RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 PTPRMP28827 1452 aa18.79■□□□□ 0.6
CAPN1-224ENST00000533129 IQSEC2Q5JU85 1478 aa18.79■□□□□ 0.6
CAPN1-224ENST00000533129 SETD1AO15047 1707 aaKnown RBP18.78■□□□□ 0.6
CAPN1-224ENST00000533129 GOLGA6L3A6NEY3 463 aa18.78■□□□□ 0.6
CAPN1-224ENST00000533129 PCDHB15Q9Y5E8 787 aa18.78■□□□□ 0.6
CAPN1-224ENST00000533129 PDZRN3Q9UPQ7 1066 aa18.77■□□□□ 0.6
CAPN1-224ENST00000533129 TMEM2Q9UHN6 1383 aa18.77■□□□□ 0.6
CAPN1-224ENST00000533129 EVC2Q86UK5 1308 aa18.77■□□□□ 0.6
CAPN1-224ENST00000533129 XRCC6P12956 609 aaKnown RBP eCLIP18.76■□□□□ 0.59
CAPN1-224ENST00000533129 MCM4P33991 863 aa18.76■□□□□ 0.59
CAPN1-224ENST00000533129 NRXN3Q9Y4C0 1643 aa18.76■□□□□ 0.59
CAPN1-224ENST00000533129 DLC1Q96QB1 1528 aa18.76■□□□□ 0.59
CAPN1-224ENST00000533129 TULP4Q9NRJ4 1543 aa18.76■□□□□ 0.59
CAPN1-224ENST00000533129 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
CAPN1-224ENST00000533129 RWDD1Q9H446 243 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-224ENST00000533129 STK26Q9P289 416 aa18.76■□□□□ 0.59
CAPN1-224ENST00000533129 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-224ENST00000533129 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-224ENST00000533129 RLBP1P12271 317 aa18.73■□□□□ 0.59
CAPN1-224ENST00000533129 WDR63Q8IWG1 891 aa18.73■□□□□ 0.59
CAPN1-224ENST00000533129 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
CAPN1-224ENST00000533129 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-224ENST00000533129 CLCN1P35523 988 aa18.72■□□□□ 0.59
CAPN1-224ENST00000533129 CHMP5Q9NZZ3 219 aa18.72■□□□□ 0.59
CAPN1-224ENST00000533129 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
CAPN1-224ENST00000533129 ABCC11Q96J66 1382 aa18.7■□□□□ 0.58
CAPN1-224ENST00000533129 CCDC27Q2M243 656 aa18.7■□□□□ 0.58
CAPN1-224ENST00000533129 SLIT1O75093 1534 aa18.69■□□□□ 0.58
CAPN1-224ENST00000533129 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
CAPN1-224ENST00000533129 USP32Q8NFA0 1604 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 PLEKHG1Q9ULL1 1385 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 MRE11P49959 708 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 C22orf23Q9BZE7 217 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 TNNQ9UQP3 1299 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 KNDC1Q76NI1 1749 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 TRAK2O60296 914 aa18.68■□□□□ 0.58
CAPN1-224ENST00000533129 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
CAPN1-224ENST00000533129 ISY1Q9ULR0 285 aaKnown RBP18.68■□□□□ 0.58
CAPN1-224ENST00000533129 MVPQ14764 893 aaKnown RBP18.67■□□□□ 0.58
CAPN1-224ENST00000533129 PANK2Q9BZ23 570 aa18.66■□□□□ 0.58
CAPN1-224ENST00000533129 RIMS1Q86UR5 1692 aaKnown RBP18.66■□□□□ 0.58
CAPN1-224ENST00000533129 METP08581 1390 aa18.66■□□□□ 0.58
CAPN1-224ENST00000533129 ATAD2Q6PL18 1390 aa18.66■□□□□ 0.58
CAPN1-224ENST00000533129 TECPR2O15040 1411 aa18.66■□□□□ 0.58
CAPN1-224ENST00000533129 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
CAPN1-224ENST00000533129 DDX11L8A8MPP1 907 aa18.65■□□□□ 0.58
CAPN1-224ENST00000533129 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
CAPN1-224ENST00000533129 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
CAPN1-224ENST00000533129 SLC12A5Q9H2X9 1139 aa18.65■□□□□ 0.58
CAPN1-224ENST00000533129 ADAMTSL3P82987 1691 aa18.65■□□□□ 0.58
CAPN1-224ENST00000533129 NCOA3Q9Y6Q9 1424 aa18.65■□□□□ 0.58
CAPN1-224ENST00000533129 MORC1Q86VD1 984 aa18.64■□□□□ 0.58
CAPN1-224ENST00000533129 GZF1Q9H116 711 aaPredicted RBP18.64■□□□□ 0.58
CAPN1-224ENST00000533129 MYH16Q9H6N6 1097 aa18.64■□□□□ 0.58
CAPN1-224ENST00000533129 EID1Q9Y6B2 187 aa18.64■□□□□ 0.58
CAPN1-224ENST00000533129 MINK1Q8N4C8 1332 aaPredicted RBP18.64■□□□□ 0.58
CAPN1-224ENST00000533129 ANKRD36BQ8N2N9 1353 aa18.64■□□□□ 0.58
CAPN1-224ENST00000533129 ADAMTS13Q76LX8 1427 aa18.64■□□□□ 0.58
CAPN1-224ENST00000533129 ARXQ96QS3 562 aa18.64■□□□□ 0.57
CAPN1-224ENST00000533129 CPS1P31327 1500 aa18.64■□□□□ 0.57
CAPN1-224ENST00000533129 SPRYD3Q8NCJ5 442 aa18.64■□□□□ 0.57
CAPN1-224ENST00000533129 SIRT1Q96EB6 747 aa18.64■□□□□ 0.57
CAPN1-224ENST00000533129 NAP1L5Q96NT1 182 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-224ENST00000533129 BCL2L13Q9BXK5 485 aa18.64■□□□□ 0.57
CAPN1-224ENST00000533129 CABP2Q9NPB3 220 aa18.64■□□□□ 0.57
CAPN1-224ENST00000533129 FAM135BQ49AJ0 1406 aa18.64■□□□□ 0.57
CAPN1-224ENST00000533129 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
CAPN1-224ENST00000533129 GLIPR1L2Q4G1C9 344 aa18.63■□□□□ 0.57
CAPN1-224ENST00000533129 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
CAPN1-224ENST00000533129 ZKSCAN2Q63HK3 967 aa18.63■□□□□ 0.57
CAPN1-224ENST00000533129 TXNDC2Q86VQ3 553 aa18.63■□□□□ 0.57
CAPN1-224ENST00000533129 THEMISQ8N1K5 641 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-224ENST00000533129 CT47B1P0C2W7 299 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-224ENST00000533129 LTKP29376 864 aa18.62■□□□□ 0.57
CAPN1-224ENST00000533129 HSCBQ8IWL3 235 aa18.62■□□□□ 0.57
CAPN1-224ENST00000533129 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-224ENST00000533129 MFAP1P55081 439 aaKnown RBP18.61■□□□□ 0.57
CAPN1-224ENST00000533129 HDAC1Q13547 482 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-224ENST00000533129 CEP170BQ9Y4F5 1589 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-224ENST00000533129 DZIP1LQ8IYY4 767 aaKnown RBP18.61■□□□□ 0.57
CAPN1-224ENST00000533129 GRPEL1Q9HAV7 217 aa18.61■□□□□ 0.57
CAPN1-224ENST00000533129 MED14O60244 1454 aa18.61■□□□□ 0.57
CAPN1-224ENST00000533129 FTSJ3Q8IY81 847 aaKnown RBP18.6■□□□□ 0.57
CAPN1-224ENST00000533129 DDIT3P35638 169 aa18.59■□□□□ 0.57
CAPN1-224ENST00000533129 CFAP53Q96M91 514 aa18.59■□□□□ 0.57
CAPN1-224ENST00000533129 WAPLQ7Z5K2 1190 aa18.59■□□□□ 0.57
CAPN1-224ENST00000533129 CDK19Q9BWU1 502 aa18.58■□□□□ 0.56
CAPN1-224ENST00000533129 NSD2O96028 1365 aa18.58■□□□□ 0.56
CAPN1-224ENST00000533129 DIP2AQ14689 1571 aa18.58■□□□□ 0.56
CAPN1-224ENST00000533129 RRP9O43818 475 aaKnown RBP18.57■□□□□ 0.56
CAPN1-224ENST00000533129 HSP90AA1P07900 732 aaKnown RBP18.57■□□□□ 0.56
CAPN1-224ENST00000533129 SNX21Q969T3 373 aa18.57■□□□□ 0.56
CAPN1-224ENST00000533129 ZNF142P52746 1687 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-224ENST00000533129 KCNA4P22459 653 aa18.56■□□□□ 0.56
CAPN1-224ENST00000533129 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
CAPN1-224ENST00000533129 SMC5Q8IY18 1101 aa18.56■□□□□ 0.56
CAPN1-224ENST00000533129 CIZ1Q9ULV3 898 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-224ENST00000533129 DDX19BQ9UMR2 479 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms