RNA–Protein interactions for RNA: ENST00000566416.1

VAC14-207, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 780 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-207ENST00000566416 SIN3AQ96ST3 1273 aa13.3□□□□□ -0.28
VAC14-207ENST00000566416 DSG2Q14126 1118 aa13.29□□□□□ -0.28
VAC14-207ENST00000566416 SMYD5Q6GMV2 418 aa13.29□□□□□ -0.28
VAC14-207ENST00000566416 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.29□□□□□ -0.28
VAC14-207ENST00000566416 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
VAC14-207ENST00000566416 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
VAC14-207ENST00000566416 ZNF326Q5BKZ1 582 aaKnown RBP13.28□□□□□ -0.28
VAC14-207ENST00000566416 NUTM2DQ5VT03 806 aaPredicted RBP13.28□□□□□ -0.28
VAC14-207ENST00000566416 TMEM121BQ9BXQ6 578 aaPredicted RBP13.28□□□□□ -0.28
VAC14-207ENST00000566416 CCDC144AA2RUR9 1427 aa13.28□□□□□ -0.28
VAC14-207ENST00000566416 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
VAC14-207ENST00000566416 PIP4K2BP78356 416 aa13.27□□□□□ -0.29
VAC14-207ENST00000566416 EMILIN3Q9NT22 766 aa13.27□□□□□ -0.29
VAC14-207ENST00000566416 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
VAC14-207ENST00000566416 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
VAC14-207ENST00000566416 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
VAC14-207ENST00000566416 KCNA6P17658 529 aa13.25□□□□□ -0.29
VAC14-207ENST00000566416 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
VAC14-207ENST00000566416 BOLA1Q9Y3E2 137 aa13.25□□□□□ -0.29
VAC14-207ENST00000566416 PPLO60437 1756 aa13.25□□□□□ -0.29
VAC14-207ENST00000566416 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
VAC14-207ENST00000566416 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
VAC14-207ENST00000566416 FOXK1P85037 733 aa13.24□□□□□ -0.29
VAC14-207ENST00000566416 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
VAC14-207ENST00000566416 DPYSL4O14531 572 aa13.23□□□□□ -0.29
VAC14-207ENST00000566416 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
VAC14-207ENST00000566416 KIF3CO14782 793 aa13.21□□□□□ -0.29
VAC14-207ENST00000566416 TBX22Q9Y458 520 aa13.21□□□□□ -0.29
VAC14-207ENST00000566416 NKTRP30414 1462 aaKnown RBP13.21□□□□□ -0.3
VAC14-207ENST00000566416 NRXN3Q9Y4C0 1643 aa13.21□□□□□ -0.3
VAC14-207ENST00000566416 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
VAC14-207ENST00000566416 C2orf72A6NCS6 295 aa13.2□□□□□ -0.3
VAC14-207ENST00000566416 PLCG2P16885 1265 aa13.2□□□□□ -0.3
VAC14-207ENST00000566416 ALKQ9UM73 1620 aa13.2□□□□□ -0.3
VAC14-207ENST00000566416 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
VAC14-207ENST00000566416 ZMYND10O75800 440 aa13.19□□□□□ -0.3
VAC14-207ENST00000566416 GABBR2O75899 941 aa13.19□□□□□ -0.3
VAC14-207ENST00000566416 PDIA6Q15084 440 aa13.19□□□□□ -0.3
VAC14-207ENST00000566416 L3MBTL2Q969R5 705 aa13.19□□□□□ -0.3
VAC14-207ENST00000566416 RBM33Q96EV2 1170 aaKnown RBP13.19□□□□□ -0.3
VAC14-207ENST00000566416 IFT172Q9UG01 1749 aa13.19□□□□□ -0.3
VAC14-207ENST00000566416 TMEM132AQ24JP5 1023 aa13.18□□□□□ -0.3
VAC14-207ENST00000566416 PLPP6Q8IY26 295 aa13.18□□□□□ -0.3
VAC14-207ENST00000566416 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
VAC14-207ENST00000566416 SPATA31E1Q6ZUB1 1445 aa13.18□□□□□ -0.3
VAC14-207ENST00000566416 ADAMTS13Q76LX8 1427 aa13.18□□□□□ -0.3
VAC14-207ENST00000566416 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
VAC14-207ENST00000566416 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
VAC14-207ENST00000566416 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
VAC14-207ENST00000566416 G3V3G9 751 aa13.17□□□□□ -0.3
VAC14-207ENST00000566416 C14orf37Q86TY3 774 aa13.17□□□□□ -0.3
VAC14-207ENST00000566416 ROBO1Q9Y6N7 1651 aa13.17□□□□□ -0.3
VAC14-207ENST00000566416 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
VAC14-207ENST00000566416 HSPA1LP34931 641 aa13.16□□□□□ -0.3
VAC14-207ENST00000566416 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
VAC14-207ENST00000566416 RBM26Q5T8P6 1007 aaKnown RBP13.16□□□□□ -0.3
VAC14-207ENST00000566416 MSH6P52701 1360 aa13.16□□□□□ -0.3
VAC14-207ENST00000566416 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
VAC14-207ENST00000566416 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
VAC14-207ENST00000566416 PELP1Q8IZL8 1130 aaKnown RBP13.15□□□□□ -0.3
VAC14-207ENST00000566416 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
VAC14-207ENST00000566416 LAMC1P11047 1609 aa13.14□□□□□ -0.31
VAC14-207ENST00000566416 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
VAC14-207ENST00000566416 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
VAC14-207ENST00000566416 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
VAC14-207ENST00000566416 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
VAC14-207ENST00000566416 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
VAC14-207ENST00000566416 RGL3Q3MIN7 710 aa13.13□□□□□ -0.31
VAC14-207ENST00000566416 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
VAC14-207ENST00000566416 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
VAC14-207ENST00000566416 MYOM2P54296 1465 aa13.12□□□□□ -0.31
VAC14-207ENST00000566416 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
VAC14-207ENST00000566416 BARGINQ6ZT62 677 aa13.12□□□□□ -0.31
VAC14-207ENST00000566416 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
VAC14-207ENST00000566416 PRAG1Q86YV5 1406 aa13.11□□□□□ -0.31
VAC14-207ENST00000566416 PTPRUQ92729 1446 aa13.11□□□□□ -0.31
VAC14-207ENST00000566416 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
VAC14-207ENST00000566416 GPIHBP1Q8IV16 184 aa13.1□□□□□ -0.31
VAC14-207ENST00000566416 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
VAC14-207ENST00000566416 NALCNQ8IZF0 1738 aa13.1□□□□□ -0.31
VAC14-207ENST00000566416 METP08581 1390 aa13.09□□□□□ -0.31
VAC14-207ENST00000566416 ATF3P18847 181 aa13.09□□□□□ -0.31
VAC14-207ENST00000566416 DCBLD2Q96PD2 775 aa13.09□□□□□ -0.31
VAC14-207ENST00000566416 FAM135BQ49AJ0 1406 aa13.08□□□□□ -0.32
VAC14-207ENST00000566416 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
VAC14-207ENST00000566416 SLAIN2Q9P270 581 aa13.08□□□□□ -0.32
VAC14-207ENST00000566416 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
VAC14-207ENST00000566416 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
VAC14-207ENST00000566416 SEC24BO95487 1268 aa13.07□□□□□ -0.32
VAC14-207ENST00000566416 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
VAC14-207ENST00000566416 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
VAC14-207ENST00000566416 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
VAC14-207ENST00000566416 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
VAC14-207ENST00000566416 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
VAC14-207ENST00000566416 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
VAC14-207ENST00000566416 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
VAC14-207ENST00000566416 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
VAC14-207ENST00000566416 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
VAC14-207ENST00000566416 ADGRF5Q8IZF2 1346 aa13.04□□□□□ -0.32
VAC14-207ENST00000566416 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms