RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 BECN2A8MW95 431 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 GOLGA6L9A6NEM1 432 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 PSMA5P28066 241 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 RAB3GAP1Q15042 981 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 CLEC17AQ6ZS10 378 aa4.88□□□□□ -1.63
SOX6-217ENST00000533870 PTPRKQ15262 1439 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 GOLGA6L19H0YKK7 550 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 AMER1Q5JTC6 1135 aaPredicted RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 CCDC73Q6ZRK6 1079 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 CC2D2AQ9P2K1 1620 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 ANKRD36BQ8N2N9 1353 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 ARXQ96QS3 562 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 DDX19AQ9NUU7 478 aaKnown RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 COL17A1Q9UMD9 1497 aaPredicted RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 CTAGE5O15320 804 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 PLIN1O60240 522 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 KCNJ4P48050 445 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 RTF1Q92541 710 aaKnown RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 CGNQ9P2M7 1197 aaKnown RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 ZNF521Q96K83 1311 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 ERLIN1O75477 346 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 CCT4P50991 539 aaKnown RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 DDX11Q96FC9 970 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 R3HCC1Q9Y3T6 440 aaKnown RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 POTEB2H3BUK9 544 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 SLC4A3P48751 1232 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 NBPF1Q3BBV0 1214 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 JAKMIP3Q5VZ66 844 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 TESK2Q96S53 571 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 PAXBP1Q9Y5B6 917 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 FILIP1Q7Z7B0 1213 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 CHD1LQ86WJ1 897 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 TICAM2Q86XR7 235 aa4.87□□□□□ -1.63
SOX6-217ENST00000533870 ATF5Q9Y2D1 282 aaPredicted RBP4.87□□□□□ -1.63
SOX6-217ENST00000533870 BRPF1P55201 1214 aaPredicted RBP4.86□□□□□ -1.63
SOX6-217ENST00000533870 KRT32Q14532 448 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 NPHP3Q7Z494 1330 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 CDR1P51861 262 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 GSDMDP57764 484 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 ANKRD45Q5TZF3 282 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 ERC1Q8IUD2 1116 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 CUL7Q14999 1698 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 PRAG1Q86YV5 1406 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 KRT85P78386 507 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 HSP90B2PQ58FF3 399 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 CEP57L1Q8IYX8 460 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 CCDC94Q9BW85 323 aaPredicted RBP4.86□□□□□ -1.63
SOX6-217ENST00000533870 SMC3Q9UQE7 1217 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 DRC7Q8IY82 874 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 ZMYND15Q9H091 742 aa4.86□□□□□ -1.63
SOX6-217ENST00000533870 HOOK1Q9UJC3 728 aaKnown RBP4.86□□□□□ -1.63
SOX6-217ENST00000533870 CCDC70Q6NSX1 233 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 TRMT2AQ8IZ69 625 aaKnown RBP4.85□□□□□ -1.63
SOX6-217ENST00000533870 JMYQ8N9B5 988 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 TNPO1Q92973 898 aaKnown RBP4.85□□□□□ -1.63
SOX6-217ENST00000533870 V9GYY5 206 aaPredicted RBP4.85□□□□□ -1.63
SOX6-217ENST00000533870 SRPK2P78362 688 aaKnown RBP4.85□□□□□ -1.63
SOX6-217ENST00000533870 FGD1P98174 961 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.85□□□□□ -1.63
SOX6-217ENST00000533870 AK7Q96M32 723 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 FAM135AQ9P2D6 1515 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 KIF3BO15066 747 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 LRSAM1Q6UWE0 723 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 ATP10AO60312 1499 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 KDM5DQ9BY66 1539 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 A6NNZ2 444 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 TUBB8Q3ZCM7 444 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.85□□□□□ -1.63
SOX6-217ENST00000533870 CCDC171Q6TFL3 1326 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 BAG4O95429 457 aaKnown RBP4.85□□□□□ -1.63
SOX6-217ENST00000533870 TXLNBQ8N3L3 684 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 MNS1Q8NEH6 495 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 IFT57Q9NWB7 429 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 AOX1Q06278 1338 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 EIF3JO75822 258 aaKnown RBP4.85□□□□□ -1.63
SOX6-217ENST00000533870 CCDC183Q5T5S1 534 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 ATL3Q6DD88 541 aa4.85□□□□□ -1.63
SOX6-217ENST00000533870 SETQ01105 290 aaPredicted RBP4.84□□□□□ -1.63
SOX6-217ENST00000533870 PANK1Q8TE04 598 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 ADGRL1O94910 1474 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 RAD54L2Q9Y4B4 1467 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 MYO1BO43795 1136 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 SF3B2Q13435 895 aaKnown RBP4.84□□□□□ -1.63
SOX6-217ENST00000533870 RAD50Q92878 1312 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 SSH2Q76I76 1423 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 CBFA2T2O43439 604 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 ATP8B1O43520 1251 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 RIPK4P57078 832 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 PLCB2Q00722 1185 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 BMS1Q14692 1282 aaKnown RBP4.84□□□□□ -1.63
SOX6-217ENST00000533870 ZNF771Q7L3S4 317 aaPredicted RBP4.84□□□□□ -1.63
SOX6-217ENST00000533870 FAM200AQ8TCP9 573 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 ZNF692Q9BU19 519 aaPredicted RBP4.84□□□□□ -1.63
SOX6-217ENST00000533870 UQCRHLA0A096LP55 91 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 UQCRHP07919 91 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 EXOSC9Q06265 439 aaKnown RBP4.84□□□□□ -1.63
SOX6-217ENST00000533870 BABAM1Q9NWV8 329 aa4.84□□□□□ -1.63
SOX6-217ENST00000533870 PLEKHG5O94827 1062 aa4.84□□□□□ -1.64
SOX6-217ENST00000533870 TUBB2AQ13885 445 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms