RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 GLI2P10070 1586 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 FRMPD1Q5SYB0 1578 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 SHPRHQ149N8 1683 aa9.05□□□□□ -0.96
TDP1-213ENST00000555880 VASPP50552 380 aaPredicted RBP9.05□□□□□ -0.96
TDP1-213ENST00000555880 ATN1P54259 1190 aaPredicted RBP9.04□□□□□ -0.96
TDP1-213ENST00000555880 PDE3AQ14432 1141 aa9.04□□□□□ -0.96
TDP1-213ENST00000555880 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
TDP1-213ENST00000555880 NEFMP07197 916 aa9.04□□□□□ -0.96
TDP1-213ENST00000555880 WWC1Q8IX03 1113 aa9.04□□□□□ -0.96
TDP1-213ENST00000555880 RUNDC1Q96C34 613 aa9.04□□□□□ -0.96
TDP1-213ENST00000555880 BMP2KQ9NSY1 1161 aaPredicted RBP9.04□□□□□ -0.96
TDP1-213ENST00000555880 METRNQ9UJH8 293 aa9.04□□□□□ -0.96
TDP1-213ENST00000555880 LAS1LQ9Y4W2 734 aaKnown RBP9.04□□□□□ -0.96
TDP1-213ENST00000555880 EVC2Q86UK5 1308 aa9.04□□□□□ -0.96
TDP1-213ENST00000555880 NSD2O96028 1365 aa9.04□□□□□ -0.96
TDP1-213ENST00000555880 VIRMAQ69YN4 1812 aaKnown RBP9.03□□□□□ -0.96
TDP1-213ENST00000555880 VGFO15240 615 aaPredicted RBP9.03□□□□□ -0.96
TDP1-213ENST00000555880 BCAR3O75815 825 aa9.03□□□□□ -0.96
TDP1-213ENST00000555880 TNNT2P45379 298 aaPredicted RBP9.03□□□□□ -0.96
TDP1-213ENST00000555880 SKAP1Q86WV1 359 aa9.03□□□□□ -0.96
TDP1-213ENST00000555880 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
TDP1-213ENST00000555880 ARHGEF28Q8N1W1 1705 aaKnown RBP9.03□□□□□ -0.96
TDP1-213ENST00000555880 RGS3P49796 1198 aa9.02□□□□□ -0.96
TDP1-213ENST00000555880 AAMPQ13685 434 aa9.02□□□□□ -0.96
TDP1-213ENST00000555880 SLC12A5Q9H2X9 1139 aa9.02□□□□□ -0.96
TDP1-213ENST00000555880 PIK3C2BO00750 1634 aa9.02□□□□□ -0.97
TDP1-213ENST00000555880 TMEM132EQ6IEE7 984 aa9.02□□□□□ -0.97
TDP1-213ENST00000555880 PCDHB13Q9Y5F0 798 aa9.02□□□□□ -0.97
TDP1-213ENST00000555880 IQSEC2Q5JU85 1478 aa9.01□□□□□ -0.97
TDP1-213ENST00000555880 MAPK8IP3Q9UPT6 1336 aa9.01□□□□□ -0.97
TDP1-213ENST00000555880 WDR63Q8IWG1 891 aa9.01□□□□□ -0.97
TDP1-213ENST00000555880 CLUAP1Q96AJ1 413 aa9.01□□□□□ -0.97
TDP1-213ENST00000555880 NEXMIFQ5QGS0 1516 aa9.01□□□□□ -0.97
TDP1-213ENST00000555880 ANKRD36BQ8N2N9 1353 aa9□□□□□ -0.97
TDP1-213ENST00000555880 NEUROD2Q15784 382 aa9□□□□□ -0.97
TDP1-213ENST00000555880 C8orf34Q49A92 452 aa9□□□□□ -0.97
TDP1-213ENST00000555880 TCP11L2Q8N4U5 519 aa9□□□□□ -0.97
TDP1-213ENST00000555880 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
TDP1-213ENST00000555880 SIGLEC1Q9BZZ2 1709 aa9□□□□□ -0.97
TDP1-213ENST00000555880 MTHFSP49914 203 aa9□□□□□ -0.97
TDP1-213ENST00000555880 CCDC27Q2M243 656 aa9□□□□□ -0.97
TDP1-213ENST00000555880 SLC39A7Q92504 469 aa9□□□□□ -0.97
TDP1-213ENST00000555880 FRAT1Q92837 279 aaPredicted RBP9□□□□□ -0.97
TDP1-213ENST00000555880 TULP4Q9NRJ4 1543 aa8.99□□□□□ -0.97
TDP1-213ENST00000555880 PMFBP1Q8TBY8 1022 aa8.99□□□□□ -0.97
TDP1-213ENST00000555880 OTUD5Q96G74 571 aa8.99□□□□□ -0.97
TDP1-213ENST00000555880 RRP7AQ9Y3A4 280 aaKnown RBP8.99□□□□□ -0.97
TDP1-213ENST00000555880 DIP2BQ9P265 1576 aa8.99□□□□□ -0.97
TDP1-213ENST00000555880 DIP2CQ9Y2E4 1556 aa8.99□□□□□ -0.97
TDP1-213ENST00000555880 ARHGAP31Q2M1Z3 1444 aa8.99□□□□□ -0.97
TDP1-213ENST00000555880 TIE1P35590 1138 aa8.98□□□□□ -0.97
TDP1-213ENST00000555880 IFNL1Q8IU54 200 aa8.98□□□□□ -0.97
TDP1-213ENST00000555880 PANK1Q8TE04 598 aa8.98□□□□□ -0.97
TDP1-213ENST00000555880 COG6Q9Y2V7 657 aa8.98□□□□□ -0.97
TDP1-213ENST00000555880 U2AF1L5P0DN76 240 aaPredicted RBP8.98□□□□□ -0.97
TDP1-213ENST00000555880 C7P10643 843 aa8.98□□□□□ -0.97
TDP1-213ENST00000555880 RARSP54136 660 aaKnown RBP8.98□□□□□ -0.97
TDP1-213ENST00000555880 U2AF1Q01081 240 aaKnown RBP eCLIP8.98□□□□□ -0.97
TDP1-213ENST00000555880 DCAF8Q5TAQ9 597 aa8.98□□□□□ -0.97
TDP1-213ENST00000555880 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
TDP1-213ENST00000555880 ZFYVE9O95405 1425 aa8.97□□□□□ -0.97
TDP1-213ENST00000555880 TTLL13PA6NNM8 815 aa8.97□□□□□ -0.97
TDP1-213ENST00000555880 SLC52A1Q9NWF4 448 aa8.97□□□□□ -0.97
TDP1-213ENST00000555880 YEATS2Q9ULM3 1422 aa8.97□□□□□ -0.97
TDP1-213ENST00000555880 IGHDP01880 384 aa8.96□□□□□ -0.97
TDP1-213ENST00000555880 PYGBP11216 843 aa8.96□□□□□ -0.97
TDP1-213ENST00000555880 SGIP1Q9BQI5 828 aa8.96□□□□□ -0.97
TDP1-213ENST00000555880 ADGRB2O60241 1585 aa8.96□□□□□ -0.97
TDP1-213ENST00000555880 RICTORQ6R327 1708 aa8.96□□□□□ -0.97
TDP1-213ENST00000555880 ANKRD26Q9UPS8 1709 aa8.96□□□□□ -0.97
TDP1-213ENST00000555880 CT47B1P0C2W7 299 aaPredicted RBP8.96□□□□□ -0.98
TDP1-213ENST00000555880 SRPK2P78362 688 aaKnown RBP8.96□□□□□ -0.98
TDP1-213ENST00000555880 NUTM2DQ5VT03 806 aaPredicted RBP8.96□□□□□ -0.98
TDP1-213ENST00000555880 CABP2Q9NPB3 220 aa8.96□□□□□ -0.98
TDP1-213ENST00000555880 TERF2IPQ9NYB0 399 aa8.96□□□□□ -0.98
TDP1-213ENST00000555880 MYO5BQ9ULV0 1848 aa8.96□□□□□ -0.98
TDP1-213ENST00000555880 ZMYM3Q14202 1370 aa8.95□□□□□ -0.98
TDP1-213ENST00000555880 ATAD2Q6PL18 1390 aa8.95□□□□□ -0.98
TDP1-213ENST00000555880 ABCC11Q96J66 1382 aa8.95□□□□□ -0.98
TDP1-213ENST00000555880 PREX1Q8TCU6 1659 aa8.95□□□□□ -0.98
TDP1-213ENST00000555880 RWDD1Q9H446 243 aaPredicted RBP8.95□□□□□ -0.98
TDP1-213ENST00000555880 ESF1Q9H501 851 aaKnown RBP8.95□□□□□ -0.98
TDP1-213ENST00000555880 UPF2Q9HAU5 1272 aaKnown RBP8.95□□□□□ -0.98
TDP1-213ENST00000555880 POTEJP0CG39 1038 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 SAFB2Q14151 953 aaKnown RBP eCLIP8.94□□□□□ -0.98
TDP1-213ENST00000555880 FTSJ3Q8IY81 847 aaKnown RBP8.94□□□□□ -0.98
TDP1-213ENST00000555880 A0A1W2PP64 1363 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 CLTCQ00610 1675 aaKnown RBP8.94□□□□□ -0.98
TDP1-213ENST00000555880 TMEM131LA2VDJ0 1609 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 POTEFA5A3E0 1075 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 SLC4A3P48751 1232 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 IDI1Q13907 227 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 BECN1Q14457 450 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 PNNQ9H307 717 aaKnown RBP8.94□□□□□ -0.98
TDP1-213ENST00000555880 POGKQ9P215 609 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 STK26Q9P289 416 aa8.94□□□□□ -0.98
TDP1-213ENST00000555880 MED14O60244 1454 aa8.93□□□□□ -0.98
TDP1-213ENST00000555880 U2SURPO15042 1029 aaKnown RBP8.93□□□□□ -0.98
TDP1-213ENST00000555880 NFKBIBQ15653 356 aa8.93□□□□□ -0.98
TDP1-213ENST00000555880 ZKSCAN2Q63HK3 967 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms