RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
NUP85-203ENST00000540768 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
NUP85-203ENST00000540768 SETD1AO15047 1707 aaKnown RBP12.87□□□□□ -0.35
NUP85-203ENST00000540768 FYB1O15117 783 aa12.86□□□□□ -0.35
NUP85-203ENST00000540768 PIP4K2BP78356 416 aa12.86□□□□□ -0.35
NUP85-203ENST00000540768 TERF2IPQ9NYB0 399 aa12.86□□□□□ -0.35
NUP85-203ENST00000540768 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
NUP85-203ENST00000540768 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
NUP85-203ENST00000540768 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
NUP85-203ENST00000540768 TOM1O60784 492 aa12.85□□□□□ -0.35
NUP85-203ENST00000540768 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
NUP85-203ENST00000540768 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
NUP85-203ENST00000540768 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
NUP85-203ENST00000540768 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
NUP85-203ENST00000540768 PLEKHF1Q96S99 279 aa12.84□□□□□ -0.35
NUP85-203ENST00000540768 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
NUP85-203ENST00000540768 SOCS7O14512 581 aa12.83□□□□□ -0.36
NUP85-203ENST00000540768 NPHP4O75161 1426 aaPredicted RBP12.82□□□□□ -0.36
NUP85-203ENST00000540768 HDGFL2Q7Z4V5 671 aaPredicted RBP12.82□□□□□ -0.36
NUP85-203ENST00000540768 PNPLA6Q8IY17 1366 aa12.82□□□□□ -0.36
NUP85-203ENST00000540768 HSPA1LP34931 641 aa12.82□□□□□ -0.36
NUP85-203ENST00000540768 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
NUP85-203ENST00000540768 CABP1Q9NZU7 370 aa12.82□□□□□ -0.36
NUP85-203ENST00000540768 NRXN3Q9Y4C0 1643 aa12.82□□□□□ -0.36
NUP85-203ENST00000540768 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
NUP85-203ENST00000540768 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
NUP85-203ENST00000540768 IGHDP01880 384 aa12.8□□□□□ -0.36
NUP85-203ENST00000540768 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
NUP85-203ENST00000540768 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
NUP85-203ENST00000540768 ATP7BP35670 1465 aa12.8□□□□□ -0.36
NUP85-203ENST00000540768 CPS1P31327 1500 aa12.8□□□□□ -0.36
NUP85-203ENST00000540768 TXNDC2Q86VQ3 553 aa12.8□□□□□ -0.36
NUP85-203ENST00000540768 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
NUP85-203ENST00000540768 COG6Q9Y2V7 657 aa12.8□□□□□ -0.36
NUP85-203ENST00000540768 TMPOP42166 694 aaKnown RBP12.79□□□□□ -0.36
NUP85-203ENST00000540768 C8orf34Q49A92 452 aa12.79□□□□□ -0.36
NUP85-203ENST00000540768 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
NUP85-203ENST00000540768 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
NUP85-203ENST00000540768 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
NUP85-203ENST00000540768 LTKP29376 864 aa12.78□□□□□ -0.36
NUP85-203ENST00000540768 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
NUP85-203ENST00000540768 CDC42BPGQ6DT37 1551 aa12.78□□□□□ -0.36
NUP85-203ENST00000540768 AAMPQ13685 434 aa12.78□□□□□ -0.36
NUP85-203ENST00000540768 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
NUP85-203ENST00000540768 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.37
NUP85-203ENST00000540768 RLBP1P12271 317 aa12.77□□□□□ -0.37
NUP85-203ENST00000540768 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
NUP85-203ENST00000540768 EID1Q9Y6B2 187 aa12.77□□□□□ -0.37
NUP85-203ENST00000540768 METP08581 1390 aa12.77□□□□□ -0.37
NUP85-203ENST00000540768 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.37
NUP85-203ENST00000540768 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
NUP85-203ENST00000540768 TNNQ9UQP3 1299 aa12.76□□□□□ -0.37
NUP85-203ENST00000540768 IL16Q14005 1332 aa12.76□□□□□ -0.37
NUP85-203ENST00000540768 WASLO00401 505 aaPredicted RBP12.75□□□□□ -0.37
NUP85-203ENST00000540768 RGS3P49796 1198 aa12.75□□□□□ -0.37
NUP85-203ENST00000540768 SIRT1Q96EB6 747 aa12.75□□□□□ -0.37
NUP85-203ENST00000540768 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
NUP85-203ENST00000540768 KNDC1Q76NI1 1749 aa12.75□□□□□ -0.37
NUP85-203ENST00000540768 TECPR2O15040 1411 aa12.75□□□□□ -0.37
NUP85-203ENST00000540768 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
NUP85-203ENST00000540768 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
NUP85-203ENST00000540768 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
NUP85-203ENST00000540768 FAM135BQ49AJ0 1406 aa12.74□□□□□ -0.37
NUP85-203ENST00000540768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
NUP85-203ENST00000540768 PNNQ9H307 717 aaKnown RBP12.74□□□□□ -0.37
NUP85-203ENST00000540768 FCHSD2O94868 740 aa12.73□□□□□ -0.37
NUP85-203ENST00000540768 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
NUP85-203ENST00000540768 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
NUP85-203ENST00000540768 EDC4Q6P2E9 1401 aaKnown RBP12.73□□□□□ -0.37
NUP85-203ENST00000540768 PPIP5K1Q6PFW1 1433 aa12.73□□□□□ -0.37
NUP85-203ENST00000540768 RIPK4P57078 832 aa12.72□□□□□ -0.37
NUP85-203ENST00000540768 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
NUP85-203ENST00000540768 NBR1Q14596 966 aa12.72□□□□□ -0.37
NUP85-203ENST00000540768 LRRC7Q96NW7 1537 aa12.72□□□□□ -0.37
NUP85-203ENST00000540768 FBLN1P23142 703 aa12.72□□□□□ -0.37
NUP85-203ENST00000540768 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
NUP85-203ENST00000540768 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
NUP85-203ENST00000540768 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
NUP85-203ENST00000540768 TMEM2Q9UHN6 1383 aa12.71□□□□□ -0.37
NUP85-203ENST00000540768 HDGFP51858 240 aaKnown RBP12.71□□□□□ -0.37
NUP85-203ENST00000540768 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
NUP85-203ENST00000540768 MAP2P11137 1827 aaKnown RBP12.71□□□□□ -0.38
NUP85-203ENST00000540768 UBR1Q8IWV7 1749 aa12.7□□□□□ -0.38
NUP85-203ENST00000540768 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
NUP85-203ENST00000540768 MON2Q7Z3U7 1717 aa12.7□□□□□ -0.38
NUP85-203ENST00000540768 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
NUP85-203ENST00000540768 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
NUP85-203ENST00000540768 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
NUP85-203ENST00000540768 SLC26A8Q96RN1 970 aa12.7□□□□□ -0.38
NUP85-203ENST00000540768 ARHGAP23Q9P227 1491 aa12.69□□□□□ -0.38
NUP85-203ENST00000540768 NME9Q86XW9 330 aa12.69□□□□□ -0.38
NUP85-203ENST00000540768 DZIP1LQ8IYY4 767 aaKnown RBP12.69□□□□□ -0.38
NUP85-203ENST00000540768 SLIT1O75093 1534 aa12.69□□□□□ -0.38
NUP85-203ENST00000540768 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
NUP85-203ENST00000540768 IL13P35225 146 aa12.68□□□□□ -0.38
NUP85-203ENST00000540768 SMC4Q9NTJ3 1288 aa12.68□□□□□ -0.38
NUP85-203ENST00000540768 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
NUP85-203ENST00000540768 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
NUP85-203ENST00000540768 CDK12Q9NYV4 1490 aaPredicted RBP12.68□□□□□ -0.38
NUP85-203ENST00000540768 AKAP12Q02952 1782 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms