RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 COL3A1P02461 1466 aaPredicted RBP13.72□□□□□ -0.21
TPM1-210ENST00000558264 MYT1Q01538 1121 aa13.72□□□□□ -0.21
TPM1-210ENST00000558264 PLEKHF1Q96S99 279 aa13.72□□□□□ -0.21
TPM1-210ENST00000558264 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
TPM1-210ENST00000558264 PRR36Q9H6K5 1346 aa13.71□□□□□ -0.21
TPM1-210ENST00000558264 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.21
TPM1-210ENST00000558264 NPM2Q86SE8 214 aaKnown RBP13.71□□□□□ -0.21
TPM1-210ENST00000558264 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.21
TPM1-210ENST00000558264 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
TPM1-210ENST00000558264 COG6Q9Y2V7 657 aa13.71□□□□□ -0.21
TPM1-210ENST00000558264 HMOX1P09601 288 aa13.71□□□□□ -0.22
TPM1-210ENST00000558264 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
TPM1-210ENST00000558264 RRS1Q15050 365 aaKnown RBP13.7□□□□□ -0.22
TPM1-210ENST00000558264 WDR63Q8IWG1 891 aa13.7□□□□□ -0.22
TPM1-210ENST00000558264 ADAMTS13Q76LX8 1427 aa13.7□□□□□ -0.22
TPM1-210ENST00000558264 KIF20BQ96Q89 1820 aa13.7□□□□□ -0.22
TPM1-210ENST00000558264 RARSP54136 660 aaKnown RBP13.69□□□□□ -0.22
TPM1-210ENST00000558264 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
TPM1-210ENST00000558264 ATP7BP35670 1465 aa13.69□□□□□ -0.22
TPM1-210ENST00000558264 ANKRD26Q9UPS8 1709 aa13.69□□□□□ -0.22
TPM1-210ENST00000558264 TRIM35Q9UPQ4 493 aa13.69□□□□□ -0.22
TPM1-210ENST00000558264 CCDC61Q9Y6R9 512 aa13.69□□□□□ -0.22
TPM1-210ENST00000558264 RIPK4P57078 832 aa13.68□□□□□ -0.22
TPM1-210ENST00000558264 MED14O60244 1454 aa13.68□□□□□ -0.22
TPM1-210ENST00000558264 KDM2BQ8NHM5 1336 aa13.68□□□□□ -0.22
TPM1-210ENST00000558264 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
TPM1-210ENST00000558264 SOX12O15370 315 aa13.68□□□□□ -0.22
TPM1-210ENST00000558264 CPS1P31327 1500 aa13.68□□□□□ -0.22
TPM1-210ENST00000558264 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
TPM1-210ENST00000558264 CCDC27Q2M243 656 aa13.67□□□□□ -0.22
TPM1-210ENST00000558264 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
TPM1-210ENST00000558264 PDE4AP27815 886 aa13.67□□□□□ -0.22
TPM1-210ENST00000558264 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
TPM1-210ENST00000558264 RLBP1P12271 317 aa13.67□□□□□ -0.22
TPM1-210ENST00000558264 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
TPM1-210ENST00000558264 EID1Q9Y6B2 187 aa13.67□□□□□ -0.22
TPM1-210ENST00000558264 RGS3P49796 1198 aa13.66□□□□□ -0.22
TPM1-210ENST00000558264 EXOSC9Q06265 439 aaKnown RBP13.66□□□□□ -0.22
TPM1-210ENST00000558264 EDC4Q6P2E9 1401 aaKnown RBP13.66□□□□□ -0.22
TPM1-210ENST00000558264 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
TPM1-210ENST00000558264 COG3Q96JB2 828 aa13.66□□□□□ -0.22
TPM1-210ENST00000558264 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
TPM1-210ENST00000558264 LAS1LQ9Y4W2 734 aaKnown RBP13.66□□□□□ -0.22
TPM1-210ENST00000558264 FAM135BQ49AJ0 1406 aa13.66□□□□□ -0.22
TPM1-210ENST00000558264 PTPRUQ92729 1446 aa13.66□□□□□ -0.22
TPM1-210ENST00000558264 PNPLA6Q8IY17 1366 aa13.65□□□□□ -0.22
TPM1-210ENST00000558264 TECPR2O15040 1411 aa13.65□□□□□ -0.22
TPM1-210ENST00000558264 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
TPM1-210ENST00000558264 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
TPM1-210ENST00000558264 IGHDP01880 384 aa13.65□□□□□ -0.22
TPM1-210ENST00000558264 AMOTL2Q9Y2J4 779 aa13.65□□□□□ -0.22
TPM1-210ENST00000558264 PLEKHG1Q9ULL1 1385 aa13.64□□□□□ -0.23
TPM1-210ENST00000558264 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
TPM1-210ENST00000558264 C3P01024 1663 aa13.64□□□□□ -0.23
TPM1-210ENST00000558264 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
TPM1-210ENST00000558264 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
TPM1-210ENST00000558264 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
TPM1-210ENST00000558264 ACEP12821 1306 aa13.63□□□□□ -0.23
TPM1-210ENST00000558264 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.63□□□□□ -0.23
TPM1-210ENST00000558264 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
TPM1-210ENST00000558264 CDC42BPGQ6DT37 1551 aa13.63□□□□□ -0.23
TPM1-210ENST00000558264 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
TPM1-210ENST00000558264 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
TPM1-210ENST00000558264 PDE3AQ14432 1141 aa13.62□□□□□ -0.23
TPM1-210ENST00000558264 BACH2Q9BYV9 841 aa13.62□□□□□ -0.23
TPM1-210ENST00000558264 SIRT1Q96EB6 747 aa13.61□□□□□ -0.23
TPM1-210ENST00000558264 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
TPM1-210ENST00000558264 FCHSD2O94868 740 aa13.61□□□□□ -0.23
TPM1-210ENST00000558264 IL13P35225 146 aa13.61□□□□□ -0.23
TPM1-210ENST00000558264 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
TPM1-210ENST00000558264 FER1L4A9Z1Z3 1794 aa13.61□□□□□ -0.23
TPM1-210ENST00000558264 NEFMP07197 916 aa13.6□□□□□ -0.23
TPM1-210ENST00000558264 MS4A1P11836 297 aa13.6□□□□□ -0.23
TPM1-210ENST00000558264 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
TPM1-210ENST00000558264 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
TPM1-210ENST00000558264 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.23
TPM1-210ENST00000558264 FAM83GA6ND36 823 aa13.58□□□□□ -0.24
TPM1-210ENST00000558264 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
TPM1-210ENST00000558264 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
TPM1-210ENST00000558264 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
TPM1-210ENST00000558264 NOP58Q9Y2X3 529 aaKnown RBP13.58□□□□□ -0.24
TPM1-210ENST00000558264 PCDHB15Q9Y5E8 787 aa13.58□□□□□ -0.24
TPM1-210ENST00000558264 ITSN1Q15811 1721 aa13.58□□□□□ -0.24
TPM1-210ENST00000558264 MON2Q7Z3U7 1717 aa13.58□□□□□ -0.24
TPM1-210ENST00000558264 ELL2O00472 640 aaPredicted RBP13.57□□□□□ -0.24
TPM1-210ENST00000558264 DCTN1Q14203 1278 aa13.57□□□□□ -0.24
TPM1-210ENST00000558264 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
TPM1-210ENST00000558264 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
TPM1-210ENST00000558264 KCNA6P17658 529 aa13.57□□□□□ -0.24
TPM1-210ENST00000558264 NFE2L2Q16236 605 aa13.57□□□□□ -0.24
TPM1-210ENST00000558264 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
TPM1-210ENST00000558264 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
TPM1-210ENST00000558264 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
TPM1-210ENST00000558264 TRIM27P14373 513 aa13.56□□□□□ -0.24
TPM1-210ENST00000558264 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
TPM1-210ENST00000558264 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
TPM1-210ENST00000558264 CDK12Q9NYV4 1490 aaPredicted RBP13.56□□□□□ -0.24
TPM1-210ENST00000558264 AKAP12Q02952 1782 aa13.55□□□□□ -0.24
TPM1-210ENST00000558264 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
TPM1-210ENST00000558264 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms