RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 MIS18AQ9NYP9 233 aa4.85□□□□□ -1.63
BRCA2-206ENST00000544455 ABCC11Q96J66 1382 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 CD163L1Q9NR16 1453 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 PRR36Q9H6K5 1346 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 TRIM27P14373 513 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 SSH1Q8WYL5 1049 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 PDZRN3Q9UPQ7 1066 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 ATAD2Q6PL18 1390 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 WASLO00401 505 aaPredicted RBP4.84□□□□□ -1.63
BRCA2-206ENST00000544455 FAM161AQ3B820 660 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 RIMBP3CA6NJZ7 1639 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 RIMBP3BA6NNM3 1639 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 RIMBP3Q9UFD9 1639 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 A2ML1A8K2U0 1454 aa4.84□□□□□ -1.63
BRCA2-206ENST00000544455 SBNO2Q9Y2G9 1366 aa4.84□□□□□ -1.64
BRCA2-206ENST00000544455 PPIP5K1Q6PFW1 1433 aa4.84□□□□□ -1.64
BRCA2-206ENST00000544455 SLC24A1O60721 1099 aa4.84□□□□□ -1.64
BRCA2-206ENST00000544455 NEFMP07197 916 aa4.84□□□□□ -1.64
BRCA2-206ENST00000544455 C14orf37Q86TY3 774 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 DZIP1LQ8IYY4 767 aaKnown RBP4.83□□□□□ -1.64
BRCA2-206ENST00000544455 ROBO2Q9HCK4 1378 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 TMEM57Q8N5G2 664 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 IQSEC2Q5JU85 1478 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 ALKQ9UM73 1620 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 FOXO3O43524 673 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 NECTIN2Q92692 538 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 COG3Q96JB2 828 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 QRICH2Q9H0J4 1663 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 ARHGAP31Q2M1Z3 1444 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 ACEP12821 1306 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 MCM10Q7L590 875 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 RSPH6AQ9H0K4 717 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 SETBP1Q9Y6X0 1596 aa4.83□□□□□ -1.64
BRCA2-206ENST00000544455 MYH16Q9H6N6 1097 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 CFAP74Q9C0B2 1584 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 HSP90AB2PQ58FF8 381 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 ZNF428Q96B54 188 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 PHF23Q9BUL5 403 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-206ENST00000544455 DAXXQ9UER7 740 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-206ENST00000544455 WDR63Q8IWG1 891 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 APBB1O00213 710 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 MS4A1P11836 297 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 ZKSCAN2Q63HK3 967 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 ARHGEF40Q8TER5 1519 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 C8orf58Q8NAV2 365 aa4.82□□□□□ -1.64
BRCA2-206ENST00000544455 LTV1Q96GA3 475 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-206ENST00000544455 SLKQ9H2G2 1235 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-206ENST00000544455 MFAP1P55081 439 aaKnown RBP4.81□□□□□ -1.64
BRCA2-206ENST00000544455 MVPQ14764 893 aaKnown RBP4.81□□□□□ -1.64
BRCA2-206ENST00000544455 PDE3AQ14432 1141 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 SULT6B1Q6IMI4 303 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 MBIPQ9NS73 344 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 USHBP1Q8N6Y0 703 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 AMOTL2Q9Y2J4 779 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 ARXQ96QS3 562 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 DIP2BQ9P265 1576 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 XPCQ01831 940 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-206ENST00000544455 NLRP1Q9C000 1473 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 TMEM131LA2VDJ0 1609 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 SHPRHQ149N8 1683 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 IL13P35225 146 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 RTL5Q5HYW3 569 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-206ENST00000544455 ATF7IPQ6VMQ6 1270 aa4.81□□□□□ -1.64
BRCA2-206ENST00000544455 TNRQ92752 1358 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 IFT172Q9UG01 1749 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 CPS1P31327 1500 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 NGDNQ8NEJ9 315 aaKnown RBP4.8□□□□□ -1.64
BRCA2-206ENST00000544455 EIF4A2Q14240 407 aaKnown RBP4.8□□□□□ -1.64
BRCA2-206ENST00000544455 LNPKQ9C0E8 428 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 MYO3AQ8NEV4 1616 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 FCHSD2O94868 740 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 NSD2O96028 1365 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 RTN4Q9NQC3 1192 aaKnown RBP4.8□□□□□ -1.64
BRCA2-206ENST00000544455 NEURL4Q96JN8 1562 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 PPLO60437 1756 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 RICTORQ6R327 1708 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 TTC21BQ7Z4L5 1316 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 COL3A1P02461 1466 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-206ENST00000544455 KIF1BO60333 1816 aa4.8□□□□□ -1.64
BRCA2-206ENST00000544455 CCDC27Q2M243 656 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 TMEM2Q9UHN6 1383 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.79□□□□□ -1.64
BRCA2-206ENST00000544455 CCDC61Q9Y6R9 512 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 PTPRUQ92729 1446 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 TWISTNBQ3B726 338 aaPredicted RBP4.79□□□□□ -1.64
BRCA2-206ENST00000544455 LMOD2Q6P5Q4 547 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 ZC3H13Q5T200 1668 aaKnown RBP4.79□□□□□ -1.64
BRCA2-206ENST00000544455 ZFYVE9O95405 1425 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 USP19O94966 1318 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 RWDD1Q9H446 243 aaPredicted RBP4.79□□□□□ -1.64
BRCA2-206ENST00000544455 FOXD4L1Q9NU39 408 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 CLTCQ00610 1675 aaKnown RBP4.79□□□□□ -1.64
BRCA2-206ENST00000544455 TSPOAP1O95153 1857 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 PREX1Q8TCU6 1659 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 F6X3S4 739 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 NFE2L2Q16236 605 aa4.79□□□□□ -1.64
BRCA2-206ENST00000544455 ARHGEF28Q8N1W1 1705 aaKnown RBP4.78□□□□□ -1.64
BRCA2-206ENST00000544455 FRAT2O75474 233 aaPredicted RBP4.78□□□□□ -1.64
BRCA2-206ENST00000544455 NFKBIBQ15653 356 aa4.78□□□□□ -1.64
BRCA2-206ENST00000544455 ANKRD45Q5TZF3 282 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms