RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 RUFY2Q8WXA3 655 aa18.82■□□□□ 0.6
LRP1-211ENST00000556356 PTMAP06454 111 aaKnown RBP18.82■□□□□ 0.6
LRP1-211ENST00000556356 TRIM44Q96DX7 344 aaPredicted RBP18.82■□□□□ 0.6
LRP1-211ENST00000556356 NEO1Q92859 1461 aa18.81■□□□□ 0.6
LRP1-211ENST00000556356 FAM177BA6PVY3 158 aa18.81■□□□□ 0.6
LRP1-211ENST00000556356 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
LRP1-211ENST00000556356 HSPA2P54652 639 aa18.81■□□□□ 0.6
LRP1-211ENST00000556356 UBAP1LF5GYI3 381 aa18.8■□□□□ 0.6
LRP1-211ENST00000556356 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
LRP1-211ENST00000556356 TRIM34Q9BYJ4 488 aa18.8■□□□□ 0.6
LRP1-211ENST00000556356 SAMD9Q5K651 1589 aa18.8■□□□□ 0.6
LRP1-211ENST00000556356 GNAT3A8MTJ3 354 aa18.8■□□□□ 0.6
LRP1-211ENST00000556356 BTBD11A6QL63 1104 aa18.79■□□□□ 0.6
LRP1-211ENST00000556356 NFE2L2Q16236 605 aa18.79■□□□□ 0.6
LRP1-211ENST00000556356 ACEP12821 1306 aa18.79■□□□□ 0.6
LRP1-211ENST00000556356 ATP7AQ04656 1500 aa18.78■□□□□ 0.6
LRP1-211ENST00000556356 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
LRP1-211ENST00000556356 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
LRP1-211ENST00000556356 AMOTQ4VCS5 1084 aa18.78■□□□□ 0.6
LRP1-211ENST00000556356 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
LRP1-211ENST00000556356 PANK1Q8TE04 598 aa18.77■□□□□ 0.6
LRP1-211ENST00000556356 NEUROD6Q96NK8 337 aa18.77■□□□□ 0.6
LRP1-211ENST00000556356 NCKAP5LQ9HCH0 1330 aa18.77■□□□□ 0.6
LRP1-211ENST00000556356 ST18O60284 1047 aa18.77■□□□□ 0.6
LRP1-211ENST00000556356 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
LRP1-211ENST00000556356 ERC2O15083 957 aa18.77■□□□□ 0.6
LRP1-211ENST00000556356 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.59
LRP1-211ENST00000556356 PLCB2Q00722 1185 aa18.77■□□□□ 0.59
LRP1-211ENST00000556356 KIF3AQ9Y496 699 aa18.76■□□□□ 0.59
LRP1-211ENST00000556356 NSD2O96028 1365 aa18.76■□□□□ 0.59
LRP1-211ENST00000556356 CT47B1P0C2W7 299 aaPredicted RBP18.76■□□□□ 0.59
LRP1-211ENST00000556356 CHMP4CQ96CF2 233 aa18.75■□□□□ 0.59
LRP1-211ENST00000556356 EMILIN1Q9Y6C2 1016 aa18.75■□□□□ 0.59
LRP1-211ENST00000556356 UHRF1BP1Q6BDS2 1440 aa18.75■□□□□ 0.59
LRP1-211ENST00000556356 GOLGA6L6A8MZA4 724 aa18.75■□□□□ 0.59
LRP1-211ENST00000556356 NOL8Q76FK4 1167 aaKnown RBP18.75■□□□□ 0.59
LRP1-211ENST00000556356 APPP05067 770 aa18.74■□□□□ 0.59
LRP1-211ENST00000556356 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
LRP1-211ENST00000556356 TMPOP42166 694 aaKnown RBP18.73■□□□□ 0.59
LRP1-211ENST00000556356 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
LRP1-211ENST00000556356 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
LRP1-211ENST00000556356 MYL6BP14649 208 aa18.73■□□□□ 0.59
LRP1-211ENST00000556356 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
LRP1-211ENST00000556356 STARD3NLO95772 234 aa18.72■□□□□ 0.59
LRP1-211ENST00000556356 TTC21BQ7Z4L5 1316 aa18.72■□□□□ 0.59
LRP1-211ENST00000556356 REC8O95072 547 aa18.72■□□□□ 0.59
LRP1-211ENST00000556356 TTC21AQ8NDW8 1320 aa18.72■□□□□ 0.59
LRP1-211ENST00000556356 SYNE3Q6ZMZ3 975 aa18.72■□□□□ 0.59
LRP1-211ENST00000556356 DNMT1P26358 1616 aaKnown RBP18.72■□□□□ 0.59
LRP1-211ENST00000556356 CCT4P50991 539 aaKnown RBP18.71■□□□□ 0.59
LRP1-211ENST00000556356 TBX22Q9Y458 520 aa18.71■□□□□ 0.59
LRP1-211ENST00000556356 EXOC5O00471 708 aa18.71■□□□□ 0.59
LRP1-211ENST00000556356 ZKSCAN1P17029 563 aaPredicted RBP18.71■□□□□ 0.59
LRP1-211ENST00000556356 SRCIN1Q9C0H9 1055 aa18.71■□□□□ 0.59
LRP1-211ENST00000556356 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
LRP1-211ENST00000556356 ZFYVE16Q7Z3T8 1539 aa18.7■□□□□ 0.58
LRP1-211ENST00000556356 SURF6O75683 361 aaKnown RBP18.7■□□□□ 0.58
LRP1-211ENST00000556356 CLASRPQ8N2M8 674 aaKnown RBP18.7■□□□□ 0.58
LRP1-211ENST00000556356 C11orf95C9JLR9 678 aaPredicted RBP18.7■□□□□ 0.58
LRP1-211ENST00000556356 CLSTN1O94985 981 aa18.69■□□□□ 0.58
LRP1-211ENST00000556356 GNAI2P04899 355 aa18.69■□□□□ 0.58
LRP1-211ENST00000556356 PPP1R1BQ9UD71 204 aaPredicted RBP18.69■□□□□ 0.58
LRP1-211ENST00000556356 NOB1Q9ULX3 412 aaKnown RBP18.69■□□□□ 0.58
LRP1-211ENST00000556356 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
LRP1-211ENST00000556356 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
LRP1-211ENST00000556356 AKAP17AQ02040 695 aaKnown RBP18.69■□□□□ 0.58
LRP1-211ENST00000556356 CCDC34Q96HJ3 373 aa18.69■□□□□ 0.58
LRP1-211ENST00000556356 SLKQ9H2G2 1235 aaPredicted RBP18.69■□□□□ 0.58
LRP1-211ENST00000556356 PTMSP20962 102 aa18.68■□□□□ 0.58
LRP1-211ENST00000556356 NRDCO43847 1150 aa18.68■□□□□ 0.58
LRP1-211ENST00000556356 LNPKQ9C0E8 428 aa18.68■□□□□ 0.58
LRP1-211ENST00000556356 WWC1Q8IX03 1113 aa18.68■□□□□ 0.58
LRP1-211ENST00000556356 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.68■□□□□ 0.58
LRP1-211ENST00000556356 RBM19Q9Y4C8 960 aaKnown RBP18.68■□□□□ 0.58
LRP1-211ENST00000556356 PRAG1Q86YV5 1406 aa18.68■□□□□ 0.58
LRP1-211ENST00000556356 ANKRD36BQ8N2N9 1353 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 TRDNQ13061 729 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 ZNF428Q96B54 188 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 CNNM1Q9NRU3 951 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 RNF20Q5VTR2 975 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 CPLX2Q6PUV4 134 aaKnown RBP18.67■□□□□ 0.58
LRP1-211ENST00000556356 ERC1Q8IUD2 1116 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 CHD1O14646 1710 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 PPIP5K1Q6PFW1 1433 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 RALGAPBQ86X10 1494 aa18.67■□□□□ 0.58
LRP1-211ENST00000556356 MCM10Q7L590 875 aa18.66■□□□□ 0.58
LRP1-211ENST00000556356 PDE3AQ14432 1141 aa18.66■□□□□ 0.58
LRP1-211ENST00000556356 TAF7Q15545 349 aaPredicted RBP18.66■□□□□ 0.58
LRP1-211ENST00000556356 ADGRL2O95490 1459 aa18.66■□□□□ 0.58
LRP1-211ENST00000556356 PTCD1O75127 700 aaKnown RBP18.66■□□□□ 0.58
LRP1-211ENST00000556356 CHRNA2Q15822 529 aa18.65■□□□□ 0.58
LRP1-211ENST00000556356 ANKRD24Q8TF21 1146 aa18.65■□□□□ 0.58
LRP1-211ENST00000556356 ABCA8O94911 1581 aa18.65■□□□□ 0.58
LRP1-211ENST00000556356 KCNA6P17658 529 aa18.65■□□□□ 0.58
LRP1-211ENST00000556356 CTDP1Q9Y5B0 961 aaPredicted RBP18.65■□□□□ 0.58
LRP1-211ENST00000556356 CCDC27Q2M243 656 aa18.65■□□□□ 0.58
LRP1-211ENST00000556356 WASHC4Q2M389 1173 aa18.65■□□□□ 0.58
LRP1-211ENST00000556356 RAD21O60216 631 aa18.65■□□□□ 0.58
LRP1-211ENST00000556356 MARCH6O60337 910 aa18.64■□□□□ 0.58
LRP1-211ENST00000556356 MAPKBP1O60336 1514 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms