RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 MVPQ14764 893 aaKnown RBP15.44■□□□□ 0.06
CPSF7-218ENST00000537641 TBC1D2Q9BYX2 928 aa15.43■□□□□ 0.06
CPSF7-218ENST00000537641 RSPH6AQ9H0K4 717 aa15.43■□□□□ 0.06
CPSF7-218ENST00000537641 SLKQ9H2G2 1235 aaPredicted RBP15.43■□□□□ 0.06
CPSF7-218ENST00000537641 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
CPSF7-218ENST00000537641 ZKSCAN2Q63HK3 967 aa15.43■□□□□ 0.06
CPSF7-218ENST00000537641 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.43■□□□□ 0.06
CPSF7-218ENST00000537641 RRP7AQ9Y3A4 280 aaKnown RBP15.42■□□□□ 0.06
CPSF7-218ENST00000537641 YTHDC2Q9H6S0 1430 aaKnown RBP15.42■□□□□ 0.06
CPSF7-218ENST00000537641 FBXO31Q5XUX0 539 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-218ENST00000537641 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
CPSF7-218ENST00000537641 TNNQ9UQP3 1299 aa15.4■□□□□ 0.06
CPSF7-218ENST00000537641 MTHFSP49914 203 aa15.4■□□□□ 0.06
CPSF7-218ENST00000537641 DZIP1LQ8IYY4 767 aaKnown RBP15.4■□□□□ 0.06
CPSF7-218ENST00000537641 SETD1AO15047 1707 aaKnown RBP15.4■□□□□ 0.06
CPSF7-218ENST00000537641 ABCC11Q96J66 1382 aa15.39■□□□□ 0.05
CPSF7-218ENST00000537641 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
CPSF7-218ENST00000537641 A2ML1A8K2U0 1454 aa15.38■□□□□ 0.05
CPSF7-218ENST00000537641 ATAD2Q6PL18 1390 aa15.38■□□□□ 0.05
CPSF7-218ENST00000537641 COL3A1P02461 1466 aaPredicted RBP15.38■□□□□ 0.05
CPSF7-218ENST00000537641 DLC1Q96QB1 1528 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 FTSJ3Q8IY81 847 aaKnown RBP15.37■□□□□ 0.05
CPSF7-218ENST00000537641 CABP2Q9NPB3 220 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 CHMP5Q9NZZ3 219 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 IL16Q14005 1332 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 MCM4P33991 863 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 STK26Q9P289 416 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 DDX19BQ9UMR2 479 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 MED14O60244 1454 aa15.37■□□□□ 0.05
CPSF7-218ENST00000537641 FSD2A1L4K1 749 aa15.36■□□□□ 0.05
CPSF7-218ENST00000537641 BCL2L13Q9BXK5 485 aa15.36■□□□□ 0.05
CPSF7-218ENST00000537641 C22orf23Q9BZE7 217 aa15.36■□□□□ 0.05
CPSF7-218ENST00000537641 TNNT2P45379 298 aaPredicted RBP15.35■□□□□ 0.05
CPSF7-218ENST00000537641 NCOA3Q9Y6Q9 1424 aa15.35■□□□□ 0.05
CPSF7-218ENST00000537641 A0A1W2PP64 1363 aa15.35■□□□□ 0.05
CPSF7-218ENST00000537641 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
CPSF7-218ENST00000537641 SAFB2Q14151 953 aaKnown RBP eCLIP15.34■□□□□ 0.05
CPSF7-218ENST00000537641 PRAM1Q96QH2 718 aa15.34■□□□□ 0.05
CPSF7-218ENST00000537641 KIF20BQ96Q89 1820 aa15.34■□□□□ 0.05
CPSF7-218ENST00000537641 GOLGA6L3A6NEY3 463 aa15.34■□□□□ 0.05
CPSF7-218ENST00000537641 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
CPSF7-218ENST00000537641 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
CPSF7-218ENST00000537641 SMC5Q8IY18 1101 aa15.34■□□□□ 0.05
CPSF7-218ENST00000537641 RIMS2Q9UQ26 1411 aa15.34■□□□□ 0.05
CPSF7-218ENST00000537641 CDC42BPGQ6DT37 1551 aa15.33■□□□□ 0.04
CPSF7-218ENST00000537641 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
CPSF7-218ENST00000537641 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
CPSF7-218ENST00000537641 CD163L1Q9NR16 1453 aa15.32■□□□□ 0.04
CPSF7-218ENST00000537641 MINK1Q8N4C8 1332 aaPredicted RBP15.32■□□□□ 0.04
CPSF7-218ENST00000537641 NRXN3Q9Y4C0 1643 aa15.32■□□□□ 0.04
CPSF7-218ENST00000537641 DDX11L8A8MPP1 907 aa15.31■□□□□ 0.04
CPSF7-218ENST00000537641 HSCBQ8IWL3 235 aa15.31■□□□□ 0.04
CPSF7-218ENST00000537641 TERF2IPQ9NYB0 399 aa15.31■□□□□ 0.04
CPSF7-218ENST00000537641 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
CPSF7-218ENST00000537641 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
CPSF7-218ENST00000537641 PLEKHF1Q96S99 279 aa15.31■□□□□ 0.04
CPSF7-218ENST00000537641 KNDC1Q76NI1 1749 aa15.3■□□□□ 0.04
CPSF7-218ENST00000537641 TRIM27P14373 513 aa15.3■□□□□ 0.04
CPSF7-218ENST00000537641 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
CPSF7-218ENST00000537641 RRAGDQ9NQL2 400 aaPredicted RBP15.3■□□□□ 0.04
CPSF7-218ENST00000537641 TMPOP42166 694 aaKnown RBP15.29■□□□□ 0.04
CPSF7-218ENST00000537641 EXOSC9Q06265 439 aaKnown RBP15.29■□□□□ 0.04
CPSF7-218ENST00000537641 SNX21Q969T3 373 aa15.29■□□□□ 0.04
CPSF7-218ENST00000537641 RBM25P49756 843 aaKnown RBP15.29■□□□□ 0.04
CPSF7-218ENST00000537641 SENP3Q9H4L4 574 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-218ENST00000537641 XRCC6P12956 609 aaKnown RBP eCLIP15.28■□□□□ 0.04
CPSF7-218ENST00000537641 ITPRIPQ8IWB1 547 aa15.28■□□□□ 0.04
CPSF7-218ENST00000537641 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.28■□□□□ 0.04
CPSF7-218ENST00000537641 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
CPSF7-218ENST00000537641 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
CPSF7-218ENST00000537641 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
CPSF7-218ENST00000537641 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
CPSF7-218ENST00000537641 IPO8O15397 1037 aaKnown RBP15.27■□□□□ 0.04
CPSF7-218ENST00000537641 TRAK2O60296 914 aa15.27■□□□□ 0.04
CPSF7-218ENST00000537641 PTMSP20962 102 aa15.27■□□□□ 0.04
CPSF7-218ENST00000537641 MRE11P49959 708 aa15.27■□□□□ 0.04
CPSF7-218ENST00000537641 MLECQ14165 292 aa15.27■□□□□ 0.04
CPSF7-218ENST00000537641 ALDH1L2Q3SY69 923 aa15.27■□□□□ 0.04
CPSF7-218ENST00000537641 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.04
CPSF7-218ENST00000537641 CDK19Q9BWU1 502 aa15.27■□□□□ 0.04
CPSF7-218ENST00000537641 TRIM35Q9UPQ4 493 aa15.27■□□□□ 0.04
CPSF7-218ENST00000537641 ATP7BP35670 1465 aa15.27■□□□□ 0.04
CPSF7-218ENST00000537641 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
CPSF7-218ENST00000537641 DDIT3P35638 169 aa15.26■□□□□ 0.03
CPSF7-218ENST00000537641 HDGFL2Q7Z4V5 671 aaPredicted RBP15.26■□□□□ 0.03
CPSF7-218ENST00000537641 UBE2Q2Q8WVN8 375 aa15.26■□□□□ 0.03
CPSF7-218ENST00000537641 ESF1Q9H501 851 aaKnown RBP15.26■□□□□ 0.03
CPSF7-218ENST00000537641 ZBTB40Q9NUA8 1239 aa15.26■□□□□ 0.03
CPSF7-218ENST00000537641 EIF5BO60841 1220 aaKnown RBP15.26■□□□□ 0.03
CPSF7-218ENST00000537641 UBR1Q8IWV7 1749 aa15.25■□□□□ 0.03
CPSF7-218ENST00000537641 NUCB1Q02818 461 aa15.25■□□□□ 0.03
CPSF7-218ENST00000537641 TMEM57Q8N5G2 664 aa15.25■□□□□ 0.03
CPSF7-218ENST00000537641 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
CPSF7-218ENST00000537641 CHMP4BQ9H444 224 aaKnown RBP15.25■□□□□ 0.03
CPSF7-218ENST00000537641 NOB1Q9ULX3 412 aaKnown RBP15.25■□□□□ 0.03
CPSF7-218ENST00000537641 FYB1O15117 783 aa15.24■□□□□ 0.03
CPSF7-218ENST00000537641 CLCN1P35523 988 aa15.24■□□□□ 0.03
CPSF7-218ENST00000537641 BRPF1P55201 1214 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-218ENST00000537641 GGNBP2Q9H3C7 697 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms