RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 DSG2Q14126 1118 aa10.88□□□□□ -0.67
AC005840.3-201ENST00000541888 POLR3GLQ9BT43 218 aa10.88□□□□□ -0.67
AC005840.3-201ENST00000541888 CRISPLD2Q9H0B8 497 aa10.88□□□□□ -0.67
AC005840.3-201ENST00000541888 USP47Q96K76 1375 aa10.88□□□□□ -0.67
AC005840.3-201ENST00000541888 PLPP6Q8IY26 295 aa10.87□□□□□ -0.67
AC005840.3-201ENST00000541888 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
AC005840.3-201ENST00000541888 SPATA31D1Q6ZQQ2 1576 aa10.86□□□□□ -0.67
AC005840.3-201ENST00000541888 CFAP70Q5T0N1 1121 aa10.86□□□□□ -0.67
AC005840.3-201ENST00000541888 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.67
AC005840.3-201ENST00000541888 NEXMIFQ5QGS0 1516 aa10.86□□□□□ -0.67
AC005840.3-201ENST00000541888 NCKAP5LQ9HCH0 1330 aa10.86□□□□□ -0.67
AC005840.3-201ENST00000541888 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
AC005840.3-201ENST00000541888 ST20-MTHFSA0A0A6YYL1 179 aa10.84□□□□□ -0.67
AC005840.3-201ENST00000541888 PDE4AP27815 886 aa10.84□□□□□ -0.67
AC005840.3-201ENST00000541888 TMEM132EQ6IEE7 984 aa10.84□□□□□ -0.67
AC005840.3-201ENST00000541888 ERBB3P21860 1342 aa10.84□□□□□ -0.67
AC005840.3-201ENST00000541888 WASHC2AQ641Q2 1341 aa10.84□□□□□ -0.67
AC005840.3-201ENST00000541888 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
AC005840.3-201ENST00000541888 CNGB1Q14028 1251 aaPredicted RBP10.83□□□□□ -0.68
AC005840.3-201ENST00000541888 TNRQ92752 1358 aa10.83□□□□□ -0.68
AC005840.3-201ENST00000541888 PCDHGA4Q9Y5G9 962 aa10.82□□□□□ -0.68
AC005840.3-201ENST00000541888 A2ML1A8K2U0 1454 aa10.82□□□□□ -0.68
AC005840.3-201ENST00000541888 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
AC005840.3-201ENST00000541888 SLC52A1Q9NWF4 448 aa10.81□□□□□ -0.68
AC005840.3-201ENST00000541888 UBR1Q8IWV7 1749 aa10.81□□□□□ -0.68
AC005840.3-201ENST00000541888 MYOM2P54296 1465 aa10.81□□□□□ -0.68
AC005840.3-201ENST00000541888 IQGAP1P46940 1657 aa10.81□□□□□ -0.68
AC005840.3-201ENST00000541888 PTCD2Q8WV60 388 aaKnown RBP10.8□□□□□ -0.68
AC005840.3-201ENST00000541888 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
AC005840.3-201ENST00000541888 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
AC005840.3-201ENST00000541888 POLR1AO95602 1720 aaPredicted RBP10.8□□□□□ -0.68
AC005840.3-201ENST00000541888 KIF7Q2M1P5 1343 aa10.8□□□□□ -0.68
AC005840.3-201ENST00000541888 NEURL4Q96JN8 1562 aa10.8□□□□□ -0.68
AC005840.3-201ENST00000541888 PIK3C2GO75747 1445 aa10.8□□□□□ -0.68
AC005840.3-201ENST00000541888 NUDT7P0C024 238 aa10.79□□□□□ -0.68
AC005840.3-201ENST00000541888 MYO3AQ8NEV4 1616 aa10.79□□□□□ -0.68
AC005840.3-201ENST00000541888 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
AC005840.3-201ENST00000541888 PPP1R15BQ5SWA1 713 aa10.79□□□□□ -0.68
AC005840.3-201ENST00000541888 NRXN1Q9ULB1 1477 aa10.79□□□□□ -0.68
AC005840.3-201ENST00000541888 SAFB2Q14151 953 aaKnown RBP eCLIP10.78□□□□□ -0.68
AC005840.3-201ENST00000541888 PAXIP1Q6ZW49 1069 aaPredicted RBP10.78□□□□□ -0.68
AC005840.3-201ENST00000541888 PLSCR2Q9NRY7 297 aa10.78□□□□□ -0.68
AC005840.3-201ENST00000541888 STK26Q9P289 416 aa10.78□□□□□ -0.68
AC005840.3-201ENST00000541888 TRAK1Q9UPV9 953 aa10.78□□□□□ -0.68
AC005840.3-201ENST00000541888 RIMS2Q9UQ26 1411 aa10.78□□□□□ -0.68
AC005840.3-201ENST00000541888 CCDC7Q96M83 1385 aa10.77□□□□□ -0.68
AC005840.3-201ENST00000541888 CFAP44Q96MT7 982 aa10.77□□□□□ -0.68
AC005840.3-201ENST00000541888 GPRASP1Q5JY77 1395 aa10.77□□□□□ -0.69
AC005840.3-201ENST00000541888 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.69
AC005840.3-201ENST00000541888 KIAA1210Q9ULL0 1709 aa10.77□□□□□ -0.69
AC005840.3-201ENST00000541888 LAMC1P11047 1609 aa10.77□□□□□ -0.69
AC005840.3-201ENST00000541888 ASXL1Q8IXJ9 1541 aa10.77□□□□□ -0.69
AC005840.3-201ENST00000541888 CENPBP07199 599 aaPredicted RBP10.76□□□□□ -0.69
AC005840.3-201ENST00000541888 BCANQ96GW7 911 aa10.76□□□□□ -0.69
AC005840.3-201ENST00000541888 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
AC005840.3-201ENST00000541888 ADGRB1O14514 1584 aa10.75□□□□□ -0.69
AC005840.3-201ENST00000541888 NRXN3Q9Y4C0 1643 aa10.75□□□□□ -0.69
AC005840.3-201ENST00000541888 LTKP29376 864 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 MFSD10Q14728 455 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 TESK2Q96S53 571 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 ZFYVE9O95405 1425 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 ALKQ9UM73 1620 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 KRTAP3-3Q9BYR6 98 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 C14orf93Q9H972 538 aaKnown RBP10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 PTPRMP28827 1452 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 SCAF11Q99590 1463 aaKnown RBP10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 RPGRIP1LQ68CZ1 1315 aa10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 ARHGEF28Q8N1W1 1705 aaKnown RBP10.74□□□□□ -0.69
AC005840.3-201ENST00000541888 QRICH2Q9H0J4 1663 aa10.73□□□□□ -0.69
AC005840.3-201ENST00000541888 KDM4FA0A1W2PPD8 638 aa10.73□□□□□ -0.69
AC005840.3-201ENST00000541888 SETD1AO15047 1707 aaKnown RBP10.73□□□□□ -0.69
AC005840.3-201ENST00000541888 TBC1D12O60347 775 aa10.72□□□□□ -0.69
AC005840.3-201ENST00000541888 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
AC005840.3-201ENST00000541888 CEP170BQ9Y4F5 1589 aaPredicted RBP10.72□□□□□ -0.69
AC005840.3-201ENST00000541888 ZNF687Q8N1G0 1237 aa10.72□□□□□ -0.69
AC005840.3-201ENST00000541888 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
AC005840.3-201ENST00000541888 YTHDC1Q96MU7 727 aaKnown RBP10.72□□□□□ -0.69
AC005840.3-201ENST00000541888 SLC26A8Q96RN1 970 aa10.72□□□□□ -0.69
AC005840.3-201ENST00000541888 TMEM2Q9UHN6 1383 aa10.72□□□□□ -0.69
AC005840.3-201ENST00000541888 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
AC005840.3-201ENST00000541888 NLRP1Q9C000 1473 aa10.71□□□□□ -0.7
AC005840.3-201ENST00000541888 SETBP1Q9Y6X0 1596 aa10.71□□□□□ -0.7
AC005840.3-201ENST00000541888 TXNDC2Q86VQ3 553 aa10.7□□□□□ -0.7
AC005840.3-201ENST00000541888 METP08581 1390 aa10.7□□□□□ -0.7
AC005840.3-201ENST00000541888 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
AC005840.3-201ENST00000541888 WAPLQ7Z5K2 1190 aa10.68□□□□□ -0.7
AC005840.3-201ENST00000541888 STAC3Q96MF2 364 aa10.68□□□□□ -0.7
AC005840.3-201ENST00000541888 MYOM1P52179 1685 aa10.68□□□□□ -0.7
AC005840.3-201ENST00000541888 PLEKHH1Q9ULM0 1364 aa10.68□□□□□ -0.7
AC005840.3-201ENST00000541888 MINK1Q8N4C8 1332 aaPredicted RBP10.68□□□□□ -0.7
AC005840.3-201ENST00000541888 YTHDC2Q9H6S0 1430 aaKnown RBP10.67□□□□□ -0.7
AC005840.3-201ENST00000541888 CENPJQ9HC77 1338 aaPredicted RBP10.67□□□□□ -0.7
AC005840.3-201ENST00000541888 PRAM1Q96QH2 718 aa10.67□□□□□ -0.7
AC005840.3-201ENST00000541888 ZNF142P52746 1687 aaPredicted RBP10.66□□□□□ -0.7
AC005840.3-201ENST00000541888 TMF1P82094 1093 aa10.66□□□□□ -0.7
AC005840.3-201ENST00000541888 EIF3AQ14152 1382 aaKnown RBP10.66□□□□□ -0.7
AC005840.3-201ENST00000541888 HSPA2P54652 639 aa10.65□□□□□ -0.7
AC005840.3-201ENST00000541888 SPNS2Q8IVW8 549 aa10.65□□□□□ -0.7
AC005840.3-201ENST00000541888 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms