RNA–Protein interactions for RNA: ENST00000530704.6

PPT1-210, Transcript of palmitoyl-protein thioesterase 1, humanhuman

TSL 1 (best)

Gene PPT1, Length 2,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-210ENST00000530704 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.56■□□□□ 0.24
PPT1-210ENST00000530704 MORC1Q86VD1 984 aa16.56■□□□□ 0.24
PPT1-210ENST00000530704 KIF2CQ99661 725 aa16.56■□□□□ 0.24
PPT1-210ENST00000530704 CT47B1P0C2W7 299 aaPredicted RBP16.56■□□□□ 0.24
PPT1-210ENST00000530704 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
PPT1-210ENST00000530704 ZNF518AQ6AHZ1 1483 aa16.55■□□□□ 0.24
PPT1-210ENST00000530704 TRIM27P14373 513 aa16.55■□□□□ 0.24
PPT1-210ENST00000530704 CLEC17AQ6ZS10 378 aa16.55■□□□□ 0.24
PPT1-210ENST00000530704 IFT172Q9UG01 1749 aa16.55■□□□□ 0.24
PPT1-210ENST00000530704 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
PPT1-210ENST00000530704 MYOM2P54296 1465 aa16.54■□□□□ 0.24
PPT1-210ENST00000530704 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
PPT1-210ENST00000530704 NUCB1Q02818 461 aa16.53■□□□□ 0.24
PPT1-210ENST00000530704 KLHL40Q2TBA0 621 aa16.53■□□□□ 0.24
PPT1-210ENST00000530704 ANP32BQ92688 251 aaKnown RBP16.53■□□□□ 0.24
PPT1-210ENST00000530704 CD2BP2O95400 341 aaKnown RBP16.53■□□□□ 0.24
PPT1-210ENST00000530704 CHGAP10645 457 aaKnown RBP16.53■□□□□ 0.24
PPT1-210ENST00000530704 MSNP26038 577 aaKnown RBP16.53■□□□□ 0.24
PPT1-210ENST00000530704 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
PPT1-210ENST00000530704 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
PPT1-210ENST00000530704 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
PPT1-210ENST00000530704 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
PPT1-210ENST00000530704 GGT6Q6P531 493 aa16.52■□□□□ 0.24
PPT1-210ENST00000530704 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
PPT1-210ENST00000530704 K7ELQ4 463 aaPredicted RBP16.52■□□□□ 0.23
PPT1-210ENST00000530704 SSFA2P28290 1259 aa16.52■□□□□ 0.23
PPT1-210ENST00000530704 PRDM4Q9UKN5 801 aa16.52■□□□□ 0.23
PPT1-210ENST00000530704 FRMPD1Q5SYB0 1578 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 GOLGA6L22H0YM25 854 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 HS1BP3Q53T59 392 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 ATF7IPQ6VMQ6 1270 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 NOS1P29475 1434 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 LMTK2Q8IWU2 1503 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 RBM10P98175 930 aaKnown RBP16.51■□□□□ 0.23
PPT1-210ENST00000530704 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
PPT1-210ENST00000530704 MTHFSP49914 203 aa16.5■□□□□ 0.23
PPT1-210ENST00000530704 POGZQ7Z3K3 1410 aa16.5■□□□□ 0.23
PPT1-210ENST00000530704 SSH1Q8WYL5 1049 aa16.5■□□□□ 0.23
PPT1-210ENST00000530704 DDX49Q9Y6V7 483 aaKnown RBP16.5■□□□□ 0.23
PPT1-210ENST00000530704 NPATQ14207 1427 aa16.5■□□□□ 0.23
PPT1-210ENST00000530704 SBNO2Q9Y2G9 1366 aa16.5■□□□□ 0.23
PPT1-210ENST00000530704 ZNF445P59923 1031 aa16.5■□□□□ 0.23
PPT1-210ENST00000530704 BMP2KLQ5H9B9 411 aa16.5■□□□□ 0.23
PPT1-210ENST00000530704 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
PPT1-210ENST00000530704 BAG4O95429 457 aaKnown RBP16.49■□□□□ 0.23
PPT1-210ENST00000530704 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
PPT1-210ENST00000530704 LNPKQ9C0E8 428 aa16.49■□□□□ 0.23
PPT1-210ENST00000530704 NRXN1Q9ULB1 1477 aa16.49■□□□□ 0.23
PPT1-210ENST00000530704 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
PPT1-210ENST00000530704 CHD1LQ86WJ1 897 aa16.48■□□□□ 0.23
PPT1-210ENST00000530704 TMEM57Q8N5G2 664 aa16.48■□□□□ 0.23
PPT1-210ENST00000530704 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
PPT1-210ENST00000530704 CFAP53Q96M91 514 aa16.48■□□□□ 0.23
PPT1-210ENST00000530704 ADGRB3O60242 1522 aa16.48■□□□□ 0.23
PPT1-210ENST00000530704 ZNF500O60304 480 aaPredicted RBP16.48■□□□□ 0.23
PPT1-210ENST00000530704 NOB1Q9ULX3 412 aaKnown RBP16.48■□□□□ 0.23
PPT1-210ENST00000530704 NOL7Q9UMY1 257 aaKnown RBP16.47■□□□□ 0.23
PPT1-210ENST00000530704 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
PPT1-210ENST00000530704 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
PPT1-210ENST00000530704 PDLIM2Q96JY6 352 aa16.46■□□□□ 0.23
PPT1-210ENST00000530704 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
PPT1-210ENST00000530704 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.46■□□□□ 0.23
PPT1-210ENST00000530704 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.23
PPT1-210ENST00000530704 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
PPT1-210ENST00000530704 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
PPT1-210ENST00000530704 FAM13BQ9NYF5 915 aa16.46■□□□□ 0.23
PPT1-210ENST00000530704 HECW2Q9P2P5 1572 aa16.45■□□□□ 0.22
PPT1-210ENST00000530704 SLC12A5Q9H2X9 1139 aa16.45■□□□□ 0.22
PPT1-210ENST00000530704 TRAK1Q9UPV9 953 aa16.45■□□□□ 0.22
PPT1-210ENST00000530704 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
PPT1-210ENST00000530704 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
PPT1-210ENST00000530704 TMEM132EQ6IEE7 984 aa16.45■□□□□ 0.22
PPT1-210ENST00000530704 CFAP74Q9C0B2 1584 aa16.44■□□□□ 0.22
PPT1-210ENST00000530704 PPLO60437 1756 aa16.44■□□□□ 0.22
PPT1-210ENST00000530704 KIF16BQ96L93 1317 aa16.44■□□□□ 0.22
PPT1-210ENST00000530704 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
PPT1-210ENST00000530704 ZSCAN23Q3MJ62 389 aa16.43■□□□□ 0.22
PPT1-210ENST00000530704 NUTM2DQ5VT03 806 aaPredicted RBP16.43■□□□□ 0.22
PPT1-210ENST00000530704 RBSNQ9H1K0 784 aa16.42■□□□□ 0.22
PPT1-210ENST00000530704 USP32Q8NFA0 1604 aa16.42■□□□□ 0.22
PPT1-210ENST00000530704 UQCRHLA0A096LP55 91 aa16.42■□□□□ 0.22
PPT1-210ENST00000530704 UQCRHP07919 91 aa16.42■□□□□ 0.22
PPT1-210ENST00000530704 SIGLEC1Q9BZZ2 1709 aa16.42■□□□□ 0.22
PPT1-210ENST00000530704 ABCC3O15438 1527 aa16.41■□□□□ 0.22
PPT1-210ENST00000530704 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
PPT1-210ENST00000530704 CAVIN1Q6NZI2 390 aaKnown RBP16.41■□□□□ 0.22
PPT1-210ENST00000530704 C14orf93Q9H972 538 aaKnown RBP16.41■□□□□ 0.22
PPT1-210ENST00000530704 LMBRD1Q9NUN5 540 aa16.41■□□□□ 0.22
PPT1-210ENST00000530704 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
PPT1-210ENST00000530704 ABCC11Q96J66 1382 aa16.41■□□□□ 0.22
PPT1-210ENST00000530704 IPO8O15397 1037 aaKnown RBP16.41■□□□□ 0.22
PPT1-210ENST00000530704 MCTP1Q6DN14 999 aa16.41■□□□□ 0.22
PPT1-210ENST00000530704 SETBP1Q9Y6X0 1596 aa16.4■□□□□ 0.22
PPT1-210ENST00000530704 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
PPT1-210ENST00000530704 ADGRB1O14514 1584 aa16.4■□□□□ 0.22
PPT1-210ENST00000530704 DYNC1I1O14576 645 aa16.4■□□□□ 0.22
PPT1-210ENST00000530704 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms