RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
CFDP1-205ENST00000565646 CPSF1Q10570 1443 aaKnown RBP17.69■□□□□ 0.42
CFDP1-205ENST00000565646 MON2Q7Z3U7 1717 aa17.69■□□□□ 0.42
CFDP1-205ENST00000565646 PNPLA6Q8IY17 1366 aa17.68■□□□□ 0.42
CFDP1-205ENST00000565646 TMC1Q8TDI8 760 aa17.68■□□□□ 0.42
CFDP1-205ENST00000565646 ACEP12821 1306 aa17.68■□□□□ 0.42
CFDP1-205ENST00000565646 ADAMTS2O95450 1211 aa17.67■□□□□ 0.42
CFDP1-205ENST00000565646 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
CFDP1-205ENST00000565646 NRKQ7Z2Y5 1582 aa17.66■□□□□ 0.42
CFDP1-205ENST00000565646 A0A1W2PP64 1363 aa17.66■□□□□ 0.42
CFDP1-205ENST00000565646 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
CFDP1-205ENST00000565646 RGS12O14924 1447 aa17.65■□□□□ 0.42
CFDP1-205ENST00000565646 TRPM3Q9HCF6 1732 aaPredicted RBP17.65■□□□□ 0.42
CFDP1-205ENST00000565646 FOXO3O43524 673 aa17.65■□□□□ 0.42
CFDP1-205ENST00000565646 NGDNQ8NEJ9 315 aaKnown RBP17.64■□□□□ 0.41
CFDP1-205ENST00000565646 PXDNQ92626 1479 aa17.63■□□□□ 0.41
CFDP1-205ENST00000565646 USP6P35125 1406 aa17.63■□□□□ 0.41
CFDP1-205ENST00000565646 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
CFDP1-205ENST00000565646 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
CFDP1-205ENST00000565646 PANK3Q9H999 370 aa17.62■□□□□ 0.41
CFDP1-205ENST00000565646 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
CFDP1-205ENST00000565646 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
CFDP1-205ENST00000565646 XPCQ01831 940 aaPredicted RBP17.61■□□□□ 0.41
CFDP1-205ENST00000565646 ZNF692Q9BU19 519 aaPredicted RBP17.61■□□□□ 0.41
CFDP1-205ENST00000565646 KTN1Q86UP2 1357 aaKnown RBP17.61■□□□□ 0.41
CFDP1-205ENST00000565646 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
CFDP1-205ENST00000565646 USP21Q9UK80 565 aa17.6■□□□□ 0.41
CFDP1-205ENST00000565646 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
CFDP1-205ENST00000565646 ALS2Q96Q42 1657 aa17.59■□□□□ 0.41
CFDP1-205ENST00000565646 EDC4Q6P2E9 1401 aaKnown RBP17.59■□□□□ 0.41
CFDP1-205ENST00000565646 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
CFDP1-205ENST00000565646 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
CFDP1-205ENST00000565646 PER1O15534 1290 aaPredicted RBP17.58■□□□□ 0.4
CFDP1-205ENST00000565646 PSME1Q06323 249 aa17.58■□□□□ 0.4
CFDP1-205ENST00000565646 NSD3Q9BZ95 1437 aa17.57■□□□□ 0.4
CFDP1-205ENST00000565646 TRPC5Q9UL62 973 aaPredicted RBP17.57■□□□□ 0.4
CFDP1-205ENST00000565646 PIK3C2AO00443 1686 aa17.57■□□□□ 0.4
CFDP1-205ENST00000565646 SBNO1A3KN83 1393 aa17.56■□□□□ 0.4
CFDP1-205ENST00000565646 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
CFDP1-205ENST00000565646 MARF1Q9Y4F3 1742 aaKnown RBP17.56■□□□□ 0.4
CFDP1-205ENST00000565646 TTC21BQ7Z4L5 1316 aa17.56■□□□□ 0.4
CFDP1-205ENST00000565646 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
CFDP1-205ENST00000565646 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
CFDP1-205ENST00000565646 TNS3Q68CZ2 1445 aa17.54■□□□□ 0.4
CFDP1-205ENST00000565646 SPATA31A3Q5VYP0 1347 aa17.53■□□□□ 0.4
CFDP1-205ENST00000565646 USP54Q70EL1 1684 aa17.53■□□□□ 0.4
CFDP1-205ENST00000565646 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
CFDP1-205ENST00000565646 TTC21AQ8NDW8 1320 aa17.52■□□□□ 0.4
CFDP1-205ENST00000565646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.52■□□□□ 0.4
CFDP1-205ENST00000565646 PAK3O75914 559 aaPredicted RBP17.51■□□□□ 0.39
CFDP1-205ENST00000565646 AMER1Q5JTC6 1135 aaPredicted RBP17.51■□□□□ 0.39
CFDP1-205ENST00000565646 NME9Q86XW9 330 aa17.51■□□□□ 0.39
CFDP1-205ENST00000565646 ANKRD26Q9UPS8 1709 aa17.51■□□□□ 0.39
CFDP1-205ENST00000565646 CRYBG1Q9Y4K1 1723 aa17.51■□□□□ 0.39
CFDP1-205ENST00000565646 ATRNO75882 1429 aa17.5■□□□□ 0.39
CFDP1-205ENST00000565646 FYB1O15117 783 aa17.5■□□□□ 0.39
CFDP1-205ENST00000565646 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
CFDP1-205ENST00000565646 KNSTRNQ9Y448 316 aa17.49■□□□□ 0.39
CFDP1-205ENST00000565646 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
CFDP1-205ENST00000565646 OVOS2A0A0J9YW53 1432 aa17.48■□□□□ 0.39
CFDP1-205ENST00000565646 OVOS2Q6IE36 1432 aa17.48■□□□□ 0.39
CFDP1-205ENST00000565646 ABCA3Q99758 1704 aa17.48■□□□□ 0.39
CFDP1-205ENST00000565646 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
CFDP1-205ENST00000565646 NUTM2GQ5VZR2 741 aa17.47■□□□□ 0.39
CFDP1-205ENST00000565646 ABTB2Q8N961 1025 aa17.47■□□□□ 0.39
CFDP1-205ENST00000565646 GGNBP2Q9H3C7 697 aa17.47■□□□□ 0.39
CFDP1-205ENST00000565646 ARHGEF10O15013 1369 aa17.47■□□□□ 0.39
CFDP1-205ENST00000565646 NPC1L1Q9UHC9 1359 aa17.47■□□□□ 0.39
CFDP1-205ENST00000565646 PHRF1Q9P1Y6 1649 aaKnown RBP17.46■□□□□ 0.39
CFDP1-205ENST00000565646 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
CFDP1-205ENST00000565646 LMOD2Q6P5Q4 547 aa17.45■□□□□ 0.38
CFDP1-205ENST00000565646 CCDC125Q86Z20 511 aa17.45■□□□□ 0.38
CFDP1-205ENST00000565646 GJD4Q96KN9 370 aaPredicted RBP17.45■□□□□ 0.38
CFDP1-205ENST00000565646 USP19O94966 1318 aa17.45■□□□□ 0.38
CFDP1-205ENST00000565646 NSD2O96028 1365 aa17.44■□□□□ 0.38
CFDP1-205ENST00000565646 SLIT3O75094 1523 aa17.44■□□□□ 0.38
CFDP1-205ENST00000565646 NLRP6P59044 892 aa17.44■□□□□ 0.38
CFDP1-205ENST00000565646 CC2D1BQ5T0F9 858 aaKnown RBP17.42■□□□□ 0.38
CFDP1-205ENST00000565646 NLRP13Q86W25 1043 aa17.42■□□□□ 0.38
CFDP1-205ENST00000565646 CABLES1Q8TDN4 633 aa17.42■□□□□ 0.38
CFDP1-205ENST00000565646 BRWD3Q6RI45 1802 aa17.42■□□□□ 0.38
CFDP1-205ENST00000565646 NFAT5O94916 1531 aa17.42■□□□□ 0.38
CFDP1-205ENST00000565646 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.41■□□□□ 0.38
CFDP1-205ENST00000565646 EP400Q96L91 3159 aa17.41■□□□□ 0.38
CFDP1-205ENST00000565646 COG3Q96JB2 828 aa17.41■□□□□ 0.38
CFDP1-205ENST00000565646 MAP2P11137 1827 aaKnown RBP17.41■□□□□ 0.38
CFDP1-205ENST00000565646 SRCAPQ6ZRS2 3230 aa17.39■□□□□ 0.37
CFDP1-205ENST00000565646 UNC5CLQ8IV45 518 aa17.39■□□□□ 0.37
CFDP1-205ENST00000565646 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
CFDP1-205ENST00000565646 GCP02774 474 aa17.38■□□□□ 0.37
CFDP1-205ENST00000565646 FBLN1P23142 703 aa17.38■□□□□ 0.37
CFDP1-205ENST00000565646 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
CFDP1-205ENST00000565646 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
CFDP1-205ENST00000565646 LTN1O94822 1766 aa17.38■□□□□ 0.37
CFDP1-205ENST00000565646 MORC1Q86VD1 984 aa17.37■□□□□ 0.37
CFDP1-205ENST00000565646 GLI3P10071 1580 aa17.36■□□□□ 0.37
CFDP1-205ENST00000565646 HAP1P54257 671 aaPredicted RBP17.36■□□□□ 0.37
CFDP1-205ENST00000565646 SLIT2O94813 1529 aa17.35■□□□□ 0.37
CFDP1-205ENST00000565646 SOX12O15370 315 aa17.34■□□□□ 0.37
CFDP1-205ENST00000565646 COL18A1P39060 1754 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms