RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
CDH20-202ENST00000536675 GBP4Q96PP9 640 aa18.16■□□□□ 0.5
CDH20-202ENST00000536675 NUCB1Q02818 461 aa18.16■□□□□ 0.5
CDH20-202ENST00000536675 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
CDH20-202ENST00000536675 LNPKQ9C0E8 428 aa18.15■□□□□ 0.5
CDH20-202ENST00000536675 VSIG10Q8N0Z9 540 aa18.14■□□□□ 0.49
CDH20-202ENST00000536675 TRIM35Q9UPQ4 493 aa18.14■□□□□ 0.49
CDH20-202ENST00000536675 PKNOX2Q96KN3 472 aa18.14■□□□□ 0.49
CDH20-202ENST00000536675 EFCAB6Q5THR3 1501 aa18.13■□□□□ 0.49
CDH20-202ENST00000536675 SKOR2Q2VWA4 1001 aaPredicted RBP18.13■□□□□ 0.49
CDH20-202ENST00000536675 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
CDH20-202ENST00000536675 KIF2CQ99661 725 aa18.13■□□□□ 0.49
CDH20-202ENST00000536675 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
CDH20-202ENST00000536675 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
CDH20-202ENST00000536675 TMEM132EQ6IEE7 984 aa18.12■□□□□ 0.49
CDH20-202ENST00000536675 ADGRB1O14514 1584 aa18.12■□□□□ 0.49
CDH20-202ENST00000536675 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
CDH20-202ENST00000536675 CHD1LQ86WJ1 897 aa18.12■□□□□ 0.49
CDH20-202ENST00000536675 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
CDH20-202ENST00000536675 C14orf93Q9H972 538 aaKnown RBP18.11■□□□□ 0.49
CDH20-202ENST00000536675 FOXD4L1Q9NU39 408 aa18.11■□□□□ 0.49
CDH20-202ENST00000536675 PPLO60437 1756 aa18.11■□□□□ 0.49
CDH20-202ENST00000536675 CFAP74Q9C0B2 1584 aa18.11■□□□□ 0.49
CDH20-202ENST00000536675 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
CDH20-202ENST00000536675 ARAP3Q8WWN8 1544 aa18.11■□□□□ 0.49
CDH20-202ENST00000536675 CFAP65Q6ZU64 1925 aaKnown RBP18.1■□□□□ 0.49
CDH20-202ENST00000536675 NSD2O96028 1365 aa18.1■□□□□ 0.49
CDH20-202ENST00000536675 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
CDH20-202ENST00000536675 ZMYND15Q9H091 742 aa18.1■□□□□ 0.49
CDH20-202ENST00000536675 PTMSP20962 102 aa18.09■□□□□ 0.49
CDH20-202ENST00000536675 BMP2KLQ5H9B9 411 aa18.09■□□□□ 0.49
CDH20-202ENST00000536675 ABCC11Q96J66 1382 aa18.09■□□□□ 0.49
CDH20-202ENST00000536675 AK9Q5TCS8 1911 aa18.09■□□□□ 0.49
CDH20-202ENST00000536675 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
CDH20-202ENST00000536675 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.48
CDH20-202ENST00000536675 IL16Q14005 1332 aa18.07■□□□□ 0.48
CDH20-202ENST00000536675 KIF16BQ96L93 1317 aa18.07■□□□□ 0.48
CDH20-202ENST00000536675 K7ELQ4 463 aaPredicted RBP18.07■□□□□ 0.48
CDH20-202ENST00000536675 SSFA2P28290 1259 aa18.06■□□□□ 0.48
CDH20-202ENST00000536675 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
CDH20-202ENST00000536675 TULP4Q9NRJ4 1543 aa18.06■□□□□ 0.48
CDH20-202ENST00000536675 FANCAO15360 1455 aa18.06■□□□□ 0.48
CDH20-202ENST00000536675 TPM2P07951 284 aa18.06■□□□□ 0.48
CDH20-202ENST00000536675 CCDC173Q0VFZ6 552 aa18.05■□□□□ 0.48
CDH20-202ENST00000536675 PPP1R9BQ96SB3 815 aa18.05■□□□□ 0.48
CDH20-202ENST00000536675 COL3A1P02461 1466 aaPredicted RBP18.05■□□□□ 0.48
CDH20-202ENST00000536675 UHRF1BP1LA0JNW5 1464 aa18.05■□□□□ 0.48
CDH20-202ENST00000536675 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
CDH20-202ENST00000536675 RIPK4P57078 832 aa18.05■□□□□ 0.48
CDH20-202ENST00000536675 ANKRD45Q5TZF3 282 aa18.05■□□□□ 0.48
CDH20-202ENST00000536675 TBC1D9Q6ZT07 1266 aa18.05■□□□□ 0.48
CDH20-202ENST00000536675 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
CDH20-202ENST00000536675 NASPP49321 788 aaPredicted RBP18.04■□□□□ 0.48
CDH20-202ENST00000536675 PPIP5K1Q6PFW1 1433 aa18.03■□□□□ 0.48
CDH20-202ENST00000536675 CABP2Q9NPB3 220 aa18.03■□□□□ 0.48
CDH20-202ENST00000536675 ARHGEF28Q8N1W1 1705 aaKnown RBP18.03■□□□□ 0.48
CDH20-202ENST00000536675 ABCA9Q8IUA7 1624 aa18.03■□□□□ 0.48
CDH20-202ENST00000536675 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
CDH20-202ENST00000536675 ALDH1L2Q3SY69 923 aa18.02■□□□□ 0.48
CDH20-202ENST00000536675 CLEC17AQ6ZS10 378 aa18.02■□□□□ 0.48
CDH20-202ENST00000536675 GLI2P10070 1586 aa18.02■□□□□ 0.48
CDH20-202ENST00000536675 MED14O60244 1454 aa18.02■□□□□ 0.47
CDH20-202ENST00000536675 KIAA1211Q6ZU35 1233 aa18.01■□□□□ 0.47
CDH20-202ENST00000536675 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
CDH20-202ENST00000536675 GOLGA6L22H0YM25 854 aa18.01■□□□□ 0.47
CDH20-202ENST00000536675 BAG4O95429 457 aaKnown RBP18.01■□□□□ 0.47
CDH20-202ENST00000536675 KLHL40Q2TBA0 621 aa18.01■□□□□ 0.47
CDH20-202ENST00000536675 LMTK2Q8IWU2 1503 aa18.01■□□□□ 0.47
CDH20-202ENST00000536675 ZSCAN30Q86W11 494 aa18.01■□□□□ 0.47
CDH20-202ENST00000536675 GCC1Q96CN9 775 aa18.01■□□□□ 0.47
CDH20-202ENST00000536675 C1orf115Q9H7X2 142 aa18.01■□□□□ 0.47
CDH20-202ENST00000536675 DDX49Q9Y6V7 483 aaKnown RBP18.01■□□□□ 0.47
CDH20-202ENST00000536675 ZBTB7BO15156 539 aaPredicted RBP18■□□□□ 0.47
CDH20-202ENST00000536675 IBTKQ9P2D0 1353 aaPredicted RBP18■□□□□ 0.47
CDH20-202ENST00000536675 A0A1W2PP64 1363 aa17.99■□□□□ 0.47
CDH20-202ENST00000536675 KIDINS220Q9ULH0 1771 aa17.98■□□□□ 0.47
CDH20-202ENST00000536675 ANP32BQ92688 251 aaKnown RBP17.97■□□□□ 0.47
CDH20-202ENST00000536675 OFD1O75665 1012 aa17.97■□□□□ 0.47
CDH20-202ENST00000536675 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
CDH20-202ENST00000536675 SIRT2Q8IXJ6 389 aa17.97■□□□□ 0.47
CDH20-202ENST00000536675 PDCL3Q9H2J4 239 aa17.97■□□□□ 0.47
CDH20-202ENST00000536675 ARHGAP31Q2M1Z3 1444 aa17.96■□□□□ 0.47
CDH20-202ENST00000536675 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.47
CDH20-202ENST00000536675 SAFB2Q14151 953 aaKnown RBP eCLIP17.96■□□□□ 0.47
CDH20-202ENST00000536675 NPATQ14207 1427 aa17.96■□□□□ 0.47
CDH20-202ENST00000536675 CDC45O75419 566 aa17.95■□□□□ 0.46
CDH20-202ENST00000536675 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
CDH20-202ENST00000536675 CAMSAP1Q5T5Y3 1602 aa17.95■□□□□ 0.46
CDH20-202ENST00000536675 RPGRIP1LQ68CZ1 1315 aa17.95■□□□□ 0.46
CDH20-202ENST00000536675 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
CDH20-202ENST00000536675 MSNP26038 577 aaKnown RBP17.94■□□□□ 0.46
CDH20-202ENST00000536675 ZNF445P59923 1031 aa17.94■□□□□ 0.46
CDH20-202ENST00000536675 FYB1O15117 783 aa17.94■□□□□ 0.46
CDH20-202ENST00000536675 MCTP1Q6DN14 999 aa17.94■□□□□ 0.46
CDH20-202ENST00000536675 MRPL50Q8N5N7 158 aaKnown RBP17.94■□□□□ 0.46
CDH20-202ENST00000536675 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
CDH20-202ENST00000536675 GSPT1P15170 499 aaKnown RBP17.93■□□□□ 0.46
CDH20-202ENST00000536675 CAVIN1Q6NZI2 390 aaKnown RBP17.93■□□□□ 0.46
CDH20-202ENST00000536675 PTCH1Q13635 1447 aa17.92■□□□□ 0.46
CDH20-202ENST00000536675 REREQ9P2R6 1566 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms