RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CABP2Q9NPB3 220 aa21.05■□□□□ 0.96
CTSB-228ENST00000533455 ARHGAP31Q2M1Z3 1444 aa21.05■□□□□ 0.96
CTSB-228ENST00000533455 NPM1P06748 294 aaKnown RBP eCLIP21.05■□□□□ 0.96
CTSB-228ENST00000533455 ATF7IPQ6VMQ6 1270 aa21.04■□□□□ 0.96
CTSB-228ENST00000533455 SMC5Q8IY18 1101 aa21.04■□□□□ 0.96
CTSB-228ENST00000533455 SSH1Q8WYL5 1049 aa21.04■□□□□ 0.96
CTSB-228ENST00000533455 C22orf23Q9BZE7 217 aa21.04■□□□□ 0.96
CTSB-228ENST00000533455 CDC42BPGQ6DT37 1551 aa21.04■□□□□ 0.96
CTSB-228ENST00000533455 KIF20BQ96Q89 1820 aa21.03■□□□□ 0.96
CTSB-228ENST00000533455 ATAD2Q6PL18 1390 aa21.02■□□□□ 0.96
CTSB-228ENST00000533455 PTPRMP28827 1452 aa21.02■□□□□ 0.96
CTSB-228ENST00000533455 MYO5BQ9ULV0 1848 aa21.02■□□□□ 0.96
CTSB-228ENST00000533455 CD163L1Q9NR16 1453 aa21.01■□□□□ 0.95
CTSB-228ENST00000533455 DIP2CQ9Y2E4 1556 aa21.01■□□□□ 0.95
CTSB-228ENST00000533455 ITPRIPQ8IWB1 547 aa21■□□□□ 0.95
CTSB-228ENST00000533455 KIF16BQ96L93 1317 aa21■□□□□ 0.95
CTSB-228ENST00000533455 U2SURPO15042 1029 aaKnown RBP21■□□□□ 0.95
CTSB-228ENST00000533455 MCM4P33991 863 aa21■□□□□ 0.95
CTSB-228ENST00000533455 CHMP5Q9NZZ3 219 aa21■□□□□ 0.95
CTSB-228ENST00000533455 PNPLA6Q8IY17 1366 aa20.99■□□□□ 0.95
CTSB-228ENST00000533455 CYB5RLQ6IPT4 315 aa20.99■□□□□ 0.95
CTSB-228ENST00000533455 MFAP1P55081 439 aaKnown RBP20.99■□□□□ 0.95
CTSB-228ENST00000533455 ZBTB40Q9NUA8 1239 aa20.99■□□□□ 0.95
CTSB-228ENST00000533455 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.99■□□□□ 0.95
CTSB-228ENST00000533455 NOB1Q9ULX3 412 aaKnown RBP20.99■□□□□ 0.95
CTSB-228ENST00000533455 NCOA3Q9Y6Q9 1424 aa20.98■□□□□ 0.95
CTSB-228ENST00000533455 GGNBP2Q9H3C7 697 aa20.97■□□□□ 0.95
CTSB-228ENST00000533455 TMEM131LA2VDJ0 1609 aa20.97■□□□□ 0.95
CTSB-228ENST00000533455 FSD2A1L4K1 749 aa20.97■□□□□ 0.95
CTSB-228ENST00000533455 IPO8O15397 1037 aaKnown RBP20.97■□□□□ 0.95
CTSB-228ENST00000533455 ALDH1L2Q3SY69 923 aa20.97■□□□□ 0.95
CTSB-228ENST00000533455 TMEM57Q8N5G2 664 aa20.97■□□□□ 0.95
CTSB-228ENST00000533455 PNNQ9H307 717 aaKnown RBP20.97■□□□□ 0.95
CTSB-228ENST00000533455 FYB1O15117 783 aa20.96■□□□□ 0.95
CTSB-228ENST00000533455 NUTM2DQ5VT03 806 aaPredicted RBP20.96■□□□□ 0.95
CTSB-228ENST00000533455 TERF2IPQ9NYB0 399 aa20.96■□□□□ 0.95
CTSB-228ENST00000533455 NEO1Q92859 1461 aa20.96■□□□□ 0.95
CTSB-228ENST00000533455 LRRC7Q96NW7 1537 aa20.96■□□□□ 0.95
CTSB-228ENST00000533455 PREX1Q8TCU6 1659 aa20.95■□□□□ 0.94
CTSB-228ENST00000533455 PPIP5K1Q6PFW1 1433 aa20.95■□□□□ 0.94
CTSB-228ENST00000533455 SRPK2P78362 688 aaKnown RBP20.95■□□□□ 0.94
CTSB-228ENST00000533455 BRPF1P55201 1214 aaPredicted RBP20.94■□□□□ 0.94
CTSB-228ENST00000533455 RIPK4P57078 832 aa20.94■□□□□ 0.94
CTSB-228ENST00000533455 NUCB1Q02818 461 aa20.94■□□□□ 0.94
CTSB-228ENST00000533455 DIAPH1O60610 1272 aaKnown RBP20.94■□□□□ 0.94
CTSB-228ENST00000533455 RBM25P49756 843 aaKnown RBP20.94■□□□□ 0.94
CTSB-228ENST00000533455 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
CTSB-228ENST00000533455 HSCBQ8IWL3 235 aa20.93■□□□□ 0.94
CTSB-228ENST00000533455 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
CTSB-228ENST00000533455 SAFB2Q14151 953 aaKnown RBP eCLIP20.92■□□□□ 0.94
CTSB-228ENST00000533455 ZNF428Q96B54 188 aa20.92■□□□□ 0.94
CTSB-228ENST00000533455 SLC52A1Q9NWF4 448 aa20.92■□□□□ 0.94
CTSB-228ENST00000533455 FAM135BQ49AJ0 1406 aa20.92■□□□□ 0.94
CTSB-228ENST00000533455 YTHDC2Q9H6S0 1430 aaKnown RBP20.92■□□□□ 0.94
CTSB-228ENST00000533455 GOLGA6L3A6NEY3 463 aa20.92■□□□□ 0.94
CTSB-228ENST00000533455 IDI1Q13907 227 aa20.92■□□□□ 0.94
CTSB-228ENST00000533455 SNX21Q969T3 373 aa20.92■□□□□ 0.94
CTSB-228ENST00000533455 DDIT3P35638 169 aa20.91■□□□□ 0.94
CTSB-228ENST00000533455 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
CTSB-228ENST00000533455 RICTORQ6R327 1708 aa20.91■□□□□ 0.94
CTSB-228ENST00000533455 RIMBP3CA6NJZ7 1639 aa20.9■□□□□ 0.94
CTSB-228ENST00000533455 RIMBP3BA6NNM3 1639 aa20.9■□□□□ 0.94
CTSB-228ENST00000533455 RIMBP3Q9UFD9 1639 aa20.9■□□□□ 0.94
CTSB-228ENST00000533455 ARHGEF40Q8TER5 1519 aa20.9■□□□□ 0.94
CTSB-228ENST00000533455 REREQ9P2R6 1566 aa20.89■□□□□ 0.94
CTSB-228ENST00000533455 FCHSD2O94868 740 aa20.89■□□□□ 0.93
CTSB-228ENST00000533455 XRCC6P12956 609 aaKnown RBP eCLIP20.89■□□□□ 0.938e-11■■□□□ 11.5
CTSB-228ENST00000533455 PIK3R4Q99570 1358 aa20.89■□□□□ 0.93
CTSB-228ENST00000533455 STK26Q9P289 416 aa20.88■□□□□ 0.93
CTSB-228ENST00000533455 PTCH1Q13635 1447 aa20.88■□□□□ 0.93
CTSB-228ENST00000533455 DDX11L8A8MPP1 907 aa20.88■□□□□ 0.93
CTSB-228ENST00000533455 TRAK2O60296 914 aa20.88■□□□□ 0.93
CTSB-228ENST00000533455 PRKCSHP14314 528 aaPredicted RBP20.88■□□□□ 0.93
CTSB-228ENST00000533455 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
CTSB-228ENST00000533455 CHD1LQ86WJ1 897 aa20.88■□□□□ 0.93
CTSB-228ENST00000533455 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
CTSB-228ENST00000533455 MINK1Q8N4C8 1332 aaPredicted RBP20.87■□□□□ 0.93
CTSB-228ENST00000533455 BMP2KLQ5H9B9 411 aa20.87■□□□□ 0.93
CTSB-228ENST00000533455 RRAGDQ9NQL2 400 aaPredicted RBP20.87■□□□□ 0.93
CTSB-228ENST00000533455 PRAM1Q96QH2 718 aa20.86■□□□□ 0.93
CTSB-228ENST00000533455 CHMP4BQ9H444 224 aaKnown RBP20.86■□□□□ 0.93
CTSB-228ENST00000533455 CIZ1Q9ULV3 898 aaPredicted RBP20.85■□□□□ 0.93
CTSB-228ENST00000533455 ARHGAP45Q92619 1136 aa20.85■□□□□ 0.93
CTSB-228ENST00000533455 ATP7BP35670 1465 aa20.85■□□□□ 0.93
CTSB-228ENST00000533455 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
CTSB-228ENST00000533455 LNPKQ9C0E8 428 aa20.84■□□□□ 0.93
CTSB-228ENST00000533455 MAP2P11137 1827 aaKnown RBP20.84■□□□□ 0.93
CTSB-228ENST00000533455 DLC1Q96QB1 1528 aa20.84■□□□□ 0.93
CTSB-228ENST00000533455 ISY1Q9ULR0 285 aaKnown RBP20.83■□□□□ 0.93
CTSB-228ENST00000533455 ZBTB7BO15156 539 aaPredicted RBP20.82■□□□□ 0.92
CTSB-228ENST00000533455 MRE11P49959 708 aa20.82■□□□□ 0.92
CTSB-228ENST00000533455 RAPGEF3O95398 923 aa20.81■□□□□ 0.92
CTSB-228ENST00000533455 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
CTSB-228ENST00000533455 MRPL50Q8N5N7 158 aaKnown RBP20.81■□□□□ 0.92
CTSB-228ENST00000533455 CDK19Q9BWU1 502 aa20.81■□□□□ 0.92
CTSB-228ENST00000533455 CALD1Q05682 793 aaKnown RBP20.8■□□□□ 0.92
CTSB-228ENST00000533455 NFE2L2Q16236 605 aa20.8■□□□□ 0.92
CTSB-228ENST00000533455 GZF1Q9H116 711 aaPredicted RBP20.8■□□□□ 0.92
CTSB-228ENST00000533455 VAMP4O75379 141 aa20.79■□□□□ 0.92
CTSB-228ENST00000533455 ABCC4O15439 1325 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms