RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 MYO5BQ9ULV0 1848 aa17.32■□□□□ 0.36
PPME1-208ENST00000543525 MED14O60244 1454 aa17.32■□□□□ 0.36
PPME1-208ENST00000543525 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
PPME1-208ENST00000543525 CLTCQ00610 1675 aaKnown RBP17.31■□□□□ 0.36
PPME1-208ENST00000543525 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
PPME1-208ENST00000543525 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
PPME1-208ENST00000543525 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
PPME1-208ENST00000543525 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
PPME1-208ENST00000543525 GGNBP2Q9H3C7 697 aa17.29■□□□□ 0.36
PPME1-208ENST00000543525 FER1L4A9Z1Z3 1794 aa17.28■□□□□ 0.36
PPME1-208ENST00000543525 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
PPME1-208ENST00000543525 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
PPME1-208ENST00000543525 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.36
PPME1-208ENST00000543525 VIRMAQ69YN4 1812 aaKnown RBP17.27■□□□□ 0.36
PPME1-208ENST00000543525 ALKQ9UM73 1620 aa17.27■□□□□ 0.36
PPME1-208ENST00000543525 FYB1O15117 783 aa17.27■□□□□ 0.35
PPME1-208ENST00000543525 PLEKHF1Q96S99 279 aa17.27■□□□□ 0.35
PPME1-208ENST00000543525 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
PPME1-208ENST00000543525 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
PPME1-208ENST00000543525 RWDD1Q9H446 243 aaPredicted RBP17.26■□□□□ 0.35
PPME1-208ENST00000543525 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
PPME1-208ENST00000543525 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
PPME1-208ENST00000543525 ZMYM3Q14202 1370 aa17.26■□□□□ 0.35
PPME1-208ENST00000543525 CD163L1Q9NR16 1453 aa17.26■□□□□ 0.35
PPME1-208ENST00000543525 STRCQ7RTU9 1775 aa17.26■□□□□ 0.35
PPME1-208ENST00000543525 RLBP1P12271 317 aa17.25■□□□□ 0.35
PPME1-208ENST00000543525 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
PPME1-208ENST00000543525 IL16Q14005 1332 aa17.25■□□□□ 0.35
PPME1-208ENST00000543525 FBXO31Q5XUX0 539 aaPredicted RBP17.25■□□□□ 0.35
PPME1-208ENST00000543525 CDK19Q9BWU1 502 aa17.25■□□□□ 0.35
PPME1-208ENST00000543525 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
PPME1-208ENST00000543525 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
PPME1-208ENST00000543525 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
PPME1-208ENST00000543525 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
PPME1-208ENST00000543525 TNNQ9UQP3 1299 aa17.23■□□□□ 0.35
PPME1-208ENST00000543525 PCDHB15Q9Y5E8 787 aa17.23■□□□□ 0.35
PPME1-208ENST00000543525 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
PPME1-208ENST00000543525 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
PPME1-208ENST00000543525 REREQ9P2R6 1566 aa17.22■□□□□ 0.35
PPME1-208ENST00000543525 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
PPME1-208ENST00000543525 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
PPME1-208ENST00000543525 DLC1Q96QB1 1528 aa17.22■□□□□ 0.35
PPME1-208ENST00000543525 AGLP35573 1532 aa17.21■□□□□ 0.35
PPME1-208ENST00000543525 PNPLA6Q8IY17 1366 aa17.21■□□□□ 0.35
PPME1-208ENST00000543525 KIF20BQ96Q89 1820 aa17.21■□□□□ 0.35
PPME1-208ENST00000543525 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
PPME1-208ENST00000543525 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
PPME1-208ENST00000543525 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
PPME1-208ENST00000543525 CABP1Q9NZU7 370 aa17.2■□□□□ 0.34
PPME1-208ENST00000543525 PDZRN3Q9UPQ7 1066 aa17.2■□□□□ 0.34
PPME1-208ENST00000543525 RIPK4P57078 832 aa17.19■□□□□ 0.34
PPME1-208ENST00000543525 NFKBIBQ15653 356 aa17.19■□□□□ 0.34
PPME1-208ENST00000543525 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
PPME1-208ENST00000543525 USP19O94966 1318 aa17.18■□□□□ 0.34
PPME1-208ENST00000543525 ATP7BP35670 1465 aa17.18■□□□□ 0.34
PPME1-208ENST00000543525 FCHSD2O94868 740 aa17.17■□□□□ 0.34
PPME1-208ENST00000543525 CDC42BPGQ6DT37 1551 aa17.17■□□□□ 0.34
PPME1-208ENST00000543525 RIMS2Q9UQ26 1411 aa17.17■□□□□ 0.34
PPME1-208ENST00000543525 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
PPME1-208ENST00000543525 BECN1Q14457 450 aa17.16■□□□□ 0.34
PPME1-208ENST00000543525 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
PPME1-208ENST00000543525 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
PPME1-208ENST00000543525 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
PPME1-208ENST00000543525 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
PPME1-208ENST00000543525 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
PPME1-208ENST00000543525 TRIM27P14373 513 aa17.14■□□□□ 0.33
PPME1-208ENST00000543525 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
PPME1-208ENST00000543525 SEC24BO95487 1268 aa17.13■□□□□ 0.33
PPME1-208ENST00000543525 HDAC1Q13547 482 aaPredicted RBP17.13■□□□□ 0.33
PPME1-208ENST00000543525 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
PPME1-208ENST00000543525 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
PPME1-208ENST00000543525 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
PPME1-208ENST00000543525 ITPRIPQ8IWB1 547 aa17.12■□□□□ 0.33
PPME1-208ENST00000543525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.12■□□□□ 0.33
PPME1-208ENST00000543525 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
PPME1-208ENST00000543525 SETD1BQ9UPS6 1966 aaKnown RBP17.12■□□□□ 0.33
PPME1-208ENST00000543525 FAM135BQ49AJ0 1406 aa17.11■□□□□ 0.33
PPME1-208ENST00000543525 RSPH6AQ9H0K4 717 aa17.11■□□□□ 0.33
PPME1-208ENST00000543525 POLKQ9UBT6 870 aa17.11■□□□□ 0.33
PPME1-208ENST00000543525 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
PPME1-208ENST00000543525 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
PPME1-208ENST00000543525 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
PPME1-208ENST00000543525 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
PPME1-208ENST00000543525 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
PPME1-208ENST00000543525 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
PPME1-208ENST00000543525 WASLO00401 505 aaPredicted RBP17.09■□□□□ 0.33
PPME1-208ENST00000543525 GSE1Q14687 1217 aa17.09■□□□□ 0.33
PPME1-208ENST00000543525 NFE2L2Q16236 605 aa17.08■□□□□ 0.33
PPME1-208ENST00000543525 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.33
PPME1-208ENST00000543525 CPSF1Q10570 1443 aaKnown RBP17.08■□□□□ 0.32
PPME1-208ENST00000543525 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
PPME1-208ENST00000543525 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
PPME1-208ENST00000543525 BRPF1P55201 1214 aaPredicted RBP17.07■□□□□ 0.32
PPME1-208ENST00000543525 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
PPME1-208ENST00000543525 SIRT1Q96EB6 747 aa17.06■□□□□ 0.32
PPME1-208ENST00000543525 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
PPME1-208ENST00000543525 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
PPME1-208ENST00000543525 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
PPME1-208ENST00000543525 CDK12Q9NYV4 1490 aaPredicted RBP17.05■□□□□ 0.32
PPME1-208ENST00000543525 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms