RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 R3HDM1Q15032 1099 aaKnown RBP12.21□□□□□ -0.45
KLHDC4-220ENST00000568338 VPS72Q15906 364 aa12.21□□□□□ -0.45
KLHDC4-220ENST00000568338 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
KLHDC4-220ENST00000568338 DCAF11Q8TEB1 546 aa12.21□□□□□ -0.45
KLHDC4-220ENST00000568338 USP32Q8NFA0 1604 aa12.21□□□□□ -0.46
KLHDC4-220ENST00000568338 CDC42BPGQ6DT37 1551 aa12.21□□□□□ -0.46
KLHDC4-220ENST00000568338 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.46
KLHDC4-220ENST00000568338 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
KLHDC4-220ENST00000568338 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
KLHDC4-220ENST00000568338 EN1Q05925 392 aaPredicted RBP12.18□□□□□ -0.46
KLHDC4-220ENST00000568338 TRPM1Q7Z4N2 1603 aa12.18□□□□□ -0.46
KLHDC4-220ENST00000568338 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
KLHDC4-220ENST00000568338 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
KLHDC4-220ENST00000568338 ONECUT3O60422 494 aaPredicted RBP12.17□□□□□ -0.46
KLHDC4-220ENST00000568338 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
KLHDC4-220ENST00000568338 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
KLHDC4-220ENST00000568338 RGPD1P0DJD0 1748 aa12.15□□□□□ -0.46
KLHDC4-220ENST00000568338 KIAA1210Q9ULL0 1709 aa12.15□□□□□ -0.46
KLHDC4-220ENST00000568338 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
KLHDC4-220ENST00000568338 NBPF8Q3BBV2 869 aa12.15□□□□□ -0.46
KLHDC4-220ENST00000568338 PLCH1Q4KWH8 1693 aa12.15□□□□□ -0.46
KLHDC4-220ENST00000568338 NRXN1Q9ULB1 1477 aa12.14□□□□□ -0.47
KLHDC4-220ENST00000568338 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
KLHDC4-220ENST00000568338 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
KLHDC4-220ENST00000568338 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
KLHDC4-220ENST00000568338 ADGRB2O60241 1585 aa12.13□□□□□ -0.47
KLHDC4-220ENST00000568338 KIF1AQ12756 1690 aa12.13□□□□□ -0.47
KLHDC4-220ENST00000568338 DISP2A7MBM2 1401 aa12.13□□□□□ -0.47
KLHDC4-220ENST00000568338 TNS3Q68CZ2 1445 aa12.12□□□□□ -0.47
KLHDC4-220ENST00000568338 KRT28Q7Z3Y7 464 aa12.12□□□□□ -0.47
KLHDC4-220ENST00000568338 PROM2Q8N271 834 aa12.12□□□□□ -0.47
KLHDC4-220ENST00000568338 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
KLHDC4-220ENST00000568338 ROCK2O75116 1388 aaKnown RBP12.11□□□□□ -0.47
KLHDC4-220ENST00000568338 PSME1Q06323 249 aa12.11□□□□□ -0.47
KLHDC4-220ENST00000568338 EZH2Q15910 746 aaKnown RBP12.11□□□□□ -0.47
KLHDC4-220ENST00000568338 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
KLHDC4-220ENST00000568338 PPP1R1BQ9UD71 204 aaPredicted RBP12.11□□□□□ -0.47
KLHDC4-220ENST00000568338 PIK3C2GO75747 1445 aa12.11□□□□□ -0.47
KLHDC4-220ENST00000568338 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
KLHDC4-220ENST00000568338 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
KLHDC4-220ENST00000568338 ADGRF5Q8IZF2 1346 aa12.1□□□□□ -0.47
KLHDC4-220ENST00000568338 ARHGEF10O15013 1369 aa12.09□□□□□ -0.47
KLHDC4-220ENST00000568338 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
KLHDC4-220ENST00000568338 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.47
KLHDC4-220ENST00000568338 PARD3Q8TEW0 1356 aa12.08□□□□□ -0.48
KLHDC4-220ENST00000568338 ZNF316A6NFI3 1004 aaPredicted RBP12.08□□□□□ -0.48
KLHDC4-220ENST00000568338 PRKAR2AP13861 404 aaKnown RBP12.08□□□□□ -0.48
KLHDC4-220ENST00000568338 STK26Q9P289 416 aa12.08□□□□□ -0.48
KLHDC4-220ENST00000568338 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
KLHDC4-220ENST00000568338 EIF4G2P78344 907 aaKnown RBP eCLIP12.07□□□□□ -0.48
KLHDC4-220ENST00000568338 WAPLQ7Z5K2 1190 aa12.07□□□□□ -0.48
KLHDC4-220ENST00000568338 ABCA3Q99758 1704 aa12.07□□□□□ -0.48
KLHDC4-220ENST00000568338 CARD11Q9BXL7 1154 aa12.07□□□□□ -0.48
KLHDC4-220ENST00000568338 BTG4Q9NY30 223 aa12.07□□□□□ -0.48
KLHDC4-220ENST00000568338 FMN2Q9NZ56 1722 aa12.07□□□□□ -0.48
KLHDC4-220ENST00000568338 SBNO1A3KN83 1393 aa12.06□□□□□ -0.48
KLHDC4-220ENST00000568338 USP47Q96K76 1375 aa12.06□□□□□ -0.48
KLHDC4-220ENST00000568338 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
KLHDC4-220ENST00000568338 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
KLHDC4-220ENST00000568338 NBPF14Q5TI25 921 aa12.06□□□□□ -0.48
KLHDC4-220ENST00000568338 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
KLHDC4-220ENST00000568338 SPON1Q9HCB6 807 aa12.06□□□□□ -0.48
KLHDC4-220ENST00000568338 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
KLHDC4-220ENST00000568338 TECPR2O15040 1411 aa12.05□□□□□ -0.48
KLHDC4-220ENST00000568338 TRIM37O94972 964 aa12.05□□□□□ -0.48
KLHDC4-220ENST00000568338 APBA3O96018 575 aa12.05□□□□□ -0.48
KLHDC4-220ENST00000568338 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
KLHDC4-220ENST00000568338 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
KLHDC4-220ENST00000568338 HSPA5P11021 654 aaKnown RBP12.04□□□□□ -0.48
KLHDC4-220ENST00000568338 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
KLHDC4-220ENST00000568338 ADGRB1O14514 1584 aa12.04□□□□□ -0.48
KLHDC4-220ENST00000568338 THSD7AQ9UPZ6 1657 aa12.03□□□□□ -0.48
KLHDC4-220ENST00000568338 FKBP8Q14318 412 aa12.03□□□□□ -0.48
KLHDC4-220ENST00000568338 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
KLHDC4-220ENST00000568338 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
KLHDC4-220ENST00000568338 SPATA31A5Q5VU36 1347 aa12.03□□□□□ -0.48
KLHDC4-220ENST00000568338 SPATA31A7Q8IWB4 1347 aa12.03□□□□□ -0.48
KLHDC4-220ENST00000568338 PLEKHH1Q9ULM0 1364 aa12.03□□□□□ -0.48
KLHDC4-220ENST00000568338 COL14A1Q05707 1796 aaKnown RBP12.02□□□□□ -0.48
KLHDC4-220ENST00000568338 KCNQ2O43526 872 aa12.02□□□□□ -0.49
KLHDC4-220ENST00000568338 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
KLHDC4-220ENST00000568338 C14orf93Q9H972 538 aaKnown RBP12.02□□□□□ -0.49
KLHDC4-220ENST00000568338 EIF3AQ14152 1382 aaKnown RBP12.02□□□□□ -0.49
KLHDC4-220ENST00000568338 ABCC11Q96J66 1382 aa12.01□□□□□ -0.49
KLHDC4-220ENST00000568338 RREB1Q92766 1687 aa12□□□□□ -0.49
KLHDC4-220ENST00000568338 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
KLHDC4-220ENST00000568338 ZNF784Q8NCA9 323 aaPredicted RBP12□□□□□ -0.49
KLHDC4-220ENST00000568338 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
KLHDC4-220ENST00000568338 ARHGEF28Q8N1W1 1705 aaKnown RBP11.99□□□□□ -0.49
KLHDC4-220ENST00000568338 TMEM132EQ6IEE7 984 aa11.98□□□□□ -0.49
KLHDC4-220ENST00000568338 HIRIP3Q9BW71 556 aaPredicted RBP11.98□□□□□ -0.49
KLHDC4-220ENST00000568338 PRDM11Q9NQV5 511 aa11.98□□□□□ -0.49
KLHDC4-220ENST00000568338 CAMTA1Q9Y6Y1 1673 aa11.97□□□□□ -0.49
KLHDC4-220ENST00000568338 YTHDC2Q9H6S0 1430 aaKnown RBP11.97□□□□□ -0.49
KLHDC4-220ENST00000568338 SPATA31A1Q5TZJ5 1347 aa11.97□□□□□ -0.49
KLHDC4-220ENST00000568338 C1QTNF8P60827 252 aa11.97□□□□□ -0.49
KLHDC4-220ENST00000568338 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
KLHDC4-220ENST00000568338 PMFBP1Q8TBY8 1022 aa11.97□□□□□ -0.49
KLHDC4-220ENST00000568338 ST20-MTHFSA0A0A6YYL1 179 aa11.96□□□□□ -0.49
KLHDC4-220ENST00000568338 QRICH2Q9H0J4 1663 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms