RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 BECN2A8MW95 431 aa11.09□□□□□ -0.63
CCNK-203ENST00000553865 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
CCNK-203ENST00000553865 ABCC1P33527 1531 aa11.09□□□□□ -0.63
CCNK-203ENST00000553865 KDM5DQ9BY66 1539 aa11.09□□□□□ -0.63
CCNK-203ENST00000553865 PES1O00541 588 aaKnown RBP11.09□□□□□ -0.63
CCNK-203ENST00000553865 TEFQ10587 303 aa11.09□□□□□ -0.63
CCNK-203ENST00000553865 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.09□□□□□ -0.63
CCNK-203ENST00000553865 UHRF1BP1Q6BDS2 1440 aa11.09□□□□□ -0.63
CCNK-203ENST00000553865 AK7Q96M32 723 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 PZPP20742 1482 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 ANKLE2Q86XL3 938 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 MTHFSP49914 203 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 ARGLU1Q9NWB6 273 aaPredicted RBP11.08□□□□□ -0.64
CCNK-203ENST00000553865 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
CCNK-203ENST00000553865 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
CCNK-203ENST00000553865 MAP7D2Q96T17 732 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 CABP2Q9NPB3 220 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 CWC15Q9P013 229 aaKnown RBP11.08□□□□□ -0.64
CCNK-203ENST00000553865 PLXNC1O60486 1568 aa11.08□□□□□ -0.64
CCNK-203ENST00000553865 RUFY2Q8WXA3 655 aa11.07□□□□□ -0.64
CCNK-203ENST00000553865 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
CCNK-203ENST00000553865 IPO7O95373 1038 aaKnown RBP11.07□□□□□ -0.64
CCNK-203ENST00000553865 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
CCNK-203ENST00000553865 GGNBP2Q9H3C7 697 aa11.07□□□□□ -0.64
CCNK-203ENST00000553865 RDXP35241 583 aaKnown RBP11.07□□□□□ -0.64
CCNK-203ENST00000553865 MTERF4Q7Z6M4 381 aaKnown RBP11.07□□□□□ -0.64
CCNK-203ENST00000553865 TCP11L2Q8N4U5 519 aa11.07□□□□□ -0.64
CCNK-203ENST00000553865 FRAT2O75474 233 aaPredicted RBP11.07□□□□□ -0.64
CCNK-203ENST00000553865 PANK1Q8TE04 598 aa11.07□□□□□ -0.64
CCNK-203ENST00000553865 RUFY1Q96T51 708 aa11.07□□□□□ -0.64
CCNK-203ENST00000553865 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 TMEM132EQ6IEE7 984 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 TOMM22Q9NS69 142 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 SAMD9LQ8IVG5 1584 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 MBD5Q9P267 1494 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 CCDC66A2RUB6 948 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 NEXNQ0ZGT2 675 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 INTS3Q68E01 1043 aaKnown RBP11.06□□□□□ -0.64
CCNK-203ENST00000553865 PRAG1Q86YV5 1406 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 GPRASP1Q5JY77 1395 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 TNRQ92752 1358 aa11.06□□□□□ -0.64
CCNK-203ENST00000553865 DCTN1Q14203 1278 aa11.05□□□□□ -0.64
CCNK-203ENST00000553865 C14orf93Q9H972 538 aaKnown RBP11.05□□□□□ -0.64
CCNK-203ENST00000553865 MLH3Q9UHC1 1453 aa11.05□□□□□ -0.64
CCNK-203ENST00000553865 DIAPH3Q9NSV4 1193 aa11.05□□□□□ -0.64
CCNK-203ENST00000553865 H3BQV1 296 aa11.05□□□□□ -0.64
CCNK-203ENST00000553865 CT47B1P0C2W7 299 aaPredicted RBP11.05□□□□□ -0.64
CCNK-203ENST00000553865 HSP90B2PQ58FF3 399 aa11.05□□□□□ -0.64
CCNK-203ENST00000553865 IFFO2Q5TF58 517 aa11.05□□□□□ -0.64
CCNK-203ENST00000553865 C22orf23Q9BZE7 217 aa11.05□□□□□ -0.64
CCNK-203ENST00000553865 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
CCNK-203ENST00000553865 ZFYVE16Q7Z3T8 1539 aa11.05□□□□□ -0.64
CCNK-203ENST00000553865 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
CCNK-203ENST00000553865 H0YHG0 523 aa11.04□□□□□ -0.64
CCNK-203ENST00000553865 MARCH6O60337 910 aa11.04□□□□□ -0.64
CCNK-203ENST00000553865 HSP90AB4PQ58FF6 505 aa11.04□□□□□ -0.64
CCNK-203ENST00000553865 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
CCNK-203ENST00000553865 PSME1Q06323 249 aa11.04□□□□□ -0.64
CCNK-203ENST00000553865 DDX58O95786 925 aaKnown RBP11.03□□□□□ -0.64
CCNK-203ENST00000553865 TSPYL4Q9UJ04 414 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 HMOX1P09601 288 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 SYNE3Q6ZMZ3 975 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 HOMER1Q86YM7 354 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 WDR63Q8IWG1 891 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 PKNOX2Q96KN3 472 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 PRAM1Q96QH2 718 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 C9orf78Q9NZ63 289 aaPredicted RBP11.03□□□□□ -0.64
CCNK-203ENST00000553865 NUCB2P80303 420 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 FKBP5Q13451 457 aaPredicted RBP11.03□□□□□ -0.64
CCNK-203ENST00000553865 TTC5Q8N0Z6 440 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 NOS1P29475 1434 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 FAM43AQ8N2R8 423 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 ZKSCAN1P17029 563 aaPredicted RBP11.03□□□□□ -0.64
CCNK-203ENST00000553865 LNPKQ9C0E8 428 aa11.03□□□□□ -0.64
CCNK-203ENST00000553865 CDC45O75419 566 aa11.02□□□□□ -0.64
CCNK-203ENST00000553865 ATF3P18847 181 aa11.02□□□□□ -0.64
CCNK-203ENST00000553865 FBXO3Q9UK99 471 aa11.02□□□□□ -0.64
CCNK-203ENST00000553865 TTC37Q6PGP7 1564 aa11.02□□□□□ -0.64
CCNK-203ENST00000553865 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
CCNK-203ENST00000553865 FOXD4L5Q5VV16 416 aaPredicted RBP11.01□□□□□ -0.65
CCNK-203ENST00000553865 AMOTL1Q8IY63 956 aa11.01□□□□□ -0.65
CCNK-203ENST00000553865 ANKRD20A12PQ8NF67 263 aa11.01□□□□□ -0.65
CCNK-203ENST00000553865 FOXD4L4Q8WXT5 416 aaPredicted RBP11.01□□□□□ -0.65
CCNK-203ENST00000553865 HECW2Q9P2P5 1572 aa11.01□□□□□ -0.65
CCNK-203ENST00000553865 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
CCNK-203ENST00000553865 MNS1Q8NEH6 495 aa11.01□□□□□ -0.65
CCNK-203ENST00000553865 NOL10Q9BSC4 688 aaKnown RBP11□□□□□ -0.65
CCNK-203ENST00000553865 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
CCNK-203ENST00000553865 CDC42BPAQ5VT25 1732 aa11□□□□□ -0.65
CCNK-203ENST00000553865 NFKBIBQ15653 356 aa11□□□□□ -0.65
CCNK-203ENST00000553865 CDK19Q9BWU1 502 aa11□□□□□ -0.65
CCNK-203ENST00000553865 CCDC184Q52MB2 194 aa11□□□□□ -0.65
CCNK-203ENST00000553865 RNF20Q5VTR2 975 aa11□□□□□ -0.65
CCNK-203ENST00000553865 CROCC2H7BZ55 1655 aa10.99□□□□□ -0.65
CCNK-203ENST00000553865 EXOSC9Q06265 439 aaKnown RBP10.99□□□□□ -0.65
CCNK-203ENST00000553865 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
CCNK-203ENST00000553865 ERC2O15083 957 aa10.99□□□□□ -0.65
CCNK-203ENST00000553865 EVA1CP58658 441 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms