RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 OTUD5Q96G74 571 aa12.54□□□□□ -0.4
LETMD1-225ENST00000550715 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
LETMD1-225ENST00000550715 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
LETMD1-225ENST00000550715 LTKP29376 864 aa12.53□□□□□ -0.4
LETMD1-225ENST00000550715 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
LETMD1-225ENST00000550715 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
LETMD1-225ENST00000550715 AMHR2Q16671 573 aa12.52□□□□□ -0.41
LETMD1-225ENST00000550715 PARP9Q8IXQ6 854 aa12.52□□□□□ -0.41
LETMD1-225ENST00000550715 SPATA31A6Q5VVP1 1343 aa12.52□□□□□ -0.41
LETMD1-225ENST00000550715 SNPHO15079 494 aa12.51□□□□□ -0.41
LETMD1-225ENST00000550715 FAM161AQ3B820 660 aa12.51□□□□□ -0.41
LETMD1-225ENST00000550715 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
LETMD1-225ENST00000550715 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
LETMD1-225ENST00000550715 CLIP1P30622 1438 aa12.51□□□□□ -0.41
LETMD1-225ENST00000550715 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
LETMD1-225ENST00000550715 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
LETMD1-225ENST00000550715 PZPP20742 1482 aa12.5□□□□□ -0.41
LETMD1-225ENST00000550715 NLRP1Q9C000 1473 aa12.5□□□□□ -0.41
LETMD1-225ENST00000550715 ZC3H13Q5T200 1668 aaKnown RBP12.5□□□□□ -0.41
LETMD1-225ENST00000550715 PHLPP1O60346 1717 aa12.49□□□□□ -0.41
LETMD1-225ENST00000550715 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
LETMD1-225ENST00000550715 ATP7AQ04656 1500 aa12.49□□□□□ -0.41
LETMD1-225ENST00000550715 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
LETMD1-225ENST00000550715 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
LETMD1-225ENST00000550715 TXNDC2Q86VQ3 553 aa12.49□□□□□ -0.41
LETMD1-225ENST00000550715 KDM5DQ9BY66 1539 aa12.48□□□□□ -0.41
LETMD1-225ENST00000550715 RGS12O14924 1447 aa12.48□□□□□ -0.41
LETMD1-225ENST00000550715 AFF2P51816 1311 aa12.48□□□□□ -0.41
LETMD1-225ENST00000550715 KIF3BO15066 747 aa12.48□□□□□ -0.41
LETMD1-225ENST00000550715 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
LETMD1-225ENST00000550715 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-225ENST00000550715 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
LETMD1-225ENST00000550715 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
LETMD1-225ENST00000550715 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.41
LETMD1-225ENST00000550715 KCNA6P17658 529 aa12.45□□□□□ -0.42
LETMD1-225ENST00000550715 PHOX2BQ99453 314 aa12.45□□□□□ -0.42
LETMD1-225ENST00000550715 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
LETMD1-225ENST00000550715 COL9A1P20849 921 aa12.44□□□□□ -0.42
LETMD1-225ENST00000550715 LHX8Q68G74 356 aa12.44□□□□□ -0.42
LETMD1-225ENST00000550715 SCAF11Q99590 1463 aaKnown RBP12.43□□□□□ -0.42
LETMD1-225ENST00000550715 NLRP7Q8WX94 980 aa12.43□□□□□ -0.42
LETMD1-225ENST00000550715 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
LETMD1-225ENST00000550715 COL16A1Q07092 1604 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-225ENST00000550715 INO80Q9ULG1 1556 aaPredicted RBP12.43□□□□□ -0.42
LETMD1-225ENST00000550715 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
LETMD1-225ENST00000550715 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
LETMD1-225ENST00000550715 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-225ENST00000550715 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-225ENST00000550715 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
LETMD1-225ENST00000550715 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
LETMD1-225ENST00000550715 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
LETMD1-225ENST00000550715 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
LETMD1-225ENST00000550715 LRRC9Q6ZRR7 1453 aa12.41□□□□□ -0.42
LETMD1-225ENST00000550715 PRSS12P56730 875 aa12.41□□□□□ -0.42
LETMD1-225ENST00000550715 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
LETMD1-225ENST00000550715 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
LETMD1-225ENST00000550715 ADGRG1Q9Y653 693 aa12.41□□□□□ -0.42
LETMD1-225ENST00000550715 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
LETMD1-225ENST00000550715 PTPREP23469 700 aa12.4□□□□□ -0.42
LETMD1-225ENST00000550715 METTL3Q86U44 580 aaKnown RBP12.4□□□□□ -0.42
LETMD1-225ENST00000550715 SLC26A8Q96RN1 970 aa12.4□□□□□ -0.42
LETMD1-225ENST00000550715 TIMELESSQ9UNS1 1208 aa12.4□□□□□ -0.42
LETMD1-225ENST00000550715 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
LETMD1-225ENST00000550715 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
LETMD1-225ENST00000550715 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
LETMD1-225ENST00000550715 MSH6P52701 1360 aa12.39□□□□□ -0.43
LETMD1-225ENST00000550715 LRRIQ1Q96JM4 1722 aa12.39□□□□□ -0.43
LETMD1-225ENST00000550715 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-225ENST00000550715 GPATCH8Q9UKJ3 1502 aaKnown RBP12.38□□□□□ -0.43
LETMD1-225ENST00000550715 TTC13Q8NBP0 860 aa12.38□□□□□ -0.43
LETMD1-225ENST00000550715 CFDP1Q9UEE9 299 aaPredicted RBP12.38□□□□□ -0.43
LETMD1-225ENST00000550715 EID1Q9Y6B2 187 aa12.38□□□□□ -0.43
LETMD1-225ENST00000550715 NCOA2Q15596 1464 aa12.38□□□□□ -0.43
LETMD1-225ENST00000550715 ADGBQ8N7X0 1667 aa12.38□□□□□ -0.43
LETMD1-225ENST00000550715 PLEKHG3A1L390 1219 aa12.37□□□□□ -0.43
LETMD1-225ENST00000550715 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
LETMD1-225ENST00000550715 MS4A1P11836 297 aa12.37□□□□□ -0.43
LETMD1-225ENST00000550715 C8orf37Q96NL8 207 aa12.37□□□□□ -0.43
LETMD1-225ENST00000550715 ARHGAP23Q9P227 1491 aa12.36□□□□□ -0.43
LETMD1-225ENST00000550715 OATP04181 439 aa12.36□□□□□ -0.43
LETMD1-225ENST00000550715 CLCN1P35523 988 aa12.36□□□□□ -0.43
LETMD1-225ENST00000550715 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
LETMD1-225ENST00000550715 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
LETMD1-225ENST00000550715 YY1P25490 414 aa12.35□□□□□ -0.43
LETMD1-225ENST00000550715 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
LETMD1-225ENST00000550715 DDRGK1Q96HY6 314 aa12.35□□□□□ -0.43
LETMD1-225ENST00000550715 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
LETMD1-225ENST00000550715 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
LETMD1-225ENST00000550715 TSKSQ9UJT2 592 aa12.35□□□□□ -0.43
LETMD1-225ENST00000550715 PRDM15P57071 1507 aaPredicted RBP12.35□□□□□ -0.43
LETMD1-225ENST00000550715 EP400Q96L91 3159 aa12.34□□□□□ -0.43
LETMD1-225ENST00000550715 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
LETMD1-225ENST00000550715 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.44
LETMD1-225ENST00000550715 SLIT1O75093 1534 aa12.33□□□□□ -0.44
LETMD1-225ENST00000550715 SHPRHQ149N8 1683 aa12.33□□□□□ -0.44
LETMD1-225ENST00000550715 TMUB1Q9BVT8 246 aa12.33□□□□□ -0.44
LETMD1-225ENST00000550715 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
LETMD1-225ENST00000550715 PLEKHH2Q8IVE3 1493 aa12.32□□□□□ -0.44
LETMD1-225ENST00000550715 ARHGAP35Q9NRY4 1499 aa12.32□□□□□ -0.44
LETMD1-225ENST00000550715 C3orf80F5H4A9 247 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms