RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
CFDP1-205ENST00000565646 CCDC180Q9P1Z9 1646 aa26.8■■□□□ 1.88
CFDP1-205ENST00000565646 ABCC9O60706 1549 aa26.74■■□□□ 1.87
CFDP1-205ENST00000565646 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
CFDP1-205ENST00000565646 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
CFDP1-205ENST00000565646 DNAJC5BQ9UF47 199 aa25.31■■□□□ 1.64
CFDP1-205ENST00000565646 DCAF1Q9Y4B6 1507 aa25.13■■□□□ 1.61
CFDP1-205ENST00000565646 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
CFDP1-205ENST00000565646 NACADO15069 1562 aa25.08■■□□□ 1.61
CFDP1-205ENST00000565646 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
CFDP1-205ENST00000565646 PABPN1Q86U42 306 aaKnown RBP eCLIP24.87■■□□□ 1.57
CFDP1-205ENST00000565646 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
CFDP1-205ENST00000565646 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.52
CFDP1-205ENST00000565646 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
CFDP1-205ENST00000565646 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
CFDP1-205ENST00000565646 CC2D2AQ9P2K1 1620 aa24.14■■□□□ 1.46
CFDP1-205ENST00000565646 CECR2Q9BXF3 1484 aa24.09■■□□□ 1.45
CFDP1-205ENST00000565646 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
CFDP1-205ENST00000565646 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
CFDP1-205ENST00000565646 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
CFDP1-205ENST00000565646 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
CFDP1-205ENST00000565646 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
CFDP1-205ENST00000565646 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
CFDP1-205ENST00000565646 PEG3Q9GZU2 1588 aa23.24■■□□□ 1.31
CFDP1-205ENST00000565646 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
CFDP1-205ENST00000565646 WIZO95785 1651 aa23.2■■□□□ 1.3
CFDP1-205ENST00000565646 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
CFDP1-205ENST00000565646 NCAPD3P42695 1498 aa23.14■■□□□ 1.29
CFDP1-205ENST00000565646 CUX2O14529 1486 aa23.11■■□□□ 1.29
CFDP1-205ENST00000565646 ERCC6Q03468 1493 aa23.1■■□□□ 1.29
CFDP1-205ENST00000565646 HMGXB3Q12766 1538 aa23.08■■□□□ 1.28
CFDP1-205ENST00000565646 BAZ1BQ9UIG0 1483 aaKnown RBP23.03■■□□□ 1.28
CFDP1-205ENST00000565646 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
CFDP1-205ENST00000565646 TOP2AP11388 1531 aaKnown RBP22.94■■□□□ 1.26
CFDP1-205ENST00000565646 NESP48681 1621 aa22.89■■□□□ 1.25
CFDP1-205ENST00000565646 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
CFDP1-205ENST00000565646 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
CFDP1-205ENST00000565646 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
CFDP1-205ENST00000565646 KIF21AQ7Z4S6 1674 aa22.62■■□□□ 1.21
CFDP1-205ENST00000565646 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
CFDP1-205ENST00000565646 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
CFDP1-205ENST00000565646 CFTRP13569 1480 aa22.45■■□□□ 1.18
CFDP1-205ENST00000565646 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
CFDP1-205ENST00000565646 MRC2Q9UBG0 1479 aa22.35■■□□□ 1.17
CFDP1-205ENST00000565646 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
CFDP1-205ENST00000565646 WDR62O43379 1518 aa22.3■■□□□ 1.16
CFDP1-205ENST00000565646 CEP164Q9UPV0 1460 aa22.23■■□□□ 1.15
CFDP1-205ENST00000565646 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
CFDP1-205ENST00000565646 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
CFDP1-205ENST00000565646 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
CFDP1-205ENST00000565646 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
CFDP1-205ENST00000565646 CUX1P39880 1505 aa21.96■■□□□ 1.11
CFDP1-205ENST00000565646 TOPBP1Q92547 1522 aa21.94■■□□□ 1.1
CFDP1-205ENST00000565646 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
CFDP1-205ENST00000565646 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
CFDP1-205ENST00000565646 SYNJ1O43426 1573 aa21.89■■□□□ 1.09
CFDP1-205ENST00000565646 BIVM-ERCC5R4GMW8 1640 aa21.87■■□□□ 1.09
CFDP1-205ENST00000565646 TOP2BQ02880 1626 aa21.86■■□□□ 1.09
CFDP1-205ENST00000565646 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
CFDP1-205ENST00000565646 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
CFDP1-205ENST00000565646 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
CFDP1-205ENST00000565646 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
CFDP1-205ENST00000565646 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.08
CFDP1-205ENST00000565646 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
CFDP1-205ENST00000565646 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
CFDP1-205ENST00000565646 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
CFDP1-205ENST00000565646 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.06
CFDP1-205ENST00000565646 RAD54L2Q9Y4B4 1467 aa21.68■■□□□ 1.06
CFDP1-205ENST00000565646 ARHGEF11O15085 1522 aa21.67■■□□□ 1.06
CFDP1-205ENST00000565646 SOGA1O94964 1423 aa21.66■■□□□ 1.06
CFDP1-205ENST00000565646 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
CFDP1-205ENST00000565646 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
CFDP1-205ENST00000565646 CHD1O14646 1710 aa21.61■■□□□ 1.05
CFDP1-205ENST00000565646 CYB5RLQ6IPT4 315 aa21.6■■□□□ 1.05
CFDP1-205ENST00000565646 ABCA10Q8WWZ4 1543 aa21.59■■□□□ 1.05
CFDP1-205ENST00000565646 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.048e-9■□□□□ 9.4
CFDP1-205ENST00000565646 FBLN2P98095 1184 aa21.54■■□□□ 1.04
CFDP1-205ENST00000565646 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
CFDP1-205ENST00000565646 ABCA5Q8WWZ7 1642 aa21.49■■□□□ 1.03
CFDP1-205ENST00000565646 TRHP20396 242 aaPredicted RBP21.46■■□□□ 1.03
CFDP1-205ENST00000565646 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
CFDP1-205ENST00000565646 ARAP1Q96P48 1450 aa21.44■■□□□ 1.02
CFDP1-205ENST00000565646 RUSC2Q8N2Y8 1516 aa21.42■■□□□ 1.02
CFDP1-205ENST00000565646 PBRM1Q86U86 1689 aa21.41■■□□□ 1.02
CFDP1-205ENST00000565646 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
CFDP1-205ENST00000565646 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
CFDP1-205ENST00000565646 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
CFDP1-205ENST00000565646 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
CFDP1-205ENST00000565646 CHMP7Q8WUX9 453 aaPredicted RBP21.31■■□□□ 1
CFDP1-205ENST00000565646 IGF1RP08069 1367 aa21.31■■□□□ 1
CFDP1-205ENST00000565646 CLASP1Q7Z460 1538 aa21.27■■□□□ 1
CFDP1-205ENST00000565646 EEA1Q15075 1411 aa21.27■■□□□ 1
CFDP1-205ENST00000565646 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
CFDP1-205ENST00000565646 ADAMTS12P58397 1594 aa21.24■□□□□ 0.99
CFDP1-205ENST00000565646 CUL7Q14999 1698 aa21.22■□□□□ 0.99
CFDP1-205ENST00000565646 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
CFDP1-205ENST00000565646 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
CFDP1-205ENST00000565646 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
CFDP1-205ENST00000565646 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
CFDP1-205ENST00000565646 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms