RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 PDCL3Q9H2J4 239 aa6.37□□□□□ -1.39
HMG20A-204ENST00000558288 CCDC9Q9Y3X0 531 aaKnown RBP6.37□□□□□ -1.39
HMG20A-204ENST00000558288 MSNP26038 577 aaKnown RBP6.37□□□□□ -1.39
HMG20A-204ENST00000558288 NLRP1Q9C000 1473 aa6.37□□□□□ -1.39
HMG20A-204ENST00000558288 RRP7AQ9Y3A4 280 aaKnown RBP6.37□□□□□ -1.39
HMG20A-204ENST00000558288 PCDHB15Q9Y5E8 787 aa6.37□□□□□ -1.39
HMG20A-204ENST00000558288 VIRMAQ69YN4 1812 aaKnown RBP6.36□□□□□ -1.39
HMG20A-204ENST00000558288 RTEL1-TNFRSF6BF6WH68 1400 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 TNNQ9UQP3 1299 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 KDM5DQ9BY66 1539 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 ADGRL2O95490 1459 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 KCNA6P17658 529 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 TRMT2AQ8IZ69 625 aaKnown RBP6.36□□□□□ -1.39
HMG20A-204ENST00000558288 NGLY1Q96IV0 654 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 GBP4Q96PP9 640 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 STK26Q9P289 416 aa6.36□□□□□ -1.39
HMG20A-204ENST00000558288 LTBP4Q8N2S1 1624 aa6.35□□□□□ -1.39
HMG20A-204ENST00000558288 MYO3AQ8NEV4 1616 aa6.35□□□□□ -1.39
HMG20A-204ENST00000558288 PLA2R1Q13018 1463 aa6.35□□□□□ -1.39
HMG20A-204ENST00000558288 AMER1Q5JTC6 1135 aaPredicted RBP6.35□□□□□ -1.39
HMG20A-204ENST00000558288 POTEAQ6S8J7 498 aa6.35□□□□□ -1.39
HMG20A-204ENST00000558288 FTSJ3Q8IY81 847 aaKnown RBP6.35□□□□□ -1.39
HMG20A-204ENST00000558288 TRPM1Q7Z4N2 1603 aa6.35□□□□□ -1.39
HMG20A-204ENST00000558288 TNNT2P45379 298 aaPredicted RBP6.35□□□□□ -1.39
HMG20A-204ENST00000558288 GAS2L3Q86XJ1 694 aa6.35□□□□□ -1.39
HMG20A-204ENST00000558288 DDX17Q92841 729 aaKnown RBP6.35□□□□□ -1.39
HMG20A-204ENST00000558288 ISY1Q9ULR0 285 aaKnown RBP6.35□□□□□ -1.39
HMG20A-204ENST00000558288 SCAF11Q99590 1463 aaKnown RBP6.35□□□□□ -1.39
HMG20A-204ENST00000558288 RLBP1P12271 317 aa6.34□□□□□ -1.39
HMG20A-204ENST00000558288 CDCA8Q53HL2 280 aa6.34□□□□□ -1.39
HMG20A-204ENST00000558288 TNPO1Q92973 898 aaKnown RBP6.34□□□□□ -1.39
HMG20A-204ENST00000558288 SLC52A1Q9NWF4 448 aa6.34□□□□□ -1.39
HMG20A-204ENST00000558288 NINLQ9Y2I6 1382 aa6.34□□□□□ -1.39
HMG20A-204ENST00000558288 NCLP19338 710 aaKnown RBP6.34□□□□□ -1.39
HMG20A-204ENST00000558288 NASPP49321 788 aaPredicted RBP6.34□□□□□ -1.39
HMG20A-204ENST00000558288 XPCQ01831 940 aaPredicted RBP6.34□□□□□ -1.39
HMG20A-204ENST00000558288 AMOTL2Q9Y2J4 779 aa6.34□□□□□ -1.39
HMG20A-204ENST00000558288 CADPS2Q86UW7 1296 aa6.34□□□□□ -1.39
HMG20A-204ENST00000558288 WWC1Q8IX03 1113 aa6.34□□□□□ -1.39
HMG20A-204ENST00000558288 R3HCC1Q9Y3T6 440 aaKnown RBP6.34□□□□□ -1.39
HMG20A-204ENST00000558288 CCDC173Q0VFZ6 552 aa6.33□□□□□ -1.4
HMG20A-204ENST00000558288 SAFB2Q14151 953 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMG20A-204ENST00000558288 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMG20A-204ENST00000558288 SRCAPQ6ZRS2 3230 aa6.33□□□□□ -1.4
HMG20A-204ENST00000558288 TMEM2Q9UHN6 1383 aa6.33□□□□□ -1.4
HMG20A-204ENST00000558288 GOLGA6L22H0YM25 854 aa6.33□□□□□ -1.4
HMG20A-204ENST00000558288 RARSP54136 660 aaKnown RBP6.33□□□□□ -1.4
HMG20A-204ENST00000558288 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-204ENST00000558288 A0A0U1RQG5 324 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-204ENST00000558288 SKOR2Q2VWA4 1001 aaPredicted RBP6.33□□□□□ -1.4
HMG20A-204ENST00000558288 ZSCAN30Q86W11 494 aa6.33□□□□□ -1.4
HMG20A-204ENST00000558288 GPRASP1Q5JY77 1395 aa6.33□□□□□ -1.4
HMG20A-204ENST00000558288 REREQ9P2R6 1566 aa6.33□□□□□ -1.4
HMG20A-204ENST00000558288 RXRBP28702 533 aa6.32□□□□□ -1.4
HMG20A-204ENST00000558288 ERVK-7P63135 1459 aa6.32□□□□□ -1.4
HMG20A-204ENST00000558288 INO80Q9ULG1 1556 aaPredicted RBP6.32□□□□□ -1.4
HMG20A-204ENST00000558288 CROCC2H7BZ55 1655 aa6.32□□□□□ -1.4
HMG20A-204ENST00000558288 CPS1P31327 1500 aa6.32□□□□□ -1.4
HMG20A-204ENST00000558288 DDX49Q9Y6V7 483 aaKnown RBP6.32□□□□□ -1.4
HMG20A-204ENST00000558288 ITPRIPQ8IWB1 547 aa6.32□□□□□ -1.4
HMG20A-204ENST00000558288 PRDM15P57071 1507 aaPredicted RBP6.32□□□□□ -1.4
HMG20A-204ENST00000558288 PIK3C2GO75747 1445 aa6.32□□□□□ -1.4
HMG20A-204ENST00000558288 ZBTB7CA1YPR0 619 aa6.31□□□□□ -1.4
HMG20A-204ENST00000558288 CALD1Q05682 793 aaKnown RBP6.31□□□□□ -1.4
HMG20A-204ENST00000558288 C19orf44Q9H6X5 657 aa6.31□□□□□ -1.4
HMG20A-204ENST00000558288 ASXL1Q8IXJ9 1541 aa6.31□□□□□ -1.4
HMG20A-204ENST00000558288 AAMPQ13685 434 aa6.31□□□□□ -1.4
HMG20A-204ENST00000558288 MED1Q15648 1581 aaPredicted RBP6.31□□□□□ -1.4
HMG20A-204ENST00000558288 OFD1O75665 1012 aa6.31□□□□□ -1.4
HMG20A-204ENST00000558288 PTMSP20962 102 aa6.31□□□□□ -1.4
HMG20A-204ENST00000558288 MVPQ14764 893 aaKnown RBP6.31□□□□□ -1.4
HMG20A-204ENST00000558288 ZNF772Q68DY9 489 aaPredicted RBP6.31□□□□□ -1.4
HMG20A-204ENST00000558288 LRRC7Q96NW7 1537 aa6.3□□□□□ -1.4
HMG20A-204ENST00000558288 ESCO1Q5FWF5 840 aa6.3□□□□□ -1.4
HMG20A-204ENST00000558288 ZKSCAN2Q63HK3 967 aa6.3□□□□□ -1.4
HMG20A-204ENST00000558288 DZIP1LQ8IYY4 767 aaKnown RBP6.3□□□□□ -1.4
HMG20A-204ENST00000558288 TCP11L2Q8N4U5 519 aa6.3□□□□□ -1.4
HMG20A-204ENST00000558288 NGEFQ8N5V2 710 aa6.3□□□□□ -1.4
HMG20A-204ENST00000558288 ZNF692Q9BU19 519 aaPredicted RBP6.3□□□□□ -1.4
HMG20A-204ENST00000558288 ABCC3O15438 1527 aa6.3□□□□□ -1.4
HMG20A-204ENST00000558288 UQCRHLA0A096LP55 91 aa6.3□□□□□ -1.4
HMG20A-204ENST00000558288 UQCRHP07919 91 aa6.3□□□□□ -1.4
HMG20A-204ENST00000558288 QTRT2Q9H974 415 aaKnown RBP6.3□□□□□ -1.4
HMG20A-204ENST00000558288 SSFA2P28290 1259 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 RAB3GAP1Q15042 981 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 LNPKQ9C0E8 428 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 PRDM10Q9NQV6 1147 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 SMC4Q9NTJ3 1288 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 RIMS2Q9UQ26 1411 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 IQSEC2Q5JU85 1478 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 DUOX2Q9NRD8 1548 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 CIZ1Q9ULV3 898 aaPredicted RBP6.29□□□□□ -1.4
HMG20A-204ENST00000558288 RIPK4P57078 832 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 RUNDC1Q96C34 613 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 MAP7D2Q96T17 732 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 RGS17Q9UGC6 210 aaPredicted RBP6.29□□□□□ -1.4
HMG20A-204ENST00000558288 AFF2P51816 1311 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 JCADQ9P266 1359 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms