RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
TGFBR1-209ENST00000552516 CHMP4BQ9H444 224 aaKnown RBP13.37□□□□□ -0.27
TGFBR1-209ENST00000552516 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
TGFBR1-209ENST00000552516 DTNBO60941 627 aa13.37□□□□□ -0.27
TGFBR1-209ENST00000552516 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
TGFBR1-209ENST00000552516 HMMRO75330 724 aa13.37□□□□□ -0.27
TGFBR1-209ENST00000552516 RAPGEF4Q8WZA2 1011 aa13.37□□□□□ -0.27
TGFBR1-209ENST00000552516 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 LARP6Q9BRS8 491 aaKnown RBP13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 PBRM1Q86U86 1689 aa13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 DDX17Q92841 729 aaKnown RBP13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 TTC5Q8N0Z6 440 aa13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 NAP1L5Q96NT1 182 aaPredicted RBP13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 TSPYL6Q8N831 410 aa13.36□□□□□ -0.27
TGFBR1-209ENST00000552516 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 PTCD1O75127 700 aaKnown RBP13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 THEMISQ8N1K5 641 aaPredicted RBP13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 NFKBIBQ15653 356 aa13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 ZNF530Q6P9A1 599 aaPredicted RBP13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 TRIM27P14373 513 aa13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 PIP4K2BP78356 416 aa13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
TGFBR1-209ENST00000552516 MPNDQ8N594 471 aa13.34□□□□□ -0.27
TGFBR1-209ENST00000552516 RIC3Q7Z5B4 369 aa13.34□□□□□ -0.27
TGFBR1-209ENST00000552516 PCDHB15Q9Y5E8 787 aa13.34□□□□□ -0.27
TGFBR1-209ENST00000552516 ACEP12821 1306 aa13.34□□□□□ -0.27
TGFBR1-209ENST00000552516 MVPQ14764 893 aaKnown RBP13.34□□□□□ -0.27
TGFBR1-209ENST00000552516 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
TGFBR1-209ENST00000552516 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
TGFBR1-209ENST00000552516 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.28
TGFBR1-209ENST00000552516 HSP90B1P14625 803 aaKnown RBP13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 NUP160Q12769 1436 aa13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 UGGT1Q9NYU2 1555 aa13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 KIF16BQ96L93 1317 aa13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 LRRC59Q96AG4 307 aaKnown RBP13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 A2MP01023 1474 aa13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 SCAF11Q99590 1463 aaKnown RBP13.32□□□□□ -0.28
TGFBR1-209ENST00000552516 MCCP23508 829 aa13.31□□□□□ -0.28
TGFBR1-209ENST00000552516 ABCC10Q5T3U5 1492 aa13.31□□□□□ -0.28
TGFBR1-209ENST00000552516 FBXW7Q969H0 707 aa13.31□□□□□ -0.28
TGFBR1-209ENST00000552516 STAC3Q96MF2 364 aa13.31□□□□□ -0.28
TGFBR1-209ENST00000552516 PPFIA3O75145 1194 aa13.31□□□□□ -0.28
TGFBR1-209ENST00000552516 UBTFL1P0CB47 393 aaPredicted RBP13.31□□□□□ -0.28
TGFBR1-209ENST00000552516 NFE2L2Q16236 605 aa13.31□□□□□ -0.28
TGFBR1-209ENST00000552516 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
TGFBR1-209ENST00000552516 NUTM1Q86Y26 1132 aa13.3□□□□□ -0.28
TGFBR1-209ENST00000552516 GOLGA6L4A6NEF3 574 aa13.3□□□□□ -0.28
TGFBR1-209ENST00000552516 TEX14Q8IWB6 1497 aa13.3□□□□□ -0.28
TGFBR1-209ENST00000552516 ATAD2Q6PL18 1390 aa13.3□□□□□ -0.28
TGFBR1-209ENST00000552516 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
TGFBR1-209ENST00000552516 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
TGFBR1-209ENST00000552516 TOM1L2Q6ZVM7 507 aa13.29□□□□□ -0.28
TGFBR1-209ENST00000552516 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
TGFBR1-209ENST00000552516 IL27Q8NEV9 243 aa13.29□□□□□ -0.28
TGFBR1-209ENST00000552516 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
TGFBR1-209ENST00000552516 SEC24BO95487 1268 aa13.28□□□□□ -0.28
TGFBR1-209ENST00000552516 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
TGFBR1-209ENST00000552516 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
TGFBR1-209ENST00000552516 C16orf71Q8IYS4 520 aaPredicted RBP13.28□□□□□ -0.28
TGFBR1-209ENST00000552516 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
TGFBR1-209ENST00000552516 FCHSD2O94868 740 aa13.27□□□□□ -0.28
TGFBR1-209ENST00000552516 PDE3AQ14432 1141 aa13.27□□□□□ -0.28
TGFBR1-209ENST00000552516 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
TGFBR1-209ENST00000552516 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
TGFBR1-209ENST00000552516 DDX49Q9Y6V7 483 aaKnown RBP13.27□□□□□ -0.29
TGFBR1-209ENST00000552516 RALGAPBQ86X10 1494 aa13.27□□□□□ -0.29
TGFBR1-209ENST00000552516 CCDC27Q2M243 656 aa13.27□□□□□ -0.29
TGFBR1-209ENST00000552516 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
TGFBR1-209ENST00000552516 DNAJC2Q99543 621 aaKnown RBP13.26□□□□□ -0.29
TGFBR1-209ENST00000552516 DIAPH3Q9NSV4 1193 aa13.26□□□□□ -0.29
TGFBR1-209ENST00000552516 RPGRIP1LQ68CZ1 1315 aa13.26□□□□□ -0.29
TGFBR1-209ENST00000552516 PRDM11Q9NQV5 511 aa13.26□□□□□ -0.29
TGFBR1-209ENST00000552516 KCNA6P17658 529 aa13.26□□□□□ -0.29
TGFBR1-209ENST00000552516 MTMR7Q9Y216 660 aa13.26□□□□□ -0.29
TGFBR1-209ENST00000552516 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
TGFBR1-209ENST00000552516 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
TGFBR1-209ENST00000552516 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
TGFBR1-209ENST00000552516 A0A1W2PP64 1363 aa13.25□□□□□ -0.29
TGFBR1-209ENST00000552516 GSE1Q14687 1217 aa13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 YEATS2Q9ULM3 1422 aa13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 SRGAP3O43295 1099 aa13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 NEK4P51957 841 aa13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 UPF3BQ9BZI7 483 aaKnown RBP13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
TGFBR1-209ENST00000552516 UHRF1BP1Q6BDS2 1440 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms