RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 NSD2O96028 1365 aa16.12■□□□□ 0.17
CALCOCO1-217ENST00000549935 DDIT3P35638 169 aa16.12■□□□□ 0.17
CALCOCO1-217ENST00000549935 ZKSCAN2Q63HK3 967 aa16.12■□□□□ 0.17
CALCOCO1-217ENST00000549935 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
CALCOCO1-217ENST00000549935 ADGRB2O60241 1585 aa16.12■□□□□ 0.17
CALCOCO1-217ENST00000549935 PUS7Q96PZ0 661 aaKnown RBP16.12■□□□□ 0.17
CALCOCO1-217ENST00000549935 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
CALCOCO1-217ENST00000549935 PIK3C2BO00750 1634 aa16.11■□□□□ 0.17
CALCOCO1-217ENST00000549935 STK26Q9P289 416 aa16.11■□□□□ 0.17
CALCOCO1-217ENST00000549935 DZIP1LQ8IYY4 767 aaKnown RBP16.1■□□□□ 0.17
CALCOCO1-217ENST00000549935 SNX21Q969T3 373 aa16.1■□□□□ 0.17
CALCOCO1-217ENST00000549935 SRPK2P78362 688 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-217ENST00000549935 A0A1W2PP64 1363 aa16.09■□□□□ 0.17
CALCOCO1-217ENST00000549935 RBM25P49756 843 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-217ENST00000549935 IDI1Q13907 227 aa16.09■□□□□ 0.17
CALCOCO1-217ENST00000549935 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
CALCOCO1-217ENST00000549935 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-217ENST00000549935 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
CALCOCO1-217ENST00000549935 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
CALCOCO1-217ENST00000549935 PANK2Q9BZ23 570 aa16.08■□□□□ 0.16
CALCOCO1-217ENST00000549935 GGNBP2Q9H3C7 697 aa16.08■□□□□ 0.16
CALCOCO1-217ENST00000549935 HSCBQ8IWL3 235 aa16.07■□□□□ 0.16
CALCOCO1-217ENST00000549935 GRPEL1Q9HAV7 217 aa16.07■□□□□ 0.16
CALCOCO1-217ENST00000549935 GLIPR1L2Q4G1C9 344 aa16.07■□□□□ 0.16
CALCOCO1-217ENST00000549935 DDX19BQ9UMR2 479 aa16.07■□□□□ 0.16
CALCOCO1-217ENST00000549935 ABCC11Q96J66 1382 aa16.07■□□□□ 0.16
CALCOCO1-217ENST00000549935 DIP2CQ9Y2E4 1556 aa16.06■□□□□ 0.16
CALCOCO1-217ENST00000549935 PTMSP20962 102 aa16.06■□□□□ 0.16
CALCOCO1-217ENST00000549935 FTSJ3Q8IY81 847 aaKnown RBP16.06■□□□□ 0.16
CALCOCO1-217ENST00000549935 MFAP1P55081 439 aaKnown RBP16.06■□□□□ 0.16
CALCOCO1-217ENST00000549935 RRP9O43818 475 aaKnown RBP16.05■□□□□ 0.16
CALCOCO1-217ENST00000549935 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
CALCOCO1-217ENST00000549935 GZF1Q9H116 711 aaPredicted RBP16.04■□□□□ 0.16
CALCOCO1-217ENST00000549935 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
CALCOCO1-217ENST00000549935 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
CALCOCO1-217ENST00000549935 SMC4Q9NTJ3 1288 aa16.04■□□□□ 0.16
CALCOCO1-217ENST00000549935 NEO1Q92859 1461 aa16.04■□□□□ 0.16
CALCOCO1-217ENST00000549935 MYO5BQ9ULV0 1848 aa16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 SKOR2Q2VWA4 1001 aaPredicted RBP16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 NAP1L5Q96NT1 182 aaPredicted RBP16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 ARHGAP31Q2M1Z3 1444 aa16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 IL16Q14005 1332 aa16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 TRIM27P14373 513 aa16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 SPRYD3Q8NCJ5 442 aa16.03■□□□□ 0.16
CALCOCO1-217ENST00000549935 ESPNB1AK53 854 aa16.02■□□□□ 0.16
CALCOCO1-217ENST00000549935 ATF7IPQ6VMQ6 1270 aa16.02■□□□□ 0.16
CALCOCO1-217ENST00000549935 PRAM1Q96QH2 718 aa16.02■□□□□ 0.16
CALCOCO1-217ENST00000549935 SLC52A1Q9NWF4 448 aa16.02■□□□□ 0.16
CALCOCO1-217ENST00000549935 TRIM35Q9UPQ4 493 aa16.02■□□□□ 0.16
CALCOCO1-217ENST00000549935 COL3A1P02461 1466 aaPredicted RBP16.02■□□□□ 0.15
CALCOCO1-217ENST00000549935 FYB1O15117 783 aa16.01■□□□□ 0.15
CALCOCO1-217ENST00000549935 ZFYVE9O95405 1425 aa16.01■□□□□ 0.15
CALCOCO1-217ENST00000549935 TERF2IPQ9NYB0 399 aa16.01■□□□□ 0.15
CALCOCO1-217ENST00000549935 PTPRMP28827 1452 aa16.01■□□□□ 0.15
CALCOCO1-217ENST00000549935 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
CALCOCO1-217ENST00000549935 ATAD2Q6PL18 1390 aa16.01■□□□□ 0.15
CALCOCO1-217ENST00000549935 NUCB1Q02818 461 aa16■□□□□ 0.15
CALCOCO1-217ENST00000549935 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
CALCOCO1-217ENST00000549935 GBP4Q96PP9 640 aa16■□□□□ 0.15
CALCOCO1-217ENST00000549935 ZBTB40Q9NUA8 1239 aa16■□□□□ 0.15
CALCOCO1-217ENST00000549935 YEATS2Q9ULM3 1422 aa16■□□□□ 0.15
CALCOCO1-217ENST00000549935 SSH1Q8WYL5 1049 aa16■□□□□ 0.15
CALCOCO1-217ENST00000549935 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
CALCOCO1-217ENST00000549935 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
CALCOCO1-217ENST00000549935 CD163L1Q9NR16 1453 aa15.98■□□□□ 0.15
CALCOCO1-217ENST00000549935 YTHDC2Q9H6S0 1430 aaKnown RBP15.98■□□□□ 0.15
CALCOCO1-217ENST00000549935 KIF16BQ96L93 1317 aa15.98■□□□□ 0.15
CALCOCO1-217ENST00000549935 RICTORQ6R327 1708 aa15.98■□□□□ 0.15
CALCOCO1-217ENST00000549935 RIPK4P57078 832 aa15.98■□□□□ 0.15
CALCOCO1-217ENST00000549935 CLEC17AQ6ZS10 378 aa15.98■□□□□ 0.15
CALCOCO1-217ENST00000549935 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
CALCOCO1-217ENST00000549935 HSP90AA2PQ14568 343 aaPredicted RBP15.97■□□□□ 0.15
CALCOCO1-217ENST00000549935 ARXQ96QS3 562 aa15.97■□□□□ 0.15
CALCOCO1-217ENST00000549935 PREX1Q8TCU6 1659 aa15.97■□□□□ 0.15
CALCOCO1-217ENST00000549935 ANKRD26Q9UPS8 1709 aa15.97■□□□□ 0.15
CALCOCO1-217ENST00000549935 DIAPH1O60610 1272 aaKnown RBP15.97■□□□□ 0.15
CALCOCO1-217ENST00000549935 BMP2KLQ5H9B9 411 aa15.97■□□□□ 0.15
CALCOCO1-217ENST00000549935 NOB1Q9ULX3 412 aaKnown RBP15.97■□□□□ 0.15
CALCOCO1-217ENST00000549935 IBTKQ9P2D0 1353 aaPredicted RBP15.96■□□□□ 0.15
CALCOCO1-217ENST00000549935 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
CALCOCO1-217ENST00000549935 HDGFL2Q7Z4V5 671 aaPredicted RBP15.96■□□□□ 0.15
CALCOCO1-217ENST00000549935 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
CALCOCO1-217ENST00000549935 MED14O60244 1454 aa15.95■□□□□ 0.14
CALCOCO1-217ENST00000549935 ERBB4Q15303 1308 aa15.95■□□□□ 0.14
CALCOCO1-217ENST00000549935 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
CALCOCO1-217ENST00000549935 ALDH1L2Q3SY69 923 aa15.95■□□□□ 0.14
CALCOCO1-217ENST00000549935 FBXO31Q5XUX0 539 aaPredicted RBP15.95■□□□□ 0.14
CALCOCO1-217ENST00000549935 CDK19Q9BWU1 502 aa15.95■□□□□ 0.14
CALCOCO1-217ENST00000549935 TMEM57Q8N5G2 664 aa15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 TRIM44Q96DX7 344 aaPredicted RBP15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 KIF2CQ99661 725 aa15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 CABP1Q9NZU7 370 aa15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 REREQ9P2R6 1566 aa15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 TPM2P07951 284 aa15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 CHD1LQ86WJ1 897 aa15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 GAS2L3Q86XJ1 694 aa15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
CALCOCO1-217ENST00000549935 PPP1R9BQ96SB3 815 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms