RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 NRXN3Q9Y4C0 1643 aa12.44□□□□□ -0.42
HERC2-203ENST00000563670 METP08581 1390 aa12.43□□□□□ -0.42
HERC2-203ENST00000563670 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
HERC2-203ENST00000563670 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
HERC2-203ENST00000563670 KIF1BO60333 1816 aa12.42□□□□□ -0.42
HERC2-203ENST00000563670 LRPPRCP42704 1394 aaKnown RBP12.42□□□□□ -0.42
HERC2-203ENST00000563670 MAP3K5Q99683 1374 aa12.41□□□□□ -0.42
HERC2-203ENST00000563670 SPATA31A3Q5VYP0 1347 aa12.4□□□□□ -0.42
HERC2-203ENST00000563670 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
HERC2-203ENST00000563670 TNS4Q8IZW8 715 aa12.4□□□□□ -0.42
HERC2-203ENST00000563670 FOXO3O43524 673 aa12.39□□□□□ -0.43
HERC2-203ENST00000563670 NRAPQ86VF7 1730 aa12.38□□□□□ -0.43
HERC2-203ENST00000563670 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
HERC2-203ENST00000563670 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
HERC2-203ENST00000563670 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
HERC2-203ENST00000563670 DNAJC5GQ8N7S2 189 aa12.37□□□□□ -0.43
HERC2-203ENST00000563670 PRAG1Q86YV5 1406 aa12.37□□□□□ -0.43
HERC2-203ENST00000563670 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
HERC2-203ENST00000563670 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
HERC2-203ENST00000563670 GOLGB1Q14789 3259 aaKnown RBP12.35□□□□□ -0.43
HERC2-203ENST00000563670 ZBTB7AO95365 584 aa12.35□□□□□ -0.43
HERC2-203ENST00000563670 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
HERC2-203ENST00000563670 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
HERC2-203ENST00000563670 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
HERC2-203ENST00000563670 CLTCL1P53675 1640 aa12.34□□□□□ -0.43
HERC2-203ENST00000563670 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
HERC2-203ENST00000563670 GPR162Q16538 588 aa12.34□□□□□ -0.43
HERC2-203ENST00000563670 ZNF326Q5BKZ1 582 aaKnown RBP12.34□□□□□ -0.43
HERC2-203ENST00000563670 PDGFDQ9GZP0 370 aaPredicted RBP12.34□□□□□ -0.43
HERC2-203ENST00000563670 APLP1P51693 650 aa12.33□□□□□ -0.44
HERC2-203ENST00000563670 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
HERC2-203ENST00000563670 CDC42BPGQ6DT37 1551 aa12.33□□□□□ -0.44
HERC2-203ENST00000563670 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
HERC2-203ENST00000563670 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
HERC2-203ENST00000563670 RGPD3A6NKT7 1758 aaPredicted RBP12.31□□□□□ -0.44
HERC2-203ENST00000563670 RGPD4Q7Z3J3 1758 aa12.31□□□□□ -0.44
HERC2-203ENST00000563670 TNS3Q68CZ2 1445 aa12.3□□□□□ -0.44
HERC2-203ENST00000563670 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
HERC2-203ENST00000563670 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
HERC2-203ENST00000563670 ABCA3Q99758 1704 aa12.3□□□□□ -0.44
HERC2-203ENST00000563670 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
HERC2-203ENST00000563670 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
HERC2-203ENST00000563670 MTFR1LQ9H019 292 aa12.29□□□□□ -0.44
HERC2-203ENST00000563670 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
HERC2-203ENST00000563670 DHX57Q6P158 1386 aaKnown RBP12.29□□□□□ -0.44
HERC2-203ENST00000563670 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
HERC2-203ENST00000563670 JMYQ8N9B5 988 aa12.28□□□□□ -0.44
HERC2-203ENST00000563670 ARXQ96QS3 562 aa12.28□□□□□ -0.44
HERC2-203ENST00000563670 PLSCR1O15162 318 aa12.27□□□□□ -0.45
HERC2-203ENST00000563670 RGL3Q3MIN7 710 aa12.27□□□□□ -0.45
HERC2-203ENST00000563670 COL14A1Q05707 1796 aaKnown RBP12.26□□□□□ -0.45
HERC2-203ENST00000563670 KRT28Q7Z3Y7 464 aa12.26□□□□□ -0.45
HERC2-203ENST00000563670 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
HERC2-203ENST00000563670 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
HERC2-203ENST00000563670 PPLO60437 1756 aa12.25□□□□□ -0.45
HERC2-203ENST00000563670 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
HERC2-203ENST00000563670 SPATA31A1Q5TZJ5 1347 aa12.25□□□□□ -0.45
HERC2-203ENST00000563670 KIF1AQ12756 1690 aa12.25□□□□□ -0.45
HERC2-203ENST00000563670 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
HERC2-203ENST00000563670 ADCY9O60503 1353 aa12.24□□□□□ -0.45
HERC2-203ENST00000563670 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
HERC2-203ENST00000563670 WWC3Q9ULE0 1092 aa12.24□□□□□ -0.45
HERC2-203ENST00000563670 C11orf95C9JLR9 678 aaPredicted RBP12.23□□□□□ -0.45
HERC2-203ENST00000563670 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
HERC2-203ENST00000563670 GRIN3BO60391 1043 aa12.23□□□□□ -0.45
HERC2-203ENST00000563670 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
HERC2-203ENST00000563670 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
HERC2-203ENST00000563670 CCER1Q8TC90 406 aaPredicted RBP12.22□□□□□ -0.45
HERC2-203ENST00000563670 IFT172Q9UG01 1749 aa12.22□□□□□ -0.45
HERC2-203ENST00000563670 SPATA31E1Q6ZUB1 1445 aa12.21□□□□□ -0.45
HERC2-203ENST00000563670 PSME1Q06323 249 aa12.21□□□□□ -0.45
HERC2-203ENST00000563670 KLRG1Q96E93 195 aa12.21□□□□□ -0.45
HERC2-203ENST00000563670 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.45
HERC2-203ENST00000563670 BARGINQ6ZT62 677 aa12.2□□□□□ -0.46
HERC2-203ENST00000563670 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
HERC2-203ENST00000563670 KIF3CO14782 793 aa12.19□□□□□ -0.46
HERC2-203ENST00000563670 POLA2Q14181 598 aa12.19□□□□□ -0.46
HERC2-203ENST00000563670 SLC15A2Q16348 729 aa12.19□□□□□ -0.46
HERC2-203ENST00000563670 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
HERC2-203ENST00000563670 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
HERC2-203ENST00000563670 PCNTO95613 3336 aa12.19□□□□□ -0.46
HERC2-203ENST00000563670 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
HERC2-203ENST00000563670 PROM2Q8N271 834 aa12.18□□□□□ -0.46
HERC2-203ENST00000563670 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
HERC2-203ENST00000563670 STK32BQ9NY57 414 aa12.18□□□□□ -0.46
HERC2-203ENST00000563670 CLSPNQ9HAW4 1339 aa12.17□□□□□ -0.46
HERC2-203ENST00000563670 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
HERC2-203ENST00000563670 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
HERC2-203ENST00000563670 YBX3P16989 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
HERC2-203ENST00000563670 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
HERC2-203ENST00000563670 TECPR2O15040 1411 aa12.15□□□□□ -0.46
HERC2-203ENST00000563670 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
HERC2-203ENST00000563670 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
HERC2-203ENST00000563670 ADGRF5Q8IZF2 1346 aa12.14□□□□□ -0.47
HERC2-203ENST00000563670 NUTM2FA1L443 756 aa12.14□□□□□ -0.47
HERC2-203ENST00000563670 ZNF526Q8TF50 670 aaPredicted RBP12.14□□□□□ -0.47
HERC2-203ENST00000563670 OVOS2A0A0G2JMS6 1433 aa12.13□□□□□ -0.47
HERC2-203ENST00000563670 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
HERC2-203ENST00000563670 TNS2Q63HR2 1409 aa12.13□□□□□ -0.47
HERC2-203ENST00000563670 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms