06□□□□□ -0.8
SIN3A-213ENST00000570021 AMHR2Q16671 573 aa10.06□□□□□ -0.8
SIN3A-213ENST00000570021 MAN1A2O60476 641 aa10.05□□□□□ -0.8
SIN3A-213ENST00000570021 ZIC2O95409 532 aaPredicted RBP10.05□□□□□ -0.8
SIN3A-213ENST00000570021 ARID5BQ14865 1188 aa10.05□□□□□ -0.8
SIN3A-213ENST00000570021 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
SIN3A-213ENST00000570021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
SIN3A-213ENST00000570021 DIXDC1Q155Q3 683 aa10.04□□□□□ -0.8
SIN3A-213ENST00000570021 FOXJ1Q92949 421 aa10.04□□□□□ -0.8
SIN3A-213ENST00000570021 BEGAINQ9BUH8 593 aa10.04□□□□□ -0.8
SIN3A-213ENST00000570021 ZFAND3Q9H8U3 227 aa10.04□□□□□ -0.8
SIN3A-213ENST00000570021 NR5A1Q13285 461 aa10.03□□□□□ -0.8
SIN3A-213ENST00000570021 RSBN1LQ6PCB5 846 aaPredicted RBP10.03□□□□□ -0.8
SIN3A-213ENST00000570021 VSIG10Q8N0Z9 540 aa10.03□□□□□ -0.8
SIN3A-213ENST00000570021 THOC2Q8NI27 1593 aaKnown RBP10.03□□□□□ -0.8
SIN3A-213ENST00000570021 ITPKCQ96DU7 683 aa10.03□□□□□ -0.8
SIN3A-213ENST00000570021 CFAP99D6REC4 459 aa10.02□□□□□ -0.81
SIN3A-213ENST00000570021 F12P00748 615 aaPredicted RBP10.02□□□□□ -0.81
SIN3A-213ENST00000570021 C6orf118Q5T5N4 469 aa10.02□□□□□ -0.81
SIN3A-213ENST00000570021 BARGINQ6ZT62 677 aa10.02□□□□□ -0.81
SIN3A-213ENST00000570021 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
SIN3A-213ENST00000570021 MAP10Q9P2G4 905 aa10.02□□□□□ -0.81
SIN3A-213ENST00000570021 NR3C2P08235 984 aa10.01□□□□□ -0.81
SIN3A-213ENST00000570021 PCDHB15Q9Y5E8 787 aa10.01□□□□□ -0.81
SIN3A-213ENST00000570021 ATAD2BQ9ULI0 1458 aa10□□□□□ -0.81
SIN3A-213ENST00000570021 UPP2O95045 317 aa10□□□□□ -0.81
SIN3A-213ENST00000570021 AGERQ15109 404 aa10□□□□□ -0.81
SIN3A-213ENST00000570021 ZBTB3Q9H5J0 574 aa10□□□□□ -0.81
SIN3A-213ENST00000570021 PPFIA3O75145 1194 aa9.99□□□□□ -0.81
SIN3A-213ENST00000570021 BMP2P12643 396 aa9.99□□□□□ -0.81
SIN3A-213ENST00000570021 HRCP23327 699 aa9.99□□□□□ -0.81
SIN3A-213ENST00000570021 BPHLQ86WA6 291 aaPredicted RBP9.99□□□□□ -0.81
SIN3A-213ENST00000570021 SPTLC1O15269 473 aa9.98□□□□□ -0.81
SIN3A-213ENST00000570021 ZMYND10O75800 440 aa9.98□□□□□ -0.81
SIN3A-213ENST00000570021 GRM5P41594 1212 aa9.98□□□□□ -0.81
SIN3A-213ENST00000570021 C4orf48Q5BLP8 95 aa9.98□□□□□ -0.81
SIN3A-213ENST00000570021 LINC00528Q8N1L1 170 aa9.98□□□□□ -0.81
SIN3A-213ENST00000570021 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
SIN3A-213ENST00000570021 MEIOBQ8N635 442 aa9.97□□□□□ -0.81
SIN3A-213ENST00000570021 KCNMA1Q12791 1236 aa9.95□□□□□ -0.82
SIN3A-213ENST00000570021 SMARCA2P51531 1590 aa9.94□□□□□ -0.82
SIN3A-213ENST00000570021 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
SIN3A-213ENST00000570021 RIC3Q7Z5B4 369 aa9.94□□□□□ -0.82
SIN3A-213ENST00000570021 DNMT3LQ9UJW3 386 aa9.94□□□□□ -0.82
SIN3A-213ENST00000570021 PER1O15534 1290 aaPredicted RBP9.93□□□□□ -0.82
SIN3A-213ENST00000570021 PARP9Q8IXQ6 854 aa9.93□□□□□ -0.82
SIN3A-213ENST00000570021 ARMC2Q8NEN0 867 aa9.93□□□□□ -0.82
SIN3A-213ENST00000570021 CABLES1Q8TDN4 633 aa9.93□□□□□ -0.82
SIN3A-213ENST00000570021 C1QTNF2Q9BXJ5 285 aa9.92□□□□□ -0.82
SIN3A-213ENST00000570021 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
SIN3A-213ENST00000570021 FSHRP23945 695 aa9.91□□□□□ -0.82
SIN3A-213ENST00000570021 SH3RF1Q7Z6J0 888 aa9.91□□□□□ -0.82
SIN3A-213ENST00000570021 ZC3H15Q8WU90 426 aaKnown RBP9.91□□□□□ -0.82
SIN3A-213ENST00000570021 TSEN34Q9BSV6 310 aaKnown RBP9.91□□□□□ -0.82
SIN3A-213ENST00000570021 GSK3AP49840 483 aa9.9□□□□□ -0.82
SIN3A-213ENST00000570021 CSPP1Q1MSJ5 1256 aa9.9□□□□□ -0.82
SIN3A-213ENST00000570021 VASH1Q7L8A9 365 aaPredicted RBP9.9□□□□□ -0.82
SIN3A-213ENST00000570021 TSC1Q92574 1164 aa9.9□□□□□ -0.82
SIN3A-213ENST00000570021 EMILIN1Q9Y6C2 1016 aa9.9□□□□□ -0.82
SIN3A-213ENST00000570021 HMGXB3Q12766 1538 aa9.89□□□□□ -0.83
SIN3A-213ENST00000570021 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.89□□□□□ -0.83
SIN3A-213ENST00000570021 NBPF14Q5TI25 921 aa9.89□□□□□ -0.83
SIN3A-213ENST00000570021 TRMT44Q8IYL2 757 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms