RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 DNAJC5GQ8N7S2 189 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 PRDM10Q9NQV6 1147 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 ADGRB1O14514 1584 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 XRN1Q8IZH2 1706 aaKnown RBP5.78□□□□□ -1.48
ZEB1-212ENST00000558655 TONSLQ96HA7 1378 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 MLLT1Q03111 559 aaPredicted RBP5.78□□□□□ -1.48
ZEB1-212ENST00000558655 COL13A1Q5TAT6 717 aaPredicted RBP5.78□□□□□ -1.48
ZEB1-212ENST00000558655 SIN3AQ96ST3 1273 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 TNS1Q9HBL0 1735 aaKnown RBP5.78□□□□□ -1.48
ZEB1-212ENST00000558655 ASXL1Q8IXJ9 1541 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 MSH6P52701 1360 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 PLEKHG1Q9ULL1 1385 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 ARHGEF28Q8N1W1 1705 aaKnown RBP5.78□□□□□ -1.48
ZEB1-212ENST00000558655 CASZ1Q86V15 1759 aa5.78□□□□□ -1.48
ZEB1-212ENST00000558655 FNBP4Q8N3X1 1017 aaPredicted RBP5.78□□□□□ -1.48
ZEB1-212ENST00000558655 CAMTA1Q9Y6Y1 1673 aa5.77□□□□□ -1.49
ZEB1-212ENST00000558655 PPP1R15AO75807 674 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-212ENST00000558655 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.77□□□□□ -1.49
ZEB1-212ENST00000558655 YTHDC1Q96MU7 727 aaKnown RBP5.77□□□□□ -1.49
ZEB1-212ENST00000558655 ARID3AQ99856 593 aa5.77□□□□□ -1.49
ZEB1-212ENST00000558655 USP32Q8NFA0 1604 aa5.76□□□□□ -1.49
ZEB1-212ENST00000558655 BRWD3Q6RI45 1802 aa5.76□□□□□ -1.49
ZEB1-212ENST00000558655 HSP90B1P14625 803 aaKnown RBP5.76□□□□□ -1.49
ZEB1-212ENST00000558655 DIEXFQ68CQ4 756 aaKnown RBP5.76□□□□□ -1.49
ZEB1-212ENST00000558655 L3MBTL2Q969R5 705 aa5.76□□□□□ -1.49
ZEB1-212ENST00000558655 KCNQ2O43526 872 aa5.76□□□□□ -1.49
ZEB1-212ENST00000558655 NECTIN2Q92692 538 aa5.76□□□□□ -1.49
ZEB1-212ENST00000558655 NUP188Q5SRE5 1749 aa5.76□□□□□ -1.49
ZEB1-212ENST00000558655 TECPR2O15040 1411 aa5.76□□□□□ -1.49
ZEB1-212ENST00000558655 ADAMTS13Q76LX8 1427 aa5.76□□□□□ -1.49
ZEB1-212ENST00000558655 KLRG1Q96E93 195 aa5.75□□□□□ -1.49
ZEB1-212ENST00000558655 PIK3R4Q99570 1358 aa5.75□□□□□ -1.49
ZEB1-212ENST00000558655 C10orf71Q711Q0 1435 aa5.75□□□□□ -1.49
ZEB1-212ENST00000558655 HDGFP51858 240 aaKnown RBP5.75□□□□□ -1.49
ZEB1-212ENST00000558655 VGFO15240 615 aaPredicted RBP5.74□□□□□ -1.49
ZEB1-212ENST00000558655 NEUROD1Q13562 356 aa5.74□□□□□ -1.49
ZEB1-212ENST00000558655 USP19O94966 1318 aa5.74□□□□□ -1.49
ZEB1-212ENST00000558655 TAF7LQ5H9L4 462 aa5.74□□□□□ -1.49
ZEB1-212ENST00000558655 COL24A1Q17RW2 1714 aa5.74□□□□□ -1.49
ZEB1-212ENST00000558655 QRICH2Q9H0J4 1663 aa5.74□□□□□ -1.49
ZEB1-212ENST00000558655 C14orf93Q9H972 538 aaKnown RBP5.73□□□□□ -1.49
ZEB1-212ENST00000558655 PPP1R1BQ9UD71 204 aaPredicted RBP5.73□□□□□ -1.49
ZEB1-212ENST00000558655 ADGRF5Q8IZF2 1346 aa5.73□□□□□ -1.49
ZEB1-212ENST00000558655 C11orf95C9JLR9 678 aaPredicted RBP5.72□□□□□ -1.49
ZEB1-212ENST00000558655 NBPF8Q3BBV2 869 aa5.72□□□□□ -1.49
ZEB1-212ENST00000558655 SIRT1Q96EB6 747 aa5.72□□□□□ -1.49
ZEB1-212ENST00000558655 NWD2Q9ULI1 1742 aa5.72□□□□□ -1.49
ZEB1-212ENST00000558655 LRPPRCP42704 1394 aaKnown RBP5.72□□□□□ -1.49
ZEB1-212ENST00000558655 SBNO2Q9Y2G9 1366 aa5.72□□□□□ -1.49
ZEB1-212ENST00000558655 KCNA6P17658 529 aa5.72□□□□□ -1.49
ZEB1-212ENST00000558655 DCAF11Q8TEB1 546 aa5.72□□□□□ -1.49
ZEB1-212ENST00000558655 TBX22Q9Y458 520 aa5.72□□□□□ -1.49
ZEB1-212ENST00000558655 LTKP29376 864 aa5.71□□□□□ -1.5
ZEB1-212ENST00000558655 NBPF14Q5TI25 921 aa5.71□□□□□ -1.5
ZEB1-212ENST00000558655 EID1Q9Y6B2 187 aa5.71□□□□□ -1.5
ZEB1-212ENST00000558655 ABCC11Q96J66 1382 aa5.71□□□□□ -1.5
ZEB1-212ENST00000558655 HMGB1P09429 215 aaKnown RBP5.71□□□□□ -1.5
ZEB1-212ENST00000558655 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-212ENST00000558655 SLAIN2Q9P270 581 aa5.71□□□□□ -1.5
ZEB1-212ENST00000558655 NRKQ7Z2Y5 1582 aa5.71□□□□□ -1.5
ZEB1-212ENST00000558655 ZNF326Q5BKZ1 582 aaKnown RBP5.7□□□□□ -1.5
ZEB1-212ENST00000558655 YTHDC2Q9H6S0 1430 aaKnown RBP5.7□□□□□ -1.5
ZEB1-212ENST00000558655 STAG3Q9UJ98 1225 aa5.7□□□□□ -1.5
ZEB1-212ENST00000558655 ADCY9O60503 1353 aa5.7□□□□□ -1.5
ZEB1-212ENST00000558655 ONECUT3O60422 494 aaPredicted RBP5.7□□□□□ -1.5
ZEB1-212ENST00000558655 TXNDC2Q86VQ3 553 aa5.7□□□□□ -1.5
ZEB1-212ENST00000558655 TOPAZ1Q8N9V7 1692 aa5.7□□□□□ -1.5
ZEB1-212ENST00000558655 NALCNQ8IZF0 1738 aa5.7□□□□□ -1.5
ZEB1-212ENST00000558655 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.7□□□□□ -1.5
ZEB1-212ENST00000558655 PTPRUQ92729 1446 aa5.69□□□□□ -1.5
ZEB1-212ENST00000558655 RGL3Q3MIN7 710 aa5.69□□□□□ -1.5
ZEB1-212ENST00000558655 PRPF38BQ5VTL8 546 aaKnown RBP5.69□□□□□ -1.5
ZEB1-212ENST00000558655 LRRC59Q96AG4 307 aaKnown RBP5.69□□□□□ -1.5
ZEB1-212ENST00000558655 PUS7Q96PZ0 661 aaKnown RBP5.69□□□□□ -1.5
ZEB1-212ENST00000558655 BCL11BQ9C0K0 894 aaPredicted RBP5.69□□□□□ -1.5
ZEB1-212ENST00000558655 C1orf115Q9H7X2 142 aa5.69□□□□□ -1.5
ZEB1-212ENST00000558655 TMEM94Q12767 1356 aa5.69□□□□□ -1.5
ZEB1-212ENST00000558655 FMN2Q9NZ56 1722 aa5.69□□□□□ -1.5
ZEB1-212ENST00000558655 CDC42BPGQ6DT37 1551 aa5.69□□□□□ -1.5
ZEB1-212ENST00000558655 ITSN1Q15811 1721 aa5.69□□□□□ -1.5
ZEB1-212ENST00000558655 CHGAP10645 457 aaKnown RBP5.69□□□□□ -1.5
ZEB1-212ENST00000558655 BBXQ8WY36 941 aaPredicted RBP5.69□□□□□ -1.5
ZEB1-212ENST00000558655 MIER1Q8N108 512 aa5.68□□□□□ -1.5
ZEB1-212ENST00000558655 ROCK2O75116 1388 aaKnown RBP5.68□□□□□ -1.5
ZEB1-212ENST00000558655 METP08581 1390 aa5.68□□□□□ -1.5
ZEB1-212ENST00000558655 EIF3AQ14152 1382 aaKnown RBP5.68□□□□□ -1.5
ZEB1-212ENST00000558655 PNPLA6Q8IY17 1366 aa5.68□□□□□ -1.5
ZEB1-212ENST00000558655 MYOM1P52179 1685 aa5.68□□□□□ -1.5
ZEB1-212ENST00000558655 ZBTB7CA1YPR0 619 aa5.68□□□□□ -1.5
ZEB1-212ENST00000558655 ZNF316A6NFI3 1004 aaPredicted RBP5.68□□□□□ -1.5
ZEB1-212ENST00000558655 NEFLP07196 543 aa5.68□□□□□ -1.5
ZEB1-212ENST00000558655 SPDYE4A6NLX3 237 aa5.67□□□□□ -1.5
ZEB1-212ENST00000558655 GRIN3BO60391 1043 aa5.67□□□□□ -1.5
ZEB1-212ENST00000558655 BRPF1P55201 1214 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-212ENST00000558655 FSTL1Q12841 308 aa5.67□□□□□ -1.5
ZEB1-212ENST00000558655 TULP4Q9NRJ4 1543 aa5.67□□□□□ -1.5
ZEB1-212ENST00000558655 GLI3P10071 1580 aa5.67□□□□□ -1.5
ZEB1-212ENST00000558655 USP47Q96K76 1375 aa5.67□□□□□ -1.5
ZEB1-212ENST00000558655 CFAP70Q5T0N1 1121 aa5.67□□□□□ -1.5
ZEB1-212ENST00000558655 ZNF428Q96B54 188 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms