RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 SPOCK2Q92563 424 aa13.3□□□□□ -0.28
MDH1-215ENST00000539945 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
MDH1-215ENST00000539945 CDCA8Q53HL2 280 aa13.3□□□□□ -0.28
MDH1-215ENST00000539945 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
MDH1-215ENST00000539945 SBNO2Q9Y2G9 1366 aa13.29□□□□□ -0.28
MDH1-215ENST00000539945 YTHDC1Q96MU7 727 aaKnown RBP13.29□□□□□ -0.28
MDH1-215ENST00000539945 PRKRIP1Q9H875 184 aaPredicted RBP13.29□□□□□ -0.28
MDH1-215ENST00000539945 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
MDH1-215ENST00000539945 RIMS2Q9UQ26 1411 aa13.28□□□□□ -0.28
MDH1-215ENST00000539945 C3P01024 1663 aa13.27□□□□□ -0.28
MDH1-215ENST00000539945 NLRP1Q9C000 1473 aa13.27□□□□□ -0.28
MDH1-215ENST00000539945 TMEM132EQ6IEE7 984 aa13.27□□□□□ -0.29
MDH1-215ENST00000539945 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.26□□□□□ -0.29
MDH1-215ENST00000539945 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
MDH1-215ENST00000539945 HDGFP51858 240 aaKnown RBP13.25□□□□□ -0.29
MDH1-215ENST00000539945 ASXL1Q8IXJ9 1541 aa13.25□□□□□ -0.29
MDH1-215ENST00000539945 UBR1Q8IWV7 1749 aa13.25□□□□□ -0.29
MDH1-215ENST00000539945 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
MDH1-215ENST00000539945 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
MDH1-215ENST00000539945 ALKQ9UM73 1620 aa13.24□□□□□ -0.29
MDH1-215ENST00000539945 KTN1Q86UP2 1357 aaKnown RBP13.23□□□□□ -0.29
MDH1-215ENST00000539945 RNF166Q96A37 237 aaPredicted RBP13.23□□□□□ -0.29
MDH1-215ENST00000539945 ARHGEF28Q8N1W1 1705 aaKnown RBP13.23□□□□□ -0.29
MDH1-215ENST00000539945 TMEM2Q9UHN6 1383 aa13.22□□□□□ -0.29
MDH1-215ENST00000539945 PER1O15534 1290 aaPredicted RBP13.22□□□□□ -0.29
MDH1-215ENST00000539945 QRICH2Q9H0J4 1663 aa13.22□□□□□ -0.29
MDH1-215ENST00000539945 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
MDH1-215ENST00000539945 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.29
MDH1-215ENST00000539945 PANK3Q9H999 370 aa13.21□□□□□ -0.3
MDH1-215ENST00000539945 RALBP1Q15311 655 aa13.2□□□□□ -0.3
MDH1-215ENST00000539945 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
MDH1-215ENST00000539945 PTPRMP28827 1452 aa13.19□□□□□ -0.3
MDH1-215ENST00000539945 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
MDH1-215ENST00000539945 ADAMTSL3P82987 1691 aa13.19□□□□□ -0.3
MDH1-215ENST00000539945 NRXN3Q9Y4C0 1643 aa13.19□□□□□ -0.3
MDH1-215ENST00000539945 MYOM1P52179 1685 aa13.19□□□□□ -0.3
MDH1-215ENST00000539945 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
MDH1-215ENST00000539945 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
MDH1-215ENST00000539945 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
MDH1-215ENST00000539945 STK26Q9P289 416 aa13.17□□□□□ -0.3
MDH1-215ENST00000539945 SLIT1O75093 1534 aa13.17□□□□□ -0.3
MDH1-215ENST00000539945 RIMS1Q86UR5 1692 aaKnown RBP13.17□□□□□ -0.3
MDH1-215ENST00000539945 ARHGAP23Q9P227 1491 aa13.16□□□□□ -0.3
MDH1-215ENST00000539945 PTGER2P43116 358 aa13.16□□□□□ -0.3
MDH1-215ENST00000539945 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
MDH1-215ENST00000539945 ABCC11Q96J66 1382 aa13.16□□□□□ -0.3
MDH1-215ENST00000539945 EVC2Q86UK5 1308 aa13.16□□□□□ -0.3
MDH1-215ENST00000539945 CCDC184Q52MB2 194 aa13.15□□□□□ -0.3
MDH1-215ENST00000539945 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.3
MDH1-215ENST00000539945 MRS2Q9HD23 443 aa13.15□□□□□ -0.3
MDH1-215ENST00000539945 PLEKHG1Q9ULL1 1385 aa13.15□□□□□ -0.3
MDH1-215ENST00000539945 KNSTRNQ9Y448 316 aa13.14□□□□□ -0.31
MDH1-215ENST00000539945 EID1Q9Y6B2 187 aa13.14□□□□□ -0.31
MDH1-215ENST00000539945 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
MDH1-215ENST00000539945 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
MDH1-215ENST00000539945 LTKP29376 864 aa13.13□□□□□ -0.31
MDH1-215ENST00000539945 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
MDH1-215ENST00000539945 PRAM1Q96QH2 718 aa13.13□□□□□ -0.31
MDH1-215ENST00000539945 NPC1L1Q9UHC9 1359 aa13.13□□□□□ -0.31
MDH1-215ENST00000539945 TXNDC2Q86VQ3 553 aa13.13□□□□□ -0.31
MDH1-215ENST00000539945 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
MDH1-215ENST00000539945 SIRT1Q96EB6 747 aa13.13□□□□□ -0.31
MDH1-215ENST00000539945 POGKQ9P215 609 aa13.13□□□□□ -0.31
MDH1-215ENST00000539945 METP08581 1390 aa13.13□□□□□ -0.31
MDH1-215ENST00000539945 TECPR2O15040 1411 aa13.12□□□□□ -0.31
MDH1-215ENST00000539945 ADAMTS13Q76LX8 1427 aa13.12□□□□□ -0.31
MDH1-215ENST00000539945 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
MDH1-215ENST00000539945 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
MDH1-215ENST00000539945 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
MDH1-215ENST00000539945 KNDC1Q76NI1 1749 aa13.11□□□□□ -0.31
MDH1-215ENST00000539945 MED14O60244 1454 aa13.11□□□□□ -0.31
MDH1-215ENST00000539945 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
MDH1-215ENST00000539945 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
MDH1-215ENST00000539945 FAM135BQ49AJ0 1406 aa13.11□□□□□ -0.31
MDH1-215ENST00000539945 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
MDH1-215ENST00000539945 BCANQ96GW7 911 aa13.1□□□□□ -0.31
MDH1-215ENST00000539945 NINLQ9Y2I6 1382 aa13.09□□□□□ -0.31
MDH1-215ENST00000539945 ZNF142P52746 1687 aaPredicted RBP13.09□□□□□ -0.31
MDH1-215ENST00000539945 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.31
MDH1-215ENST00000539945 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
MDH1-215ENST00000539945 NLRP13Q86W25 1043 aa13.09□□□□□ -0.31
MDH1-215ENST00000539945 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
MDH1-215ENST00000539945 CPS1P31327 1500 aa13.08□□□□□ -0.31
MDH1-215ENST00000539945 TMC1Q8TDI8 760 aa13.08□□□□□ -0.32
MDH1-215ENST00000539945 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
MDH1-215ENST00000539945 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.32
MDH1-215ENST00000539945 TBX22Q9Y458 520 aa13.08□□□□□ -0.32
MDH1-215ENST00000539945 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
MDH1-215ENST00000539945 ATAD2Q6PL18 1390 aa13.08□□□□□ -0.32
MDH1-215ENST00000539945 SOX12O15370 315 aa13.07□□□□□ -0.32
MDH1-215ENST00000539945 WAPLQ7Z5K2 1190 aa13.07□□□□□ -0.32
MDH1-215ENST00000539945 PNISRQ8TF01 805 aaKnown RBP13.07□□□□□ -0.32
MDH1-215ENST00000539945 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
MDH1-215ENST00000539945 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
MDH1-215ENST00000539945 FAM9BQ8IZU0 186 aa13.06□□□□□ -0.32
MDH1-215ENST00000539945 PLEKHH1Q9ULM0 1364 aa13.06□□□□□ -0.32
MDH1-215ENST00000539945 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
MDH1-215ENST00000539945 ANKRD36BQ8N2N9 1353 aa13.05□□□□□ -0.32
MDH1-215ENST00000539945 USP32Q8NFA0 1604 aa13.05□□□□□ -0.32
MDH1-215ENST00000539945 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms