RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 RUNDC1Q96C34 613 aa7.19□□□□□ -1.26
ZEB1-209ENST00000542879 TNNQ9UQP3 1299 aa7.19□□□□□ -1.26
ZEB1-209ENST00000542879 A2ML1A8K2U0 1454 aa7.19□□□□□ -1.26
ZEB1-209ENST00000542879 AFAP1Q8N556 730 aa7.19□□□□□ -1.26
ZEB1-209ENST00000542879 CFAP65Q6ZU64 1925 aaKnown RBP7.19□□□□□ -1.26
ZEB1-209ENST00000542879 PDZRN3Q9UPQ7 1066 aa7.19□□□□□ -1.26
ZEB1-209ENST00000542879 PTPRMP28827 1452 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 STRCP1A6NGW2 1772 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 TBC1D2Q9BYX2 928 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 TULP4Q9NRJ4 1543 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 RSPH6AQ9H0K4 717 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 CPS1P31327 1500 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 A0A0U1RQG5 324 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-209ENST00000542879 NEXMIFQ5QGS0 1516 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 VSIG10Q8N0Z9 540 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 TCP11L2Q8N4U5 519 aa7.18□□□□□ -1.26
ZEB1-209ENST00000542879 LTBP4Q8N2S1 1624 aa7.17□□□□□ -1.26
ZEB1-209ENST00000542879 DLC1Q96QB1 1528 aa7.17□□□□□ -1.26
ZEB1-209ENST00000542879 COL3A1P02461 1466 aaPredicted RBP7.17□□□□□ -1.26
ZEB1-209ENST00000542879 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
ZEB1-209ENST00000542879 NCOA3Q9Y6Q9 1424 aa7.17□□□□□ -1.26
ZEB1-209ENST00000542879 SLKQ9H2G2 1235 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-209ENST00000542879 CANXP27824 592 aaKnown RBP7.16□□□□□ -1.26
ZEB1-209ENST00000542879 MVPQ14764 893 aaKnown RBP7.16□□□□□ -1.26
ZEB1-209ENST00000542879 RRAGDQ9NQL2 400 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-209ENST00000542879 COL22A1Q8NFW1 1626 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-209ENST00000542879 L1TD1Q5T7N2 865 aaKnown RBP7.15□□□□□ -1.26
ZEB1-209ENST00000542879 NSD2O96028 1365 aa7.15□□□□□ -1.26
ZEB1-209ENST00000542879 MORC1Q86VD1 984 aa7.15□□□□□ -1.26
ZEB1-209ENST00000542879 RWDD1Q9H446 243 aaPredicted RBP7.15□□□□□ -1.26
ZEB1-209ENST00000542879 RRP7AQ9Y3A4 280 aaKnown RBP7.15□□□□□ -1.26
ZEB1-209ENST00000542879 YEATS2Q9ULM3 1422 aa7.15□□□□□ -1.26
ZEB1-209ENST00000542879 ZNF692Q9BU19 519 aaPredicted RBP7.15□□□□□ -1.27
ZEB1-209ENST00000542879 C14orf93Q9H972 538 aaKnown RBP7.15□□□□□ -1.27
ZEB1-209ENST00000542879 KIF20BQ96Q89 1820 aa7.15□□□□□ -1.27
ZEB1-209ENST00000542879 KIF3BO15066 747 aa7.14□□□□□ -1.27
ZEB1-209ENST00000542879 CT47B1P0C2W7 299 aaPredicted RBP7.14□□□□□ -1.27
ZEB1-209ENST00000542879 PUS7Q96PZ0 661 aaKnown RBP7.14□□□□□ -1.27
ZEB1-209ENST00000542879 DDIT3P35638 169 aa7.14□□□□□ -1.27
ZEB1-209ENST00000542879 SLC12A5Q9H2X9 1139 aa7.14□□□□□ -1.27
ZEB1-209ENST00000542879 PHRF1Q9P1Y6 1649 aaKnown RBP7.14□□□□□ -1.27
ZEB1-209ENST00000542879 MCM4P33991 863 aa7.14□□□□□ -1.27
ZEB1-209ENST00000542879 HDAC1Q13547 482 aaPredicted RBP7.14□□□□□ -1.27
ZEB1-209ENST00000542879 ANKRD36BQ8N2N9 1353 aa7.14□□□□□ -1.27
ZEB1-209ENST00000542879 CDC42BPGQ6DT37 1551 aa7.14□□□□□ -1.27
ZEB1-209ENST00000542879 MST1RQ04912 1400 aa7.13□□□□□ -1.27
ZEB1-209ENST00000542879 XRCC6P12956 609 aaKnown RBP eCLIP7.13□□□□□ -1.271e-8■■■■■ 35.6
ZEB1-209ENST00000542879 MTHFSP49914 203 aa7.13□□□□□ -1.27
ZEB1-209ENST00000542879 BCL2L13Q9BXK5 485 aa7.13□□□□□ -1.27
ZEB1-209ENST00000542879 UPF2Q9HAU5 1272 aaKnown RBP7.13□□□□□ -1.27
ZEB1-209ENST00000542879 MYH16Q9H6N6 1097 aa7.13□□□□□ -1.27
ZEB1-209ENST00000542879 NHSL1Q5SYE7 1610 aa7.13□□□□□ -1.27
ZEB1-209ENST00000542879 NEUROD2Q15784 382 aa7.13□□□□□ -1.27
ZEB1-209ENST00000542879 PLEKHF1Q96S99 279 aa7.13□□□□□ -1.27
ZEB1-209ENST00000542879 ZKSCAN2Q63HK3 967 aa7.12□□□□□ -1.27
ZEB1-209ENST00000542879 SMC5Q8IY18 1101 aa7.12□□□□□ -1.27
ZEB1-209ENST00000542879 DZIP1LQ8IYY4 767 aaKnown RBP7.12□□□□□ -1.27
ZEB1-209ENST00000542879 C22orf23Q9BZE7 217 aa7.12□□□□□ -1.27
ZEB1-209ENST00000542879 CHMP5Q9NZZ3 219 aa7.12□□□□□ -1.27
ZEB1-209ENST00000542879 ABCC11Q96J66 1382 aa7.11□□□□□ -1.27
ZEB1-209ENST00000542879 TRIM27P14373 513 aa7.11□□□□□ -1.27
ZEB1-209ENST00000542879 TNNT2P45379 298 aaPredicted RBP7.11□□□□□ -1.27
ZEB1-209ENST00000542879 TRIM35Q9UPQ4 493 aa7.11□□□□□ -1.27
ZEB1-209ENST00000542879 TRAK1Q9UPV9 953 aa7.11□□□□□ -1.27
ZEB1-209ENST00000542879 DLG5Q8TDM6 1919 aa7.11□□□□□ -1.27
ZEB1-209ENST00000542879 CD163L1Q9NR16 1453 aa7.11□□□□□ -1.27
ZEB1-209ENST00000542879 MARF1Q9Y4F3 1742 aaKnown RBP7.1□□□□□ -1.27
ZEB1-209ENST00000542879 RBM25P49756 843 aaKnown RBP7.1□□□□□ -1.27
ZEB1-209ENST00000542879 CFAP53Q96M91 514 aa7.1□□□□□ -1.27
ZEB1-209ENST00000542879 IL16Q14005 1332 aa7.1□□□□□ -1.27
ZEB1-209ENST00000542879 RPGRIP1LQ68CZ1 1315 aa7.1□□□□□ -1.27
ZEB1-209ENST00000542879 GOLGA6L3A6NEY3 463 aa7.1□□□□□ -1.27
ZEB1-209ENST00000542879 TECPR2O15040 1411 aa7.1□□□□□ -1.27
ZEB1-209ENST00000542879 SNX21Q969T3 373 aa7.1□□□□□ -1.27
ZEB1-209ENST00000542879 PANK2Q9BZ23 570 aa7.1□□□□□ -1.27
ZEB1-209ENST00000542879 ITSN1Q15811 1721 aa7.1□□□□□ -1.27
ZEB1-209ENST00000542879 TSR2Q969E8 191 aaKnown RBP7.09□□□□□ -1.27
ZEB1-209ENST00000542879 ZBTB40Q9NUA8 1239 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 NALCNQ8IZF0 1738 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 TRAK2O60296 914 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 CLCN1P35523 988 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 EXOSC9Q06265 439 aaKnown RBP7.09□□□□□ -1.27
ZEB1-209ENST00000542879 ATF7IPQ6VMQ6 1270 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 SSH1Q8WYL5 1049 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 DDX19BQ9UMR2 479 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 KIF1AQ12756 1690 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 ABCA3Q99758 1704 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.09□□□□□ -1.27
ZEB1-209ENST00000542879 MAP2P11137 1827 aaKnown RBP7.09□□□□□ -1.27
ZEB1-209ENST00000542879 AK9Q5TCS8 1911 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 TMPOP42166 694 aaKnown RBP7.09□□□□□ -1.27
ZEB1-209ENST00000542879 A0A1W2PP64 1363 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 PPIP5K1Q6PFW1 1433 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 NRKQ7Z2Y5 1582 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 FMN2Q9NZ56 1722 aa7.09□□□□□ -1.27
ZEB1-209ENST00000542879 PNPLA6Q8IY17 1366 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 MFAP1P55081 439 aaKnown RBP7.08□□□□□ -1.28
ZEB1-209ENST00000542879 NUCB1Q02818 461 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 TMEM132EQ6IEE7 984 aa7.08□□□□□ -1.28
ZEB1-209ENST00000542879 FTSJ3Q8IY81 847 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms